RNA–Protein interactions for RNA: ENST00000296742.11

CAGE1-201, Transcript of cancer antigen 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAGE1, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAGE1-201ENST00000296742 SLIT1O75093 1534 aa15.49■□□□□ 0.07
CAGE1-201ENST00000296742 FOXO3O43524 673 aa15.49■□□□□ 0.07
CAGE1-201ENST00000296742 CCDC173Q0VFZ6 552 aa15.49■□□□□ 0.07
CAGE1-201ENST00000296742 C8orf58Q8NAV2 365 aa15.49■□□□□ 0.07
CAGE1-201ENST00000296742 AKAP12Q02952 1782 aa15.49■□□□□ 0.07
CAGE1-201ENST00000296742 LTV1Q96GA3 475 aaPredicted RBP15.49■□□□□ 0.07
CAGE1-201ENST00000296742 MIS18AQ9NYP9 233 aa15.49■□□□□ 0.07
CAGE1-201ENST00000296742 R3HCC1Q9Y3T6 440 aaKnown RBP15.48■□□□□ 0.07
CAGE1-201ENST00000296742 VAMP4O75379 141 aa15.47■□□□□ 0.07
CAGE1-201ENST00000296742 OFD1O75665 1012 aa15.47■□□□□ 0.07
CAGE1-201ENST00000296742 AMPHP49418 695 aa15.47■□□□□ 0.07
CAGE1-201ENST00000296742 ZBTB7CA1YPR0 619 aa15.47■□□□□ 0.07
CAGE1-201ENST00000296742 AAMPQ13685 434 aa15.47■□□□□ 0.07
CAGE1-201ENST00000296742 SKOR2Q2VWA4 1001 aaPredicted RBP15.47■□□□□ 0.07
CAGE1-201ENST00000296742 CT47B1P0C2W7 299 aaPredicted RBP15.46■□□□□ 0.07
CAGE1-201ENST00000296742 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.46■□□□□ 0.07
CAGE1-201ENST00000296742 ANKLE2Q86XL3 938 aa15.46■□□□□ 0.07
CAGE1-201ENST00000296742 PRDM4Q9UKN5 801 aa15.46■□□□□ 0.07
CAGE1-201ENST00000296742 OVOS2A0A0J9YW53 1432 aa15.46■□□□□ 0.07
CAGE1-201ENST00000296742 OVOS2Q6IE36 1432 aa15.46■□□□□ 0.07
CAGE1-201ENST00000296742 ABTB2Q8N961 1025 aa15.46■□□□□ 0.07
CAGE1-201ENST00000296742 GNAI1P63096 354 aa15.45■□□□□ 0.06
CAGE1-201ENST00000296742 XPCQ01831 940 aaPredicted RBP15.45■□□□□ 0.06
CAGE1-201ENST00000296742 TWISTNBQ3B726 338 aaPredicted RBP15.45■□□□□ 0.06
CAGE1-201ENST00000296742 C1orf115Q9H7X2 142 aa15.45■□□□□ 0.06
CAGE1-201ENST00000296742 DDIT3P35638 169 aa15.45■□□□□ 0.06
CAGE1-201ENST00000296742 RIMS1Q86UR5 1692 aaKnown RBP15.45■□□□□ 0.06
CAGE1-201ENST00000296742 DIP2AQ14689 1571 aa15.44■□□□□ 0.06
CAGE1-201ENST00000296742 RAB3GAP1Q15042 981 aa15.44■□□□□ 0.06
CAGE1-201ENST00000296742 IFT57Q9NWB7 429 aa15.44■□□□□ 0.06
CAGE1-201ENST00000296742 A0A0U1RQG5 324 aaPredicted RBP15.44■□□□□ 0.06
CAGE1-201ENST00000296742 CFAP44Q96MT7 982 aa15.44■□□□□ 0.06
CAGE1-201ENST00000296742 PPP1R9BQ96SB3 815 aa15.44■□□□□ 0.06
CAGE1-201ENST00000296742 SMC5Q8IY18 1101 aa15.43■□□□□ 0.06
CAGE1-201ENST00000296742 ZNF853P0CG23 659 aa15.43■□□□□ 0.06
CAGE1-201ENST00000296742 DDX19BQ9UMR2 479 aa15.43■□□□□ 0.06
CAGE1-201ENST00000296742 DDX49Q9Y6V7 483 aaKnown RBP15.43■□□□□ 0.06
CAGE1-201ENST00000296742 PTCH1Q13635 1447 aa15.43■□□□□ 0.06
CAGE1-201ENST00000296742 NCOA3Q9Y6Q9 1424 aa15.43■□□□□ 0.06
CAGE1-201ENST00000296742 DLG5Q8TDM6 1919 aa15.42■□□□□ 0.06
CAGE1-201ENST00000296742 ESCO1Q5FWF5 840 aa15.42■□□□□ 0.06
CAGE1-201ENST00000296742 SSH2Q76I76 1423 aa15.42■□□□□ 0.06
CAGE1-201ENST00000296742 EYA1Q99502 592 aa15.42■□□□□ 0.06
CAGE1-201ENST00000296742 PEAK1Q9H792 1746 aa15.42■□□□□ 0.06
CAGE1-201ENST00000296742 CEP170BQ9Y4F5 1589 aaPredicted RBP15.42■□□□□ 0.06
CAGE1-201ENST00000296742 KIF16BQ96L93 1317 aa15.42■□□□□ 0.06
CAGE1-201ENST00000296742 IPO8O15397 1037 aaKnown RBP15.42■□□□□ 0.06
CAGE1-201ENST00000296742 USHBP1Q8N6Y0 703 aa15.42■□□□□ 0.06
CAGE1-201ENST00000296742 CIZ1Q9ULV3 898 aaPredicted RBP15.42■□□□□ 0.06
CAGE1-201ENST00000296742 TOPAZ1Q8N9V7 1692 aa15.42■□□□□ 0.06
CAGE1-201ENST00000296742 MRPL50Q8N5N7 158 aaKnown RBP15.41■□□□□ 0.06
CAGE1-201ENST00000296742 GOLGA6L22H0YM25 854 aa15.41■□□□□ 0.06
CAGE1-201ENST00000296742 SSFA2P28290 1259 aa15.41■□□□□ 0.06
CAGE1-201ENST00000296742 MTHFSDQ2M296 383 aaKnown RBP15.41■□□□□ 0.06
CAGE1-201ENST00000296742 NRKQ7Z2Y5 1582 aa15.41■□□□□ 0.06
CAGE1-201ENST00000296742 ALDH1L2Q3SY69 923 aa15.4■□□□□ 0.06
CAGE1-201ENST00000296742 SNX21Q969T3 373 aa15.4■□□□□ 0.06
CAGE1-201ENST00000296742 SETD1BQ9UPS6 1966 aaKnown RBP15.4■□□□□ 0.06
CAGE1-201ENST00000296742 TTC21AQ8NDW8 1320 aa15.4■□□□□ 0.06
CAGE1-201ENST00000296742 UQCRHLA0A096LP55 91 aa15.4■□□□□ 0.06
CAGE1-201ENST00000296742 UQCRHP07919 91 aa15.4■□□□□ 0.06
CAGE1-201ENST00000296742 NCLP19338 710 aaKnown RBP15.4■□□□□ 0.06
CAGE1-201ENST00000296742 LMOD3Q0VAK6 560 aa15.4■□□□□ 0.06
CAGE1-201ENST00000296742 LMOD2Q6P5Q4 547 aa15.4■□□□□ 0.06
CAGE1-201ENST00000296742 ZBTB40Q9NUA8 1239 aa15.4■□□□□ 0.06
CAGE1-201ENST00000296742 PTMSP20962 102 aa15.39■□□□□ 0.06
CAGE1-201ENST00000296742 USP31Q70CQ4 1352 aa15.39■□□□□ 0.05
CAGE1-201ENST00000296742 CD2BP2O95400 341 aaKnown RBP15.39■□□□□ 0.05
CAGE1-201ENST00000296742 RBM25P49756 843 aaKnown RBP15.39■□□□□ 0.05
CAGE1-201ENST00000296742 PHF8Q9UPP1 1060 aa15.39■□□□□ 0.05
CAGE1-201ENST00000296742 MAP7D2Q96T17 732 aa15.39■□□□□ 0.05
CAGE1-201ENST00000296742 ORAI2Q96SN7 254 aa15.38■□□□□ 0.05
CAGE1-201ENST00000296742 PSME1Q06323 249 aa15.37■□□□□ 0.05
CAGE1-201ENST00000296742 PRDM10Q9NQV6 1147 aa15.37■□□□□ 0.05
CAGE1-201ENST00000296742 LNPKQ9C0E8 428 aa15.37■□□□□ 0.05
CAGE1-201ENST00000296742 FLT4P35916 1363 aa15.37■□□□□ 0.05
CAGE1-201ENST00000296742 HOXC9P31274 260 aa15.36■□□□□ 0.05
CAGE1-201ENST00000296742 TERF1P54274 439 aa15.36■□□□□ 0.05
CAGE1-201ENST00000296742 KLHL40Q2TBA0 621 aa15.36■□□□□ 0.05
CAGE1-201ENST00000296742 NECTIN2Q92692 538 aa15.36■□□□□ 0.05
CAGE1-201ENST00000296742 RBM42Q9BTD8 480 aaKnown RBP15.36■□□□□ 0.05
CAGE1-201ENST00000296742 SBNO1A3KN83 1393 aa15.35■□□□□ 0.05
CAGE1-201ENST00000296742 RTF1Q92541 710 aaKnown RBP15.35■□□□□ 0.05
CAGE1-201ENST00000296742 XRN1Q8IZH2 1706 aaKnown RBP15.35■□□□□ 0.05
CAGE1-201ENST00000296742 CAVIN1Q6NZI2 390 aaKnown RBP15.35■□□□□ 0.05
CAGE1-201ENST00000296742 PIK3C2AO00443 1686 aa15.35■□□□□ 0.05
CAGE1-201ENST00000296742 K7ELQ4 463 aaPredicted RBP15.35■□□□□ 0.05
CAGE1-201ENST00000296742 ZBTB7BO15156 539 aaPredicted RBP15.35■□□□□ 0.05
CAGE1-201ENST00000296742 ZHX1Q9UKY1 873 aaPredicted RBP15.35■□□□□ 0.05
CAGE1-201ENST00000296742 CHL1O00533 1208 aa15.34■□□□□ 0.05
CAGE1-201ENST00000296742 BAG4O95429 457 aaKnown RBP15.34■□□□□ 0.05
CAGE1-201ENST00000296742 HDAC1Q13547 482 aaPredicted RBP15.34■□□□□ 0.05
CAGE1-201ENST00000296742 GAS2L2Q8NHY3 880 aa15.34■□□□□ 0.05
CAGE1-201ENST00000296742 MCTP1Q6DN14 999 aa15.33■□□□□ 0.04
CAGE1-201ENST00000296742 TSPYL4Q9UJ04 414 aa15.33■□□□□ 0.04
CAGE1-201ENST00000296742 NOL7Q9UMY1 257 aaKnown RBP15.33■□□□□ 0.04
CAGE1-201ENST00000296742 KIF2CQ99661 725 aa15.33■□□□□ 0.04
CAGE1-201ENST00000296742 NALCNQ8IZF0 1738 aa15.32■□□□□ 0.04
CAGE1-201ENST00000296742 ZNF428Q96B54 188 aa15.31■□□□□ 0.04
CAGE1-201ENST00000296742 RBSNQ9H1K0 784 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms