RNA–Protein interactions for RNA: ENST00000296449.9

CCDC36-201, Transcript of coiled-coil domain containing 36, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC36, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36-201ENST00000296449 DCTN1Q14203 1278 aa12.54□□□□□ -0.4
CCDC36-201ENST00000296449 PODXL2Q9NZ53 605 aa12.54□□□□□ -0.4
CCDC36-201ENST00000296449 TERF1P54274 439 aa12.53□□□□□ -0.4
CCDC36-201ENST00000296449 WAPLQ7Z5K2 1190 aa12.53□□□□□ -0.4
CCDC36-201ENST00000296449 NME9Q86XW9 330 aa12.53□□□□□ -0.4
CCDC36-201ENST00000296449 ZGPATQ8N5A5 531 aaKnown RBP12.53□□□□□ -0.4
CCDC36-201ENST00000296449 RBSNQ9H1K0 784 aa12.53□□□□□ -0.4
CCDC36-201ENST00000296449 RGS12O14924 1447 aa12.53□□□□□ -0.4
CCDC36-201ENST00000296449 MSNP26038 577 aaKnown RBP12.53□□□□□ -0.4
CCDC36-201ENST00000296449 CEP85Q6P2H3 762 aa12.53□□□□□ -0.4
CCDC36-201ENST00000296449 RPAP2Q8IXW5 612 aaPredicted RBP12.53□□□□□ -0.4
CCDC36-201ENST00000296449 VSIG10Q8N0Z9 540 aa12.53□□□□□ -0.4
CCDC36-201ENST00000296449 ZRANB1Q9UGI0 708 aa12.53□□□□□ -0.4
CCDC36-201ENST00000296449 NEO1Q92859 1461 aa12.52□□□□□ -0.4
CCDC36-201ENST00000296449 ST18O60284 1047 aa12.52□□□□□ -0.4
CCDC36-201ENST00000296449 ZDHHC9Q9Y397 364 aa12.52□□□□□ -0.4
CCDC36-201ENST00000296449 AATKQ6ZMQ8 1374 aa12.52□□□□□ -0.41
CCDC36-201ENST00000296449 CPSF1Q10570 1443 aaKnown RBP12.52□□□□□ -0.41
CCDC36-201ENST00000296449 EDC4Q6P2E9 1401 aaKnown RBP12.52□□□□□ -0.41
CCDC36-201ENST00000296449 SMARCA5O60264 1052 aaPredicted RBP12.52□□□□□ -0.41
CCDC36-201ENST00000296449 PRPF40AO75400 957 aaKnown RBP12.52□□□□□ -0.41
CCDC36-201ENST00000296449 GPT2Q8TD30 523 aa12.52□□□□□ -0.41
CCDC36-201ENST00000296449 PDLIM2Q96JY6 352 aa12.52□□□□□ -0.41
CCDC36-201ENST00000296449 DLC1Q96QB1 1528 aa12.52□□□□□ -0.41
CCDC36-201ENST00000296449 PRIM1P49642 420 aaKnown RBP12.51□□□□□ -0.41
CCDC36-201ENST00000296449 FBXO31Q5XUX0 539 aaPredicted RBP12.51□□□□□ -0.41
CCDC36-201ENST00000296449 CASC1Q6TDU7 716 aa12.51□□□□□ -0.41
CCDC36-201ENST00000296449 RTL1A6NKG5 1358 aa12.51□□□□□ -0.41
CCDC36-201ENST00000296449 RBM27Q9P2N5 1060 aaKnown RBP12.51□□□□□ -0.41
CCDC36-201ENST00000296449 APBB1O00213 710 aa12.5□□□□□ -0.41
CCDC36-201ENST00000296449 RRS1Q15050 365 aaKnown RBP12.5□□□□□ -0.41
CCDC36-201ENST00000296449 KRT24Q2M2I5 525 aa12.5□□□□□ -0.41
CCDC36-201ENST00000296449 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.5□□□□□ -0.41
CCDC36-201ENST00000296449 MSH6P52701 1360 aa12.5□□□□□ -0.41
CCDC36-201ENST00000296449 REC8O95072 547 aa12.5□□□□□ -0.41
CCDC36-201ENST00000296449 NOL7Q9UMY1 257 aaKnown RBP12.5□□□□□ -0.41
CCDC36-201ENST00000296449 CHAMP1Q96JM3 812 aa12.49□□□□□ -0.41
CCDC36-201ENST00000296449 MEIS3Q99687 375 aa12.49□□□□□ -0.41
CCDC36-201ENST00000296449 ZMYND15Q9H091 742 aa12.49□□□□□ -0.41
CCDC36-201ENST00000296449 PDCL3Q9H2J4 239 aa12.49□□□□□ -0.41
CCDC36-201ENST00000296449 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.49□□□□□ -0.41
CCDC36-201ENST00000296449 HAP1P54257 671 aaPredicted RBP12.48□□□□□ -0.41
CCDC36-201ENST00000296449 ERC2O15083 957 aa12.48□□□□□ -0.41
CCDC36-201ENST00000296449 ZNF500O60304 480 aaPredicted RBP12.48□□□□□ -0.41
CCDC36-201ENST00000296449 COG3Q96JB2 828 aa12.48□□□□□ -0.41
CCDC36-201ENST00000296449 TMEM63CQ9P1W3 806 aa12.48□□□□□ -0.41
CCDC36-201ENST00000296449 RICTORQ6R327 1708 aa12.48□□□□□ -0.41
CCDC36-201ENST00000296449 CHL1O00533 1208 aa12.47□□□□□ -0.41
CCDC36-201ENST00000296449 STAG3Q9UJ98 1225 aa12.47□□□□□ -0.41
CCDC36-201ENST00000296449 CPS1P31327 1500 aa12.47□□□□□ -0.41
CCDC36-201ENST00000296449 WASLO00401 505 aaPredicted RBP12.47□□□□□ -0.41
CCDC36-201ENST00000296449 LRSAM1Q6UWE0 723 aa12.47□□□□□ -0.41
CCDC36-201ENST00000296449 NSFL1CQ9UNZ2 370 aaKnown RBP12.47□□□□□ -0.41
CCDC36-201ENST00000296449 PTPRCP08575 1304 aa12.47□□□□□ -0.41
CCDC36-201ENST00000296449 AEBP1Q8IUX7 1158 aa12.46□□□□□ -0.41
CCDC36-201ENST00000296449 KIAA0232Q92628 1395 aa12.46□□□□□ -0.41
CCDC36-201ENST00000296449 SYCE3A1L190 88 aa12.46□□□□□ -0.42
CCDC36-201ENST00000296449 OSBPL3Q9H4L5 887 aa12.46□□□□□ -0.42
CCDC36-201ENST00000296449 MCM5P33992 734 aa12.45□□□□□ -0.42
CCDC36-201ENST00000296449 PDE1AP54750 535 aa12.45□□□□□ -0.42
CCDC36-201ENST00000296449 MCM10Q7L590 875 aa12.45□□□□□ -0.42
CCDC36-201ENST00000296449 TMX3Q96JJ7 454 aa12.45□□□□□ -0.42
CCDC36-201ENST00000296449 ZKSCAN5Q9Y2L8 839 aa12.45□□□□□ -0.42
CCDC36-201ENST00000296449 R3HCC1Q9Y3T6 440 aaKnown RBP12.45□□□□□ -0.42
CCDC36-201ENST00000296449 NCKAP5LQ9HCH0 1330 aa12.45□□□□□ -0.42
CCDC36-201ENST00000296449 NEK4P51957 841 aa12.44□□□□□ -0.42
CCDC36-201ENST00000296449 XPCQ01831 940 aaPredicted RBP12.44□□□□□ -0.42
CCDC36-201ENST00000296449 FOXD4L5Q5VV16 416 aaPredicted RBP12.44□□□□□ -0.42
CCDC36-201ENST00000296449 SULT6B1Q6IMI4 303 aa12.44□□□□□ -0.42
CCDC36-201ENST00000296449 FOXD4L4Q8WXT5 416 aaPredicted RBP12.44□□□□□ -0.42
CCDC36-201ENST00000296449 SETD1AO15047 1707 aaKnown RBP12.44□□□□□ -0.42
CCDC36-201ENST00000296449 NUDT16Q96DE0 195 aaKnown RBP12.44□□□□□ -0.42
CCDC36-201ENST00000296449 HMMRO75330 724 aa12.43□□□□□ -0.42
CCDC36-201ENST00000296449 MBD3O95983 291 aa12.43□□□□□ -0.42
CCDC36-201ENST00000296449 EIF4A2Q14240 407 aaKnown RBP12.43□□□□□ -0.42
CCDC36-201ENST00000296449 NRKQ7Z2Y5 1582 aa12.43□□□□□ -0.42
CCDC36-201ENST00000296449 MON2Q7Z3U7 1717 aa12.43□□□□□ -0.42
CCDC36-201ENST00000296449 BRD1O95696 1058 aa12.43□□□□□ -0.42
CCDC36-201ENST00000296449 SLC4A2P04920 1241 aa12.43□□□□□ -0.42
CCDC36-201ENST00000296449 A2ML1A8K2U0 1454 aa12.42□□□□□ -0.42
CCDC36-201ENST00000296449 MCM2P49736 904 aa12.42□□□□□ -0.42
CCDC36-201ENST00000296449 RBM10P98175 930 aaKnown RBP12.42□□□□□ -0.42
CCDC36-201ENST00000296449 CUL4AQ13619 759 aa12.42□□□□□ -0.42
CCDC36-201ENST00000296449 CCDC61Q9Y6R9 512 aa12.42□□□□□ -0.42
CCDC36-201ENST00000296449 TSHZ3Q63HK5 1081 aa12.41□□□□□ -0.42
CCDC36-201ENST00000296449 MAP7D2Q96T17 732 aa12.41□□□□□ -0.42
CCDC36-201ENST00000296449 ESYT1Q9BSJ8 1104 aa12.41□□□□□ -0.42
CCDC36-201ENST00000296449 SALL3Q9BXA9 1300 aa12.41□□□□□ -0.42
CCDC36-201ENST00000296449 C3P01024 1663 aa12.41□□□□□ -0.42
CCDC36-201ENST00000296449 CSPP1Q1MSJ5 1256 aa12.41□□□□□ -0.42
CCDC36-201ENST00000296449 G2E3Q7L622 706 aa12.41□□□□□ -0.42
CCDC36-201ENST00000296449 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.41□□□□□ -0.42
CCDC36-201ENST00000296449 CCDC39Q9UFE4 941 aa12.41□□□□□ -0.42
CCDC36-201ENST00000296449 PALD1Q9ULE6 856 aa12.41□□□□□ -0.42
CCDC36-201ENST00000296449 F6X3S4 739 aa12.41□□□□□ -0.42
CCDC36-201ENST00000296449 RNF214Q8ND24 703 aa12.41□□□□□ -0.42
CCDC36-201ENST00000296449 CRB1P82279 1406 aa12.4□□□□□ -0.42
CCDC36-201ENST00000296449 TUBGCP6Q96RT7 1819 aa12.4□□□□□ -0.42
CCDC36-201ENST00000296449 SLC4A10Q6U841 1118 aa12.4□□□□□ -0.42
CCDC36-201ENST00000296449 TXNDC2Q86VQ3 553 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms