RNA–Protein interactions for RNA: ENST00000296255.7

RPN1-201, Transcript of ribophorin I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPN1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-201ENST00000296255 PANK2Q9BZ23 570 aa20.7■□□□□ 0.9
RPN1-201ENST00000296255 K7ELQ4 463 aaPredicted RBP20.7■□□□□ 0.9
RPN1-201ENST00000296255 UBR1Q8IWV7 1749 aa20.7■□□□□ 0.9
RPN1-201ENST00000296255 TNRQ92752 1358 aa20.7■□□□□ 0.9
RPN1-201ENST00000296255 ESF1Q9H501 851 aaKnown RBP20.7■□□□□ 0.9
RPN1-201ENST00000296255 FOXD4L1Q9NU39 408 aa20.7■□□□□ 0.9
RPN1-201ENST00000296255 KIAA0232Q92628 1395 aa20.69■□□□□ 0.9
RPN1-201ENST00000296255 TTC22Q5TAA0 569 aa20.69■□□□□ 0.9
RPN1-201ENST00000296255 NALCNQ8IZF0 1738 aa20.69■□□□□ 0.9
RPN1-201ENST00000296255 NUTM2FA1L443 756 aa20.69■□□□□ 0.9
RPN1-201ENST00000296255 CEP85Q6P2H3 762 aa20.69■□□□□ 0.9
RPN1-201ENST00000296255 OTUD7AQ8TE49 926 aaPredicted RBP20.69■□□□□ 0.9
RPN1-201ENST00000296255 MSH6P52701 1360 aa20.68■□□□□ 0.9
RPN1-201ENST00000296255 PLEKHG3A1L390 1219 aa20.67■□□□□ 0.9
RPN1-201ENST00000296255 RRAGDQ9NQL2 400 aaPredicted RBP20.67■□□□□ 0.9
RPN1-201ENST00000296255 USP6P35125 1406 aa20.67■□□□□ 0.9
RPN1-201ENST00000296255 CRB1P82279 1406 aa20.67■□□□□ 0.9
RPN1-201ENST00000296255 RTL1A6NKG5 1358 aa20.67■□□□□ 0.9
RPN1-201ENST00000296255 GAS2L2Q8NHY3 880 aa20.67■□□□□ 0.9
RPN1-201ENST00000296255 RPAP2Q8IXW5 612 aaPredicted RBP20.66■□□□□ 0.9
RPN1-201ENST00000296255 HSP90AA1P07900 732 aaKnown RBP20.65■□□□□ 0.9
RPN1-201ENST00000296255 MEIS3Q99687 375 aa20.65■□□□□ 0.9
RPN1-201ENST00000296255 USP31Q70CQ4 1352 aa20.65■□□□□ 0.9
RPN1-201ENST00000296255 PTPRCP08575 1304 aa20.65■□□□□ 0.9
RPN1-201ENST00000296255 HAP1P54257 671 aaPredicted RBP20.65■□□□□ 0.9
RPN1-201ENST00000296255 SMARCA5O60264 1052 aaPredicted RBP20.64■□□□□ 0.89
RPN1-201ENST00000296255 GBP4Q96PP9 640 aa20.64■□□□□ 0.89
RPN1-201ENST00000296255 MIS18AQ9NYP9 233 aa20.64■□□□□ 0.89
RPN1-201ENST00000296255 SSH2Q76I76 1423 aa20.63■□□□□ 0.89
RPN1-201ENST00000296255 SOX12O15370 315 aa20.63■□□□□ 0.89
RPN1-201ENST00000296255 FOXO3O43524 673 aa20.63■□□□□ 0.89
RPN1-201ENST00000296255 LTKP29376 864 aa20.63■□□□□ 0.89
RPN1-201ENST00000296255 MRE11P49959 708 aa20.63■□□□□ 0.89
RPN1-201ENST00000296255 SLC4A2P04920 1241 aa20.62■□□□□ 0.89
RPN1-201ENST00000296255 USP26Q9BXU7 913 aa20.62■□□□□ 0.89
RPN1-201ENST00000296255 MAP3K19Q56UN5 1328 aa20.62■□□□□ 0.89
RPN1-201ENST00000296255 RIMS1Q86UR5 1692 aaKnown RBP20.62■□□□□ 0.89
RPN1-201ENST00000296255 SDSP20132 328 aa20.61■□□□□ 0.89
RPN1-201ENST00000296255 SSFA2P28290 1259 aa20.61■□□□□ 0.89
RPN1-201ENST00000296255 APBB1O00213 710 aa20.61■□□□□ 0.89
RPN1-201ENST00000296255 G2E3Q7L622 706 aa20.6■□□□□ 0.89
RPN1-201ENST00000296255 PTPRUQ92729 1446 aa20.6■□□□□ 0.89
RPN1-201ENST00000296255 GRPEL1Q9HAV7 217 aa20.6■□□□□ 0.89
RPN1-201ENST00000296255 ARHGEF10O15013 1369 aa20.6■□□□□ 0.89
RPN1-201ENST00000296255 RABEP1Q15276 862 aa20.6■□□□□ 0.89
RPN1-201ENST00000296255 MTHFSDQ2M296 383 aaKnown RBP20.6■□□□□ 0.89
RPN1-201ENST00000296255 PLEKHG1Q9ULL1 1385 aa20.59■□□□□ 0.89
RPN1-201ENST00000296255 FMN2Q9NZ56 1722 aa20.59■□□□□ 0.89
RPN1-201ENST00000296255 GAS2L3Q86XJ1 694 aa20.58■□□□□ 0.89
RPN1-201ENST00000296255 KIF13AQ9H1H9 1805 aa20.57■□□□□ 0.88
RPN1-201ENST00000296255 F6X3S4 739 aa20.57■□□□□ 0.88
RPN1-201ENST00000296255 EIF5BO60841 1220 aaKnown RBP20.57■□□□□ 0.88
RPN1-201ENST00000296255 SLC26A8Q96RN1 970 aa20.57■□□□□ 0.88
RPN1-201ENST00000296255 SKOR2Q2VWA4 1001 aaPredicted RBP20.56■□□□□ 0.88
RPN1-201ENST00000296255 CLEC17AQ6ZS10 378 aa20.56■□□□□ 0.88
RPN1-201ENST00000296255 TSPYL4Q9UJ04 414 aa20.56■□□□□ 0.88
RPN1-201ENST00000296255 ISY1Q9ULR0 285 aaKnown RBP20.56■□□□□ 0.88
RPN1-201ENST00000296255 AK9Q5TCS8 1911 aa20.56■□□□□ 0.88
RPN1-201ENST00000296255 KDRP35968 1356 aa20.55■□□□□ 0.88
RPN1-201ENST00000296255 CEP170BQ9Y4F5 1589 aaPredicted RBP20.55■□□□□ 0.88
RPN1-201ENST00000296255 SBNO1A3KN83 1393 aa20.54■□□□□ 0.88
RPN1-201ENST00000296255 PTMSP20962 102 aa20.54■□□□□ 0.88
RPN1-201ENST00000296255 SLC4A10Q6U841 1118 aa20.54■□□□□ 0.88
RPN1-201ENST00000296255 TTC21AQ8NDW8 1320 aa20.54■□□□□ 0.88
RPN1-201ENST00000296255 RTF1Q92541 710 aaKnown RBP20.54■□□□□ 0.88
RPN1-201ENST00000296255 FLT4P35916 1363 aa20.53■□□□□ 0.88
RPN1-201ENST00000296255 BAG4O95429 457 aaKnown RBP20.53■□□□□ 0.88
RPN1-201ENST00000296255 EYA1Q99502 592 aa20.53■□□□□ 0.88
RPN1-201ENST00000296255 CCT4P50991 539 aaKnown RBP20.52■□□□□ 0.88
RPN1-201ENST00000296255 HMMRO75330 724 aa20.52■□□□□ 0.87
RPN1-201ENST00000296255 RGPD8O14715 1765 aaPredicted RBP20.51■□□□□ 0.87
RPN1-201ENST00000296255 IGSF1Q8N6C5 1336 aa20.51■□□□□ 0.87
RPN1-201ENST00000296255 CASC1Q6TDU7 716 aa20.51■□□□□ 0.87
RPN1-201ENST00000296255 AMOTL2Q9Y2J4 779 aa20.51■□□□□ 0.87
RPN1-201ENST00000296255 PDE1AP54750 535 aa20.5■□□□□ 0.87
RPN1-201ENST00000296255 OSBPL3Q9H4L5 887 aa20.5■□□□□ 0.87
RPN1-201ENST00000296255 CYP2E1P05181 493 aaPredicted RBP20.5■□□□□ 0.87
RPN1-201ENST00000296255 PIK3C2AO00443 1686 aa20.5■□□□□ 0.87
RPN1-201ENST00000296255 CEBPAP49715 358 aaPredicted RBP20.49■□□□□ 0.87
RPN1-201ENST00000296255 PKP1Q13835 747 aa20.49■□□□□ 0.87
RPN1-201ENST00000296255 ERC2O15083 957 aa20.48■□□□□ 0.87
RPN1-201ENST00000296255 AMPHP49418 695 aa20.48■□□□□ 0.87
RPN1-201ENST00000296255 LRRC37A3O60309 1634 aa20.48■□□□□ 0.87
RPN1-201ENST00000296255 REC8O95072 547 aa20.48■□□□□ 0.87
RPN1-201ENST00000296255 GNAI2P04899 355 aa20.48■□□□□ 0.87
RPN1-201ENST00000296255 NGDNQ8NEJ9 315 aaKnown RBP20.48■□□□□ 0.87
RPN1-201ENST00000296255 EXOC6BQ9Y2D4 811 aa20.48■□□□□ 0.87
RPN1-201ENST00000296255 DIP2AQ14689 1571 aa20.47■□□□□ 0.87
RPN1-201ENST00000296255 GOLGA6L22H0YM25 854 aa20.47■□□□□ 0.87
RPN1-201ENST00000296255 SALL3Q9BXA9 1300 aa20.47■□□□□ 0.87
RPN1-201ENST00000296255 KLHL40Q2TBA0 621 aa20.47■□□□□ 0.87
RPN1-201ENST00000296255 TSHZ3Q63HK5 1081 aa20.47■□□□□ 0.87
RPN1-201ENST00000296255 FAM208AQ9UK61 1670 aaKnown RBP20.46■□□□□ 0.87
RPN1-201ENST00000296255 XRN1Q8IZH2 1706 aaKnown RBP20.46■□□□□ 0.87
RPN1-201ENST00000296255 NUCB2P80303 420 aa20.46■□□□□ 0.87
RPN1-201ENST00000296255 ZGPATQ8N5A5 531 aaKnown RBP20.46■□□□□ 0.87
RPN1-201ENST00000296255 TUBGCP6Q96RT7 1819 aa20.46■□□□□ 0.87
RPN1-201ENST00000296255 CLCN1P35523 988 aa20.45■□□□□ 0.87
RPN1-201ENST00000296255 FLIIQ13045 1269 aa20.45■□□□□ 0.87
RPN1-201ENST00000296255 STK31Q9BXU1 1019 aa20.45■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 467.6 ms