RNA–Protein interactions for RNA: ENST00000295598.9

ATP1A1-201, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATP1A1, Length 3,654 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-201ENST00000295598 RILPL2Q969X0 211 aa15.99■□□□□ 0.15
ATP1A1-201ENST00000295598 TRIM6-TRIM34B2RNG4 842 aa15.97■□□□□ 0.15
ATP1A1-201ENST00000295598 CDC45O75419 566 aa15.97■□□□□ 0.15
ATP1A1-201ENST00000295598 ZGPATQ8N5A5 531 aaKnown RBP15.97■□□□□ 0.15
ATP1A1-201ENST00000295598 ABTB2Q8N961 1025 aa15.97■□□□□ 0.15
ATP1A1-201ENST00000295598 ZNF692Q9BU19 519 aaPredicted RBP15.97■□□□□ 0.15
ATP1A1-201ENST00000295598 CHL1O00533 1208 aa15.97■□□□□ 0.15
ATP1A1-201ENST00000295598 CPSF1Q10570 1443 aaKnown RBP15.97■□□□□ 0.15
ATP1A1-201ENST00000295598 MED14O60244 1454 aa15.97■□□□□ 0.15
ATP1A1-201ENST00000295598 TNRQ92752 1358 aa15.96■□□□□ 0.15
ATP1A1-201ENST00000295598 GAS2L3Q86XJ1 694 aa15.96■□□□□ 0.15
ATP1A1-201ENST00000295598 DCTPP1Q9H773 170 aa15.96■□□□□ 0.14
ATP1A1-201ENST00000295598 USP32Q8NFA0 1604 aa15.95■□□□□ 0.14
ATP1A1-201ENST00000295598 PNMA6EA0A0J9YXQ4 647 aa15.95■□□□□ 0.14
ATP1A1-201ENST00000295598 RBM25P49756 843 aaKnown RBP15.95■□□□□ 0.14
ATP1A1-201ENST00000295598 HDGFP51858 240 aaKnown RBP15.95■□□□□ 0.14
ATP1A1-201ENST00000295598 PHAXQ9H814 394 aaKnown RBP15.95■□□□□ 0.14
ATP1A1-201ENST00000295598 ARHGAP45Q92619 1136 aa15.95■□□□□ 0.14
ATP1A1-201ENST00000295598 EID1Q9Y6B2 187 aa15.95■□□□□ 0.14
ATP1A1-201ENST00000295598 K7ELQ4 463 aaPredicted RBP15.94■□□□□ 0.14
ATP1A1-201ENST00000295598 TTC22Q5TAA0 569 aa15.94■□□□□ 0.14
ATP1A1-201ENST00000295598 MCTP1Q6DN14 999 aa15.94■□□□□ 0.14
ATP1A1-201ENST00000295598 KCNA6P17658 529 aa15.94■□□□□ 0.14
ATP1A1-201ENST00000295598 TRHP20396 242 aaPredicted RBP15.94■□□□□ 0.14
ATP1A1-201ENST00000295598 NUTM1Q86Y26 1132 aa15.93■□□□□ 0.14
ATP1A1-201ENST00000295598 ANKRD44Q8N8A2 993 aa15.93■□□□□ 0.14
ATP1A1-201ENST00000295598 KCNQ3O43525 872 aa15.93■□□□□ 0.14
ATP1A1-201ENST00000295598 DDX54Q8TDD1 881 aaKnown RBP15.93■□□□□ 0.14
ATP1A1-201ENST00000295598 LRRC59Q96AG4 307 aaKnown RBP15.93■□□□□ 0.14
ATP1A1-201ENST00000295598 STK31Q9BXU1 1019 aa15.92■□□□□ 0.14
ATP1A1-201ENST00000295598 TMEM2Q9UHN6 1383 aa15.92■□□□□ 0.14
ATP1A1-201ENST00000295598 UPF3BQ9BZI7 483 aaKnown RBP15.92■□□□□ 0.14
ATP1A1-201ENST00000295598 LRRFIP2Q9Y608 721 aaKnown RBP15.92■□□□□ 0.14
ATP1A1-201ENST00000295598 ATP7BP35670 1465 aa15.91■□□□□ 0.14
ATP1A1-201ENST00000295598 NCBP3Q53F19 620 aaKnown RBP15.91■□□□□ 0.14
ATP1A1-201ENST00000295598 INTS3Q68E01 1043 aaKnown RBP15.91■□□□□ 0.14
ATP1A1-201ENST00000295598 LGR6Q9HBX8 967 aa15.91■□□□□ 0.14
ATP1A1-201ENST00000295598 UNC5CLQ8IV45 518 aa15.9■□□□□ 0.14
ATP1A1-201ENST00000295598 RTL1A6NKG5 1358 aa15.9■□□□□ 0.14
ATP1A1-201ENST00000295598 IL17REQ8NFR9 667 aa15.9■□□□□ 0.14
ATP1A1-201ENST00000295598 FLIIQ13045 1269 aa15.9■□□□□ 0.14
ATP1A1-201ENST00000295598 DDX49Q9Y6V7 483 aaKnown RBP15.9■□□□□ 0.14
ATP1A1-201ENST00000295598 ANO2Q9NQ90 1003 aa15.89■□□□□ 0.13
ATP1A1-201ENST00000295598 RBM27Q9P2N5 1060 aaKnown RBP15.89■□□□□ 0.13
ATP1A1-201ENST00000295598 SETD1BQ9UPS6 1966 aaKnown RBP15.89■□□□□ 0.13
ATP1A1-201ENST00000295598 PTCH1Q13635 1447 aa15.89■□□□□ 0.13
ATP1A1-201ENST00000295598 USP26Q9BXU7 913 aa15.89■□□□□ 0.13
ATP1A1-201ENST00000295598 NEK4P51957 841 aa15.89■□□□□ 0.13
ATP1A1-201ENST00000295598 MPRIPQ6WCQ1 1025 aa15.88■□□□□ 0.13
ATP1A1-201ENST00000295598 MPNDQ8N594 471 aa15.88■□□□□ 0.13
ATP1A1-201ENST00000295598 PALD1Q9ULE6 856 aa15.88■□□□□ 0.13
ATP1A1-201ENST00000295598 CHMP4BQ9H444 224 aaKnown RBP15.88■□□□□ 0.13
ATP1A1-201ENST00000295598 AK9Q5TCS8 1911 aa15.87■□□□□ 0.13
ATP1A1-201ENST00000295598 L1TD1Q5T7N2 865 aaKnown RBP15.87■□□□□ 0.13
ATP1A1-201ENST00000295598 PTPRUQ92729 1446 aa15.87■□□□□ 0.13
ATP1A1-201ENST00000295598 BRPF1P55201 1214 aaPredicted RBP15.87■□□□□ 0.13
ATP1A1-201ENST00000295598 GRPEL1Q9HAV7 217 aa15.87■□□□□ 0.13
ATP1A1-201ENST00000295598 CDK12Q9NYV4 1490 aaPredicted RBP15.87■□□□□ 0.13
ATP1A1-201ENST00000295598 PIP4K2AP48426 406 aaPredicted RBP15.87■□□□□ 0.13
ATP1A1-201ENST00000295598 ESCO1Q5FWF5 840 aa15.87■□□□□ 0.13
ATP1A1-201ENST00000295598 CAVIN1Q6NZI2 390 aaKnown RBP15.87■□□□□ 0.13
ATP1A1-201ENST00000295598 JARID2Q92833 1246 aaPredicted RBP15.87■□□□□ 0.13
ATP1A1-201ENST00000295598 IL25Q9H293 177 aa15.87■□□□□ 0.13
ATP1A1-201ENST00000295598 PRAMEF22A3QJZ6 481 aa15.86■□□□□ 0.13
ATP1A1-201ENST00000295598 PDE1AP54750 535 aa15.86■□□□□ 0.13
ATP1A1-201ENST00000295598 GDPD2Q9HCC8 539 aa15.86■□□□□ 0.13
ATP1A1-201ENST00000295598 DLC1Q96QB1 1528 aa15.86■□□□□ 0.13
ATP1A1-201ENST00000295598 AATKQ6ZMQ8 1374 aa15.86■□□□□ 0.13
ATP1A1-201ENST00000295598 PRPF40AO75400 957 aaKnown RBP15.86■□□□□ 0.13
ATP1A1-201ENST00000295598 RAB3GAP1Q15042 981 aa15.86■□□□□ 0.13
ATP1A1-201ENST00000295598 HDGFL1Q5TGJ6 251 aa15.86■□□□□ 0.13
ATP1A1-201ENST00000295598 GBP4Q96PP9 640 aa15.86■□□□□ 0.13
ATP1A1-201ENST00000295598 GNAI2P04899 355 aa15.86■□□□□ 0.13
ATP1A1-201ENST00000295598 RPAP2Q8IXW5 612 aaPredicted RBP15.86■□□□□ 0.13
ATP1A1-201ENST00000295598 PIK3R4Q99570 1358 aa15.85■□□□□ 0.13
ATP1A1-201ENST00000295598 KIF20BQ96Q89 1820 aa15.85■□□□□ 0.13
ATP1A1-201ENST00000295598 CCDC9Q9Y3X0 531 aaKnown RBP15.85■□□□□ 0.13
ATP1A1-201ENST00000295598 PLEKHG3A1L390 1219 aa15.85■□□□□ 0.13
ATP1A1-201ENST00000295598 SURF6O75683 361 aaKnown RBP15.85■□□□□ 0.13
ATP1A1-201ENST00000295598 AIMP1Q12904 312 aaKnown RBP15.85■□□□□ 0.13
ATP1A1-201ENST00000295598 SNX21Q969T3 373 aa15.85■□□□□ 0.13
ATP1A1-201ENST00000295598 ADAMTS13Q76LX8 1427 aa15.85■□□□□ 0.13
ATP1A1-201ENST00000295598 RIMS1Q86UR5 1692 aaKnown RBP15.85■□□□□ 0.13
ATP1A1-201ENST00000295598 DDX11L8A8MPP1 907 aa15.84■□□□□ 0.13
ATP1A1-201ENST00000295598 GNAT3A8MTJ3 354 aa15.84■□□□□ 0.13
ATP1A1-201ENST00000295598 NAP1L5Q96NT1 182 aaPredicted RBP15.84■□□□□ 0.13
ATP1A1-201ENST00000295598 USP6P35125 1406 aa15.84■□□□□ 0.13
ATP1A1-201ENST00000295598 HOXC9P31274 260 aa15.84■□□□□ 0.13
ATP1A1-201ENST00000295598 RGS12O14924 1447 aa15.84■□□□□ 0.13
ATP1A1-201ENST00000295598 BAG4O95429 457 aaKnown RBP15.84■□□□□ 0.13
ATP1A1-201ENST00000295598 CPA1P15085 419 aa15.84■□□□□ 0.13
ATP1A1-201ENST00000295598 ATP10DQ9P241 1426 aa15.84■□□□□ 0.13
ATP1A1-201ENST00000295598 VIRMAQ69YN4 1812 aaKnown RBP15.83■□□□□ 0.13
ATP1A1-201ENST00000295598 NBPF7P0C2Y1 421 aaPredicted RBP15.83■□□□□ 0.12
ATP1A1-201ENST00000295598 DDIT3P35638 169 aa15.83■□□□□ 0.12
ATP1A1-201ENST00000295598 NBPF6Q5VWK0 638 aa15.83■□□□□ 0.12
ATP1A1-201ENST00000295598 NBPF4Q96M43 638 aa15.83■□□□□ 0.12
ATP1A1-201ENST00000295598 CASC1Q6TDU7 716 aa15.82■□□□□ 0.12
ATP1A1-201ENST00000295598 RIMBP3CA6NJZ7 1639 aa15.82■□□□□ 0.12
ATP1A1-201ENST00000295598 RIMBP3BA6NNM3 1639 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms