RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 C19orf44Q9H6X5 657 aa21.19■□□□□ 0.98
CDC42EP3-201ENST00000295324 TMOD2Q9NZR1 351 aa21.19■□□□□ 0.98
CDC42EP3-201ENST00000295324 DBF4Q9UBU7 674 aaPredicted RBP21.19■□□□□ 0.98
CDC42EP3-201ENST00000295324 PDCP20941 246 aa21.18■□□□□ 0.98
CDC42EP3-201ENST00000295324 METTL24Q5JXM2 366 aa21.18■□□□□ 0.98
CDC42EP3-201ENST00000295324 HYPKQ9NX55 129 aa21.18■□□□□ 0.98
CDC42EP3-201ENST00000295324 AKAP2Q9Y2D5 859 aa21.18■□□□□ 0.98
CDC42EP3-201ENST00000295324 LRP2BPQ9P2M1 347 aa21.18■□□□□ 0.98
CDC42EP3-201ENST00000295324 NEK4P51957 841 aa21.18■□□□□ 0.98
CDC42EP3-201ENST00000295324 IPO7O95373 1038 aaKnown RBP21.18■□□□□ 0.98
CDC42EP3-201ENST00000295324 ALDH1L2Q3SY69 923 aa21.17■□□□□ 0.98
CDC42EP3-201ENST00000295324 ZSCAN29Q8IWY8 852 aaPredicted RBP21.17■□□□□ 0.98
CDC42EP3-201ENST00000295324 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.17■□□□□ 0.98
CDC42EP3-201ENST00000295324 MYD88Q99836 296 aa21.17■□□□□ 0.98
CDC42EP3-201ENST00000295324 EIF4G3O43432 1585 aaKnown RBP21.17■□□□□ 0.98
CDC42EP3-201ENST00000295324 ANKRD36BQ8N2N9 1353 aa21.17■□□□□ 0.98
CDC42EP3-201ENST00000295324 R3HCC1Q9Y3T6 440 aaKnown RBP21.16■□□□□ 0.98
CDC42EP3-201ENST00000295324 IFIT1P09914 478 aaKnown RBP21.16■□□□□ 0.98
CDC42EP3-201ENST00000295324 TNNT3P45378 269 aaPredicted RBP21.16■□□□□ 0.98
CDC42EP3-201ENST00000295324 CTNNA3Q9UI47 895 aa21.16■□□□□ 0.98
CDC42EP3-201ENST00000295324 WDR62O43379 1518 aa21.16■□□□□ 0.98
CDC42EP3-201ENST00000295324 NUP160Q12769 1436 aa21.15■□□□□ 0.98
CDC42EP3-201ENST00000295324 TRMT112Q9UI30 125 aaKnown RBP21.15■□□□□ 0.98
CDC42EP3-201ENST00000295324 HSPA2P54652 639 aa21.15■□□□□ 0.98
CDC42EP3-201ENST00000295324 RABEP1Q15276 862 aa21.15■□□□□ 0.98
CDC42EP3-201ENST00000295324 ZMYM3Q14202 1370 aa21.15■□□□□ 0.98
CDC42EP3-201ENST00000295324 CAVIN4Q5BKX8 364 aa21.14■□□□□ 0.98
CDC42EP3-201ENST00000295324 AK7Q96M32 723 aa21.14■□□□□ 0.98
CDC42EP3-201ENST00000295324 CYP46A1Q9Y6A2 500 aa21.13■□□□□ 0.97
CDC42EP3-201ENST00000295324 ANKRD1Q15327 319 aa21.13■□□□□ 0.97
CDC42EP3-201ENST00000295324 CNKSR2Q8WXI2 1034 aa21.13■□□□□ 0.97
CDC42EP3-201ENST00000295324 IL1RAPL2Q9NP60 686 aa21.13■□□□□ 0.97
CDC42EP3-201ENST00000295324 SASS6Q6UVJ0 657 aa21.13■□□□□ 0.97
CDC42EP3-201ENST00000295324 CHD1LQ86WJ1 897 aa21.13■□□□□ 0.97
CDC42EP3-201ENST00000295324 TRIM22Q8IYM9 498 aa21.13■□□□□ 0.97
CDC42EP3-201ENST00000295324 TDO2P48775 406 aa21.13■□□□□ 0.97
CDC42EP3-201ENST00000295324 IFIT5Q13325 482 aaKnown RBP21.13■□□□□ 0.97
CDC42EP3-201ENST00000295324 KIF1BPQ96EK5 621 aa21.13■□□□□ 0.97
CDC42EP3-201ENST00000295324 CCDC184Q52MB2 194 aa21.13■□□□□ 0.97
CDC42EP3-201ENST00000295324 DNAAF4Q8WXU2 420 aa21.13■□□□□ 0.97
CDC42EP3-201ENST00000295324 C11orf95C9JLR9 678 aaPredicted RBP21.12■□□□□ 0.97
CDC42EP3-201ENST00000295324 TMEM57Q8N5G2 664 aa21.12■□□□□ 0.97
CDC42EP3-201ENST00000295324 IDH1O75874 414 aaKnown RBP21.12■□□□□ 0.97
CDC42EP3-201ENST00000295324 ABCF2Q9UG63 623 aa21.12■□□□□ 0.97
CDC42EP3-201ENST00000295324 RPGRQ92834 1020 aaKnown RBP21.11■□□□□ 0.97
CDC42EP3-201ENST00000295324 BCL11BQ9C0K0 894 aaPredicted RBP21.11■□□□□ 0.97
CDC42EP3-201ENST00000295324 RAB11FIP3O75154 756 aa21.1■□□□□ 0.97
CDC42EP3-201ENST00000295324 ATP2B1P20020 1258 aa21.1■□□□□ 0.97
CDC42EP3-201ENST00000295324 CCDC69A6NI79 296 aa21.1■□□□□ 0.97
CDC42EP3-201ENST00000295324 KDM4AO75164 1064 aa21.1■□□□□ 0.97
CDC42EP3-201ENST00000295324 KIF21AQ7Z4S6 1674 aa21.1■□□□□ 0.97
CDC42EP3-201ENST00000295324 ANKIB1Q9P2G1 1089 aa21.1■□□□□ 0.97
CDC42EP3-201ENST00000295324 CTTNBP2Q8WZ74 1663 aa21.1■□□□□ 0.97
CDC42EP3-201ENST00000295324 A0A087WZG4 1122 aa21.09■□□□□ 0.97
CDC42EP3-201ENST00000295324 ZCRB1Q8TBF4 217 aaKnown RBP21.09■□□□□ 0.97
CDC42EP3-201ENST00000295324 SSH1Q8WYL5 1049 aa21.09■□□□□ 0.97
CDC42EP3-201ENST00000295324 TBX22Q9Y458 520 aa21.09■□□□□ 0.97
CDC42EP3-201ENST00000295324 NCKAP5LQ9HCH0 1330 aa21.09■□□□□ 0.97
CDC42EP3-201ENST00000295324 A0A0U1RQG5 324 aaPredicted RBP21.09■□□□□ 0.97
CDC42EP3-201ENST00000295324 SDF4Q9BRK5 362 aa21.09■□□□□ 0.97
CDC42EP3-201ENST00000295324 TXLNAP40222 546 aa21.09■□□□□ 0.97
CDC42EP3-201ENST00000295324 AIDAQ96BJ3 306 aa21.08■□□□□ 0.97
CDC42EP3-201ENST00000295324 MAP4K4O95819 1239 aaPredicted RBP21.08■□□□□ 0.97
CDC42EP3-201ENST00000295324 UBAC1Q9BSL1 405 aa21.08■□□□□ 0.97
CDC42EP3-201ENST00000295324 PPIP5K1Q6PFW1 1433 aa21.08■□□□□ 0.96
CDC42EP3-201ENST00000295324 SNRPA1P09661 255 aaKnown RBP21.07■□□□□ 0.96
CDC42EP3-201ENST00000295324 STK11IPQ8N1F8 1099 aa21.07■□□□□ 0.96
CDC42EP3-201ENST00000295324 CDK5RAP3Q96JB5 506 aa21.07■□□□□ 0.96
CDC42EP3-201ENST00000295324 SOGA3Q5TF21 947 aa21.07■□□□□ 0.96
CDC42EP3-201ENST00000295324 ANKRD18BA2A2Z9 1011 aa21.07■□□□□ 0.96
CDC42EP3-201ENST00000295324 LRRC59Q96AG4 307 aaKnown RBP21.07■□□□□ 0.96
CDC42EP3-201ENST00000295324 EXOC6BQ9Y2D4 811 aa21.07■□□□□ 0.96
CDC42EP3-201ENST00000295324 DISP3Q9P2K9 1392 aa21.07■□□□□ 0.96
CDC42EP3-201ENST00000295324 ZNF287Q9HBT7 754 aa21.07■□□□□ 0.96
CDC42EP3-201ENST00000295324 C8orf37Q96NL8 207 aa21.07■□□□□ 0.96
CDC42EP3-201ENST00000295324 ZBTB3Q9H5J0 574 aa21.07■□□□□ 0.96
CDC42EP3-201ENST00000295324 KRT32Q14532 448 aa21.06■□□□□ 0.96
CDC42EP3-201ENST00000295324 FANCIQ9NVI1 1328 aa21.06■□□□□ 0.96
CDC42EP3-201ENST00000295324 GLRX3O76003 335 aaKnown RBP21.06■□□□□ 0.96
CDC42EP3-201ENST00000295324 RARSP54136 660 aaKnown RBP21.05■□□□□ 0.96
CDC42EP3-201ENST00000295324 BLOC1S2Q6QNY1 142 aa21.05■□□□□ 0.96
CDC42EP3-201ENST00000295324 ZNF396Q96N95 335 aaPredicted RBP21.05■□□□□ 0.96
CDC42EP3-201ENST00000295324 RFC4P35249 363 aa21.05■□□□□ 0.96
CDC42EP3-201ENST00000295324 SMARCC1Q92922 1105 aaPredicted RBP21.05■□□□□ 0.96
CDC42EP3-201ENST00000295324 PUS7Q96PZ0 661 aaKnown RBP21.05■□□□□ 0.96
CDC42EP3-201ENST00000295324 OLFM4Q6UX06 510 aa21.05■□□□□ 0.96
CDC42EP3-201ENST00000295324 SPINK5Q9NQ38 1064 aaPredicted RBP21.05■□□□□ 0.96
CDC42EP3-201ENST00000295324 HSP90AB2PQ58FF8 381 aa21.05■□□□□ 0.96
CDC42EP3-201ENST00000295324 PTPRCP08575 1304 aa21.04■□□□□ 0.96
CDC42EP3-201ENST00000295324 FLIIQ13045 1269 aa21.04■□□□□ 0.96
CDC42EP3-201ENST00000295324 PPP1R42Q7Z4L9 355 aa21.04■□□□□ 0.96
CDC42EP3-201ENST00000295324 NUP133Q8WUM0 1156 aa21.04■□□□□ 0.96
CDC42EP3-201ENST00000295324 SLC5A1P13866 664 aa21.04■□□□□ 0.96
CDC42EP3-201ENST00000295324 GPTP24298 496 aa21.04■□□□□ 0.96
CDC42EP3-201ENST00000295324 DDB1Q16531 1140 aa21.04■□□□□ 0.96
CDC42EP3-201ENST00000295324 JMYQ8N9B5 988 aa21.04■□□□□ 0.96
CDC42EP3-201ENST00000295324 CDC5LQ99459 802 aaKnown RBP21.03■□□□□ 0.96
CDC42EP3-201ENST00000295324 ATP10AO60312 1499 aa21.03■□□□□ 0.96
CDC42EP3-201ENST00000295324 CDKL5O76039 1030 aa21.03■□□□□ 0.96
CDC42EP3-201ENST00000295324 KCNA6P17658 529 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms