RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 WASLO00401 505 aaPredicted RBP16.44■□□□□ 0.22
KCNIP3-201ENST00000295225 ALDH1L2Q3SY69 923 aa16.44■□□□□ 0.22
KCNIP3-201ENST00000295225 NOL8Q76FK4 1167 aaKnown RBP16.44■□□□□ 0.22
KCNIP3-201ENST00000295225 IL16Q14005 1332 aa16.44■□□□□ 0.22
KCNIP3-201ENST00000295225 DTNBO60941 627 aa16.44■□□□□ 0.22
KCNIP3-201ENST00000295225 GNAI1P63096 354 aa16.44■□□□□ 0.22
KCNIP3-201ENST00000295225 MEIS3Q99687 375 aa16.43■□□□□ 0.22
KCNIP3-201ENST00000295225 FAM135BQ49AJ0 1406 aa16.43■□□□□ 0.22
KCNIP3-201ENST00000295225 USP32Q8NFA0 1604 aa16.43■□□□□ 0.22
KCNIP3-201ENST00000295225 ALKQ9UM73 1620 aa16.43■□□□□ 0.22
KCNIP3-201ENST00000295225 ARHGEF40Q8TER5 1519 aa16.43■□□□□ 0.22
KCNIP3-201ENST00000295225 FOXD4L6Q3SYB3 417 aaPredicted RBP16.42■□□□□ 0.22
KCNIP3-201ENST00000295225 BMP2KLQ5H9B9 411 aa16.42■□□□□ 0.22
KCNIP3-201ENST00000295225 FOXD4L3Q6VB84 417 aaPredicted RBP16.42■□□□□ 0.22
KCNIP3-201ENST00000295225 G2E3Q7L622 706 aa16.42■□□□□ 0.22
KCNIP3-201ENST00000295225 SLC26A8Q96RN1 970 aa16.42■□□□□ 0.22
KCNIP3-201ENST00000295225 RBM25P49756 843 aaKnown RBP16.41■□□□□ 0.22
KCNIP3-201ENST00000295225 GRIPAP1Q4V328 841 aa16.41■□□□□ 0.22
KCNIP3-201ENST00000295225 PNNQ9H307 717 aaKnown RBP16.41■□□□□ 0.22
KCNIP3-201ENST00000295225 PRR36Q9H6K5 1346 aa16.41■□□□□ 0.22
KCNIP3-201ENST00000295225 EIF4A2Q14240 407 aaKnown RBP16.41■□□□□ 0.22
KCNIP3-201ENST00000295225 PLEKHM2Q8IWE5 1019 aa16.41■□□□□ 0.22
KCNIP3-201ENST00000295225 FAM43AQ8N2R8 423 aa16.41■□□□□ 0.22
KCNIP3-201ENST00000295225 PLCD4Q9BRC7 762 aa16.4■□□□□ 0.22
KCNIP3-201ENST00000295225 IFT57Q9NWB7 429 aa16.4■□□□□ 0.22
KCNIP3-201ENST00000295225 RIMS2Q9UQ26 1411 aa16.4■□□□□ 0.22
KCNIP3-201ENST00000295225 CEBPAP49715 358 aaPredicted RBP16.39■□□□□ 0.21
KCNIP3-201ENST00000295225 ARID3AQ99856 593 aa16.39■□□□□ 0.21
KCNIP3-201ENST00000295225 CPS1P31327 1500 aa16.39■□□□□ 0.21
KCNIP3-201ENST00000295225 SLC4A2P04920 1241 aa16.39■□□□□ 0.21
KCNIP3-201ENST00000295225 L1TD1Q5T7N2 865 aaKnown RBP16.39■□□□□ 0.21
KCNIP3-201ENST00000295225 RBM33Q96EV2 1170 aaKnown RBP16.39■□□□□ 0.21
KCNIP3-201ENST00000295225 ZFYVE9O95405 1425 aa16.38■□□□□ 0.21
KCNIP3-201ENST00000295225 CLTCQ00610 1675 aaKnown RBP16.38■□□□□ 0.21
KCNIP3-201ENST00000295225 ZNF853P0CG23 659 aa16.38■□□□□ 0.21
KCNIP3-201ENST00000295225 LTV1Q96GA3 475 aaPredicted RBP16.38■□□□□ 0.21
KCNIP3-201ENST00000295225 ZGPATQ8N5A5 531 aaKnown RBP16.38■□□□□ 0.21
KCNIP3-201ENST00000295225 GRPEL1Q9HAV7 217 aa16.38■□□□□ 0.21
KCNIP3-201ENST00000295225 FSD2A1L4K1 749 aa16.37■□□□□ 0.21
KCNIP3-201ENST00000295225 PTMAP06454 111 aaKnown RBP16.37■□□□□ 0.21
KCNIP3-201ENST00000295225 GCC1Q96CN9 775 aa16.37■□□□□ 0.21
KCNIP3-201ENST00000295225 EXOC6BQ9Y2D4 811 aa16.37■□□□□ 0.21
KCNIP3-201ENST00000295225 CCDC61Q9Y6R9 512 aa16.37■□□□□ 0.21
KCNIP3-201ENST00000295225 ABCC4O15439 1325 aa16.37■□□□□ 0.21
KCNIP3-201ENST00000295225 ERBB4Q15303 1308 aa16.37■□□□□ 0.21
KCNIP3-201ENST00000295225 MED14O60244 1454 aa16.37■□□□□ 0.21
KCNIP3-201ENST00000295225 K7ELQ4 463 aaPredicted RBP16.36■□□□□ 0.21
KCNIP3-201ENST00000295225 A2ML1A8K2U0 1454 aa16.36■□□□□ 0.21
KCNIP3-201ENST00000295225 RIMBP3CA6NJZ7 1639 aa16.36■□□□□ 0.21
KCNIP3-201ENST00000295225 RIMBP3BA6NNM3 1639 aa16.36■□□□□ 0.21
KCNIP3-201ENST00000295225 RIMBP3Q9UFD9 1639 aa16.36■□□□□ 0.21
KCNIP3-201ENST00000295225 DDIT3P35638 169 aa16.35■□□□□ 0.21
KCNIP3-201ENST00000295225 PSMD1Q99460 953 aa16.35■□□□□ 0.21
KCNIP3-201ENST00000295225 MSH6P52701 1360 aa16.35■□□□□ 0.21
KCNIP3-201ENST00000295225 ZBTB7CA1YPR0 619 aa16.35■□□□□ 0.21
KCNIP3-201ENST00000295225 SDSP20132 328 aa16.35■□□□□ 0.21
KCNIP3-201ENST00000295225 MCTP1Q6DN14 999 aa16.35■□□□□ 0.21
KCNIP3-201ENST00000295225 CDC45O75419 566 aa16.34■□□□□ 0.21
KCNIP3-201ENST00000295225 ACEP12821 1306 aa16.34■□□□□ 0.21
KCNIP3-201ENST00000295225 ZMYM3Q14202 1370 aa16.33■□□□□ 0.21
KCNIP3-201ENST00000295225 RAB3GAP1Q15042 981 aa16.33■□□□□ 0.21
KCNIP3-201ENST00000295225 FAM193AP78312 1265 aa16.33■□□□□ 0.2
KCNIP3-201ENST00000295225 CEP85Q6P2H3 762 aa16.33■□□□□ 0.2
KCNIP3-201ENST00000295225 DIP2BQ9P265 1576 aa16.33■□□□□ 0.2
KCNIP3-201ENST00000295225 PLCD3Q8N3E9 789 aa16.32■□□□□ 0.2
KCNIP3-201ENST00000295225 MAP4K4O95819 1239 aaPredicted RBP16.32■□□□□ 0.2
KCNIP3-201ENST00000295225 TTC22Q5TAA0 569 aa16.32■□□□□ 0.2
KCNIP3-201ENST00000295225 API5Q9BZZ5 524 aaKnown RBP16.32■□□□□ 0.2
KCNIP3-201ENST00000295225 DDX49Q9Y6V7 483 aaKnown RBP16.32■□□□□ 0.2
KCNIP3-201ENST00000295225 LARP6Q9BRS8 491 aaKnown RBP16.32■□□□□ 0.2
KCNIP3-201ENST00000295225 DCTPP1Q9H773 170 aa16.32■□□□□ 0.2
KCNIP3-201ENST00000295225 RBM27Q9P2N5 1060 aaKnown RBP16.32■□□□□ 0.2
KCNIP3-201ENST00000295225 DDX11L8A8MPP1 907 aa16.31■□□□□ 0.2
KCNIP3-201ENST00000295225 MTHFSDQ2M296 383 aaKnown RBP16.31■□□□□ 0.2
KCNIP3-201ENST00000295225 USHBP1Q8N6Y0 703 aa16.31■□□□□ 0.2
KCNIP3-201ENST00000295225 SNX21Q969T3 373 aa16.31■□□□□ 0.2
KCNIP3-201ENST00000295225 FAM43BQ6ZT52 329 aaPredicted RBP16.31■□□□□ 0.2
KCNIP3-201ENST00000295225 DLG5Q8TDM6 1919 aa16.31■□□□□ 0.2
KCNIP3-201ENST00000295225 KIF20BQ96Q89 1820 aa16.3■□□□□ 0.2
KCNIP3-201ENST00000295225 PTMSP20962 102 aa16.3■□□□□ 0.2
KCNIP3-201ENST00000295225 KNDC1Q76NI1 1749 aa16.3■□□□□ 0.2
KCNIP3-201ENST00000295225 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.3■□□□□ 0.2
KCNIP3-201ENST00000295225 ARHGAP45Q92619 1136 aa16.3■□□□□ 0.2
KCNIP3-201ENST00000295225 MCCP23508 829 aa16.3■□□□□ 0.2
KCNIP3-201ENST00000295225 TSPYL4Q9UJ04 414 aa16.3■□□□□ 0.2
KCNIP3-201ENST00000295225 PTCH1Q13635 1447 aa16.29■□□□□ 0.2
KCNIP3-201ENST00000295225 CAVIN1Q6NZI2 390 aaKnown RBP16.29■□□□□ 0.2
KCNIP3-201ENST00000295225 RGS22Q8NE09 1264 aa16.29■□□□□ 0.2
KCNIP3-201ENST00000295225 ZNF830Q96NB3 372 aaPredicted RBP16.29■□□□□ 0.2
KCNIP3-201ENST00000295225 GBP4Q96PP9 640 aa16.29■□□□□ 0.2
KCNIP3-201ENST00000295225 USP26Q9BXU7 913 aa16.29■□□□□ 0.2
KCNIP3-201ENST00000295225 ROBO2Q9HCK4 1378 aa16.29■□□□□ 0.2
KCNIP3-201ENST00000295225 MAP3K19Q56UN5 1328 aa16.29■□□□□ 0.2
KCNIP3-201ENST00000295225 MRE11P49959 708 aa16.29■□□□□ 0.2
KCNIP3-201ENST00000295225 RILPL2Q969X0 211 aa16.29■□□□□ 0.2
KCNIP3-201ENST00000295225 TTC21BQ7Z4L5 1316 aa16.28■□□□□ 0.2
KCNIP3-201ENST00000295225 BAG4O95429 457 aaKnown RBP16.28■□□□□ 0.2
KCNIP3-201ENST00000295225 LTKP29376 864 aa16.28■□□□□ 0.2
KCNIP3-201ENST00000295225 MPNDQ8N594 471 aa16.28■□□□□ 0.2
KCNIP3-201ENST00000295225 ANKRD44Q8N8A2 993 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms