RNA–Protein interactions for RNA: ENST00000291722.11

CACFD1-201, Transcript of calcium channel flower domain containing 1, humanhuman

TSL 2 BASIC

Gene CACFD1, Length 2,688 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-201ENST00000291722 FMN2Q9NZ56 1722 aa20.46■□□□□ 0.87
CACFD1-201ENST00000291722 PIK3C2AO00443 1686 aa20.46■□□□□ 0.87
CACFD1-201ENST00000291722 VSIG10Q8N0Z9 540 aa20.46■□□□□ 0.87
CACFD1-201ENST00000291722 GSE1Q14687 1217 aa20.45■□□□□ 0.86
CACFD1-201ENST00000291722 TTC21AQ8NDW8 1320 aa20.45■□□□□ 0.86
CACFD1-201ENST00000291722 AMPHP49418 695 aa20.44■□□□□ 0.86
CACFD1-201ENST00000291722 NLRP6P59044 892 aa20.44■□□□□ 0.86
CACFD1-201ENST00000291722 EYA1Q99502 592 aa20.44■□□□□ 0.86
CACFD1-201ENST00000291722 CEP170BQ9Y4F5 1589 aaPredicted RBP20.44■□□□□ 0.86
CACFD1-201ENST00000291722 XRN1Q8IZH2 1706 aaKnown RBP20.44■□□□□ 0.86
CACFD1-201ENST00000291722 TBC1D2Q9BYX2 928 aa20.43■□□□□ 0.86
CACFD1-201ENST00000291722 CRB1P82279 1406 aa20.43■□□□□ 0.86
CACFD1-201ENST00000291722 SPRYD3Q8NCJ5 442 aa20.42■□□□□ 0.86
CACFD1-201ENST00000291722 API5Q9BZZ5 524 aaKnown RBP20.42■□□□□ 0.86
CACFD1-201ENST00000291722 SBNO1A3KN83 1393 aa20.42■□□□□ 0.86
CACFD1-201ENST00000291722 FLT4P35916 1363 aa20.42■□□□□ 0.86
CACFD1-201ENST00000291722 C22orf23Q9BZE7 217 aa20.41■□□□□ 0.86
CACFD1-201ENST00000291722 RGS12O14924 1447 aa20.41■□□□□ 0.86
CACFD1-201ENST00000291722 ARHGEF10O15013 1369 aa20.41■□□□□ 0.86
CACFD1-201ENST00000291722 BECN1Q14457 450 aa20.4■□□□□ 0.86
CACFD1-201ENST00000291722 LTV1Q96GA3 475 aaPredicted RBP20.4■□□□□ 0.86
CACFD1-201ENST00000291722 MARF1Q9Y4F3 1742 aaKnown RBP20.38■□□□□ 0.85
CACFD1-201ENST00000291722 C14orf37Q86TY3 774 aa20.38■□□□□ 0.85
CACFD1-201ENST00000291722 GCC1Q96CN9 775 aa20.38■□□□□ 0.85
CACFD1-201ENST00000291722 IGSF1Q8N6C5 1336 aa20.37■□□□□ 0.85
CACFD1-201ENST00000291722 G2E3Q7L622 706 aa20.37■□□□□ 0.85
CACFD1-201ENST00000291722 ABTB2Q8N961 1025 aa20.37■□□□□ 0.85
CACFD1-201ENST00000291722 TSPYL4Q9UJ04 414 aa20.37■□□□□ 0.85
CACFD1-201ENST00000291722 SLC4A2P04920 1241 aa20.36■□□□□ 0.85
CACFD1-201ENST00000291722 HOXC9P31274 260 aa20.36■□□□□ 0.85
CACFD1-201ENST00000291722 FAM43AQ8N2R8 423 aa20.36■□□□□ 0.85
CACFD1-201ENST00000291722 KDRP35968 1356 aa20.36■□□□□ 0.85
CACFD1-201ENST00000291722 USHBP1Q8N6Y0 703 aa20.36■□□□□ 0.85
CACFD1-201ENST00000291722 RTF1Q92541 710 aaKnown RBP20.36■□□□□ 0.85
CACFD1-201ENST00000291722 MSH6P52701 1360 aa20.35■□□□□ 0.85
CACFD1-201ENST00000291722 INTS3Q68E01 1043 aaKnown RBP20.35■□□□□ 0.85
CACFD1-201ENST00000291722 KIAA0232Q92628 1395 aa20.35■□□□□ 0.85
CACFD1-201ENST00000291722 CHMP4BQ9H444 224 aaKnown RBP20.35■□□□□ 0.85
CACFD1-201ENST00000291722 ANTXR1Q9H6X2 564 aa20.35■□□□□ 0.85
CACFD1-201ENST00000291722 SETD1BQ9UPS6 1966 aaKnown RBP20.35■□□□□ 0.85
CACFD1-201ENST00000291722 F6X3S4 739 aa20.34■□□□□ 0.85
CACFD1-201ENST00000291722 C16orf71Q8IYS4 520 aaPredicted RBP20.34■□□□□ 0.85
CACFD1-201ENST00000291722 MEIS3Q99687 375 aa20.34■□□□□ 0.85
CACFD1-201ENST00000291722 NECTIN2Q92692 538 aa20.33■□□□□ 0.84
CACFD1-201ENST00000291722 BMP2KLQ5H9B9 411 aa20.32■□□□□ 0.84
CACFD1-201ENST00000291722 ANKARQ7Z5J8 1434 aa20.32■□□□□ 0.84
CACFD1-201ENST00000291722 ATP10DQ9P241 1426 aa20.32■□□□□ 0.84
CACFD1-201ENST00000291722 APBB1O00213 710 aa20.31■□□□□ 0.84
CACFD1-201ENST00000291722 NWD1Q149M9 1564 aa20.31■□□□□ 0.84
CACFD1-201ENST00000291722 SLC4A10Q6U841 1118 aa20.3■□□□□ 0.84
CACFD1-201ENST00000291722 OTUD7AQ8TE49 926 aaPredicted RBP20.3■□□□□ 0.84
CACFD1-201ENST00000291722 CEP85Q6P2H3 762 aa20.3■□□□□ 0.84
CACFD1-201ENST00000291722 PHF8Q9UPP1 1060 aa20.3■□□□□ 0.84
CACFD1-201ENST00000291722 ZBTB7CA1YPR0 619 aa20.29■□□□□ 0.84
CACFD1-201ENST00000291722 SMARCA5O60264 1052 aaPredicted RBP20.29■□□□□ 0.84
CACFD1-201ENST00000291722 GSPT1P15170 499 aaKnown RBP20.29■□□□□ 0.84
CACFD1-201ENST00000291722 GAS2L2Q8NHY3 880 aa20.29■□□□□ 0.84
CACFD1-201ENST00000291722 DCTPP1Q9H773 170 aa20.29■□□□□ 0.84
CACFD1-201ENST00000291722 RTL1A6NKG5 1358 aa20.29■□□□□ 0.84
CACFD1-201ENST00000291722 TBC1D9Q6ZT07 1266 aa20.29■□□□□ 0.84
CACFD1-201ENST00000291722 ANKRD44Q8N8A2 993 aa20.29■□□□□ 0.84
CACFD1-201ENST00000291722 KIF24Q5T7B8 1368 aa20.28■□□□□ 0.84
CACFD1-201ENST00000291722 IL17REQ8NFR9 667 aa20.28■□□□□ 0.84
CACFD1-201ENST00000291722 PLEKHM2Q8IWE5 1019 aa20.28■□□□□ 0.84
CACFD1-201ENST00000291722 CHD2O14647 1828 aaKnown RBP20.28■□□□□ 0.84
CACFD1-201ENST00000291722 PTPRCP08575 1304 aa20.27■□□□□ 0.84
CACFD1-201ENST00000291722 ANKLE2Q86XL3 938 aa20.27■□□□□ 0.83
CACFD1-201ENST00000291722 GNAT3A8MTJ3 354 aa20.26■□□□□ 0.83
CACFD1-201ENST00000291722 HAP1P54257 671 aaPredicted RBP20.25■□□□□ 0.83
CACFD1-201ENST00000291722 XPCQ01831 940 aaPredicted RBP20.25■□□□□ 0.83
CACFD1-201ENST00000291722 LTN1O94822 1766 aa20.25■□□□□ 0.83
CACFD1-201ENST00000291722 RBM25P49756 843 aaKnown RBP20.25■□□□□ 0.83
CACFD1-201ENST00000291722 ESCO1Q5FWF5 840 aa20.25■□□□□ 0.83
CACFD1-201ENST00000291722 KIF2CQ99661 725 aa20.24■□□□□ 0.83
CACFD1-201ENST00000291722 LRRC37A3O60309 1634 aa20.23■□□□□ 0.83
CACFD1-201ENST00000291722 RBM42Q9BTD8 480 aaKnown RBP20.22■□□□□ 0.83
CACFD1-201ENST00000291722 NBPF6Q5VWK0 638 aa20.22■□□□□ 0.83
CACFD1-201ENST00000291722 RPAP2Q8IXW5 612 aaPredicted RBP20.22■□□□□ 0.83
CACFD1-201ENST00000291722 NBPF4Q96M43 638 aa20.22■□□□□ 0.83
CACFD1-201ENST00000291722 MAP3K5Q99683 1374 aa20.22■□□□□ 0.83
CACFD1-201ENST00000291722 CD2BP2O95400 341 aaKnown RBP20.21■□□□□ 0.83
CACFD1-201ENST00000291722 USP54Q70EL1 1684 aa20.21■□□□□ 0.83
CACFD1-201ENST00000291722 RGPD2P0DJD1 1756 aa20.21■□□□□ 0.83
CACFD1-201ENST00000291722 PSME1Q06323 249 aa20.2■□□□□ 0.82
CACFD1-201ENST00000291722 LRRC59Q96AG4 307 aaKnown RBP20.2■□□□□ 0.82
CACFD1-201ENST00000291722 ORAI2Q96SN7 254 aa20.2■□□□□ 0.82
CACFD1-201ENST00000291722 FLIIQ13045 1269 aa20.2■□□□□ 0.82
CACFD1-201ENST00000291722 TTC22Q5TAA0 569 aa20.2■□□□□ 0.82
CACFD1-201ENST00000291722 HSCBQ8IWL3 235 aa20.2■□□□□ 0.82
CACFD1-201ENST00000291722 FKBP5Q13451 457 aaPredicted RBP20.19■□□□□ 0.82
CACFD1-201ENST00000291722 STK31Q9BXU1 1019 aa20.19■□□□□ 0.82
CACFD1-201ENST00000291722 FAM208AQ9UK61 1670 aaKnown RBP20.19■□□□□ 0.82
CACFD1-201ENST00000291722 HTATSF1O43719 755 aaKnown RBP20.19■□□□□ 0.82
CACFD1-201ENST00000291722 LGR6Q9HBX8 967 aa20.19■□□□□ 0.82
CACFD1-201ENST00000291722 CDC45O75419 566 aa20.18■□□□□ 0.82
CACFD1-201ENST00000291722 IP6K1Q92551 441 aa20.18■□□□□ 0.82
CACFD1-201ENST00000291722 NFAT5O94916 1531 aa20.17■□□□□ 0.82
CACFD1-201ENST00000291722 TAF7Q15545 349 aaPredicted RBP20.17■□□□□ 0.82
CACFD1-201ENST00000291722 FOXD4L1Q9NU39 408 aa20.16■□□□□ 0.82
CACFD1-201ENST00000291722 CCT4P50991 539 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms