RNA–Protein interactions for RNA: ENST00000289957.2

CHRNB3-201, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB3, Length 2,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-201ENST00000289957 ABCC6O95255 1503 aa14.97□□□□□ -0.01
CHRNB3-201ENST00000289957 NGLY1Q96IV0 654 aa14.96□□□□□ -0.01
CHRNB3-201ENST00000289957 PHF23Q9BUL5 403 aaPredicted RBP14.96□□□□□ -0.01
CHRNB3-201ENST00000289957 NRAPQ86VF7 1730 aa14.96□□□□□ -0.01
CHRNB3-201ENST00000289957 B4GALNT3Q6L9W6 998 aa14.95□□□□□ -0.02
CHRNB3-201ENST00000289957 SLIT2O94813 1529 aa14.95□□□□□ -0.02
CHRNB3-201ENST00000289957 BCL9LQ86UU0 1499 aa14.95□□□□□ -0.02
CHRNB3-201ENST00000289957 SPATA31A6Q5VVP1 1343 aa14.94□□□□□ -0.02
CHRNB3-201ENST00000289957 PDE3BQ13370 1112 aa14.93□□□□□ -0.02
CHRNB3-201ENST00000289957 TSR2Q969E8 191 aaKnown RBP14.93□□□□□ -0.02
CHRNB3-201ENST00000289957 CRB1P82279 1406 aa14.93□□□□□ -0.02
CHRNB3-201ENST00000289957 MEX3CQ5U5Q3 659 aaKnown RBP14.92□□□□□ -0.02
CHRNB3-201ENST00000289957 CARD10Q9BWT7 1032 aa14.92□□□□□ -0.02
CHRNB3-201ENST00000289957 LGR6Q9HBX8 967 aa14.92□□□□□ -0.02
CHRNB3-201ENST00000289957 RAPGEF4Q8WZA2 1011 aa14.92□□□□□ -0.02
CHRNB3-201ENST00000289957 MIS18AQ9NYP9 233 aa14.92□□□□□ -0.02
CHRNB3-201ENST00000289957 NEFMP07197 916 aa14.91□□□□□ -0.02
CHRNB3-201ENST00000289957 ZNF530Q6P9A1 599 aaPredicted RBP14.91□□□□□ -0.02
CHRNB3-201ENST00000289957 PNNQ9H307 717 aaKnown RBP14.91□□□□□ -0.02
CHRNB3-201ENST00000289957 CCDC9Q9Y3X0 531 aaKnown RBP14.91□□□□□ -0.02
CHRNB3-201ENST00000289957 LAS1LQ9Y4W2 734 aaKnown RBP14.91□□□□□ -0.02
CHRNB3-201ENST00000289957 GOLGA2Q08379 1002 aa14.91□□□□□ -0.02
CHRNB3-201ENST00000289957 MPRIPQ6WCQ1 1025 aa14.91□□□□□ -0.02
CHRNB3-201ENST00000289957 CYP27B1O15528 508 aa14.9□□□□□ -0.02
CHRNB3-201ENST00000289957 DUSP27Q5VZP5 1158 aa14.9□□□□□ -0.02
CHRNB3-201ENST00000289957 IL17REQ8NFR9 667 aa14.9□□□□□ -0.02
CHRNB3-201ENST00000289957 AFF2P51816 1311 aa14.9□□□□□ -0.02
CHRNB3-201ENST00000289957 SLFN5Q08AF3 891 aa14.9□□□□□ -0.02
CHRNB3-201ENST00000289957 TATP17735 454 aaPredicted RBP14.89□□□□□ -0.03
CHRNB3-201ENST00000289957 CCDC27Q2M243 656 aa14.89□□□□□ -0.03
CHRNB3-201ENST00000289957 UNC5CLQ8IV45 518 aa14.89□□□□□ -0.03
CHRNB3-201ENST00000289957 FNBP4Q8N3X1 1017 aaPredicted RBP14.89□□□□□ -0.03
CHRNB3-201ENST00000289957 FBXO41Q8TF61 875 aa14.89□□□□□ -0.03
CHRNB3-201ENST00000289957 USP21Q9UK80 565 aa14.89□□□□□ -0.03
CHRNB3-201ENST00000289957 SPATA31A1Q5TZJ5 1347 aa14.89□□□□□ -0.03
CHRNB3-201ENST00000289957 ERICH6Q7L0X2 663 aa14.89□□□□□ -0.03
CHRNB3-201ENST00000289957 OVOS2A0A0G2JMS6 1433 aa14.88□□□□□ -0.03
CHRNB3-201ENST00000289957 IL2RBP14784 551 aa14.88□□□□□ -0.03
CHRNB3-201ENST00000289957 SHANK3Q9BYB0 1731 aa14.88□□□□□ -0.03
CHRNB3-201ENST00000289957 NWD2Q9ULI1 1742 aa14.88□□□□□ -0.03
CHRNB3-201ENST00000289957 GNAT3A8MTJ3 354 aa14.87□□□□□ -0.03
CHRNB3-201ENST00000289957 GAS2L2Q8NHY3 880 aa14.87□□□□□ -0.03
CHRNB3-201ENST00000289957 DDX54Q8TDD1 881 aaKnown RBP14.87□□□□□ -0.03
CHRNB3-201ENST00000289957 SPATA31A5Q5VU36 1347 aa14.87□□□□□ -0.03
CHRNB3-201ENST00000289957 SPATA31A7Q8IWB4 1347 aa14.87□□□□□ -0.03
CHRNB3-201ENST00000289957 MAP3K5Q99683 1374 aa14.87□□□□□ -0.03
CHRNB3-201ENST00000289957 FAM98CQ17RN3 349 aaKnown RBP14.87□□□□□ -0.03
CHRNB3-201ENST00000289957 KRT24Q2M2I5 525 aa14.87□□□□□ -0.03
CHRNB3-201ENST00000289957 PLEKHO1Q53GL0 409 aaPredicted RBP14.87□□□□□ -0.03
CHRNB3-201ENST00000289957 DISP2A7MBM2 1401 aa14.86□□□□□ -0.03
CHRNB3-201ENST00000289957 RRP1P56182 461 aaKnown RBP14.86□□□□□ -0.03
CHRNB3-201ENST00000289957 TRMT2AQ8IZ69 625 aaKnown RBP14.86□□□□□ -0.03
CHRNB3-201ENST00000289957 PKD1L3Q7Z443 1732 aa14.86□□□□□ -0.03
CHRNB3-201ENST00000289957 CCDC136Q96JN2 1154 aa14.86□□□□□ -0.03
CHRNB3-201ENST00000289957 KDM6AO15550 1401 aaPredicted RBP14.85□□□□□ -0.03
CHRNB3-201ENST00000289957 PHKG2P15735 406 aa14.85□□□□□ -0.03
CHRNB3-201ENST00000289957 VIRMAQ69YN4 1812 aaKnown RBP14.85□□□□□ -0.03
CHRNB3-201ENST00000289957 WDR63Q8IWG1 891 aa14.85□□□□□ -0.03
CHRNB3-201ENST00000289957 ZCRB1Q8TBF4 217 aaKnown RBP14.85□□□□□ -0.03
CHRNB3-201ENST00000289957 MBIPQ9NS73 344 aa14.85□□□□□ -0.03
CHRNB3-201ENST00000289957 PARP4Q9UKK3 1724 aaKnown RBP14.84□□□□□ -0.03
CHRNB3-201ENST00000289957 RTF1Q92541 710 aaKnown RBP14.84□□□□□ -0.03
CHRNB3-201ENST00000289957 AMOTQ4VCS5 1084 aa14.83□□□□□ -0.03
CHRNB3-201ENST00000289957 AKAP4Q5JQC9 854 aa14.83□□□□□ -0.03
CHRNB3-201ENST00000289957 C1orf141Q5JVX7 400 aa14.83□□□□□ -0.03
CHRNB3-201ENST00000289957 FAM182BQ5T319 152 aa14.83□□□□□ -0.03
CHRNB3-201ENST00000289957 E9PSI1 815 aa14.83□□□□□ -0.04
CHRNB3-201ENST00000289957 ELL2O00472 640 aaPredicted RBP14.83□□□□□ -0.04
CHRNB3-201ENST00000289957 KCNQ3O43525 872 aa14.83□□□□□ -0.04
CHRNB3-201ENST00000289957 VPS72Q15906 364 aa14.83□□□□□ -0.04
CHRNB3-201ENST00000289957 WNK3Q9BYP7 1800 aa14.83□□□□□ -0.04
CHRNB3-201ENST00000289957 RNMTO43148 476 aaKnown RBP14.82□□□□□ -0.04
CHRNB3-201ENST00000289957 ZNF853P0CG23 659 aa14.82□□□□□ -0.04
CHRNB3-201ENST00000289957 TSPYL6Q8N831 410 aa14.82□□□□□ -0.04
CHRNB3-201ENST00000289957 SPG7Q9UQ90 795 aa14.82□□□□□ -0.04
CHRNB3-201ENST00000289957 GLI3P10071 1580 aa14.82□□□□□ -0.04
CHRNB3-201ENST00000289957 LRRC37A3O60309 1634 aa14.82□□□□□ -0.04
CHRNB3-201ENST00000289957 EXOSC9Q06265 439 aaKnown RBP14.82□□□□□ -0.04
CHRNB3-201ENST00000289957 CEMIPQ8WUJ3 1361 aa14.82□□□□□ -0.04
CHRNB3-201ENST00000289957 NGEFQ8N5V2 710 aa14.81□□□□□ -0.04
CHRNB3-201ENST00000289957 A0A0G2JS52 829 aa14.8□□□□□ -0.04
CHRNB3-201ENST00000289957 LMOD3Q0VAK6 560 aa14.8□□□□□ -0.04
CHRNB3-201ENST00000289957 IFNL2Q8IZJ0 200 aa14.8□□□□□ -0.04
CHRNB3-201ENST00000289957 BCL2L13Q9BXK5 485 aa14.8□□□□□ -0.04
CHRNB3-201ENST00000289957 RCAN3Q9UKA8 241 aa14.8□□□□□ -0.04
CHRNB3-201ENST00000289957 KAT6BQ8WYB5 2073 aa14.8□□□□□ -0.04
CHRNB3-201ENST00000289957 TOGARAM1Q9Y4F4 1720 aa14.8□□□□□ -0.04
CHRNB3-201ENST00000289957 TCERG1O14776 1098 aaKnown RBP14.8□□□□□ -0.04
CHRNB3-201ENST00000289957 C8orf58Q8NAV2 365 aa14.8□□□□□ -0.04
CHRNB3-201ENST00000289957 CFAP44Q96MT7 982 aa14.8□□□□□ -0.04
CHRNB3-201ENST00000289957 QTRT2Q9H974 415 aaKnown RBP14.8□□□□□ -0.04
CHRNB3-201ENST00000289957 NOP58Q9Y2X3 529 aaKnown RBP14.8□□□□□ -0.04
CHRNB3-201ENST00000289957 SLC39A6Q13433 755 aa14.79□□□□□ -0.04
CHRNB3-201ENST00000289957 NCBP3Q53F19 620 aaKnown RBP14.79□□□□□ -0.04
CHRNB3-201ENST00000289957 NFATC2IPQ8NCF5 419 aa14.79□□□□□ -0.04
CHRNB3-201ENST00000289957 GJD4Q96KN9 370 aaPredicted RBP14.79□□□□□ -0.04
CHRNB3-201ENST00000289957 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.79□□□□□ -0.04
CHRNB3-201ENST00000289957 RGS17Q9UGC6 210 aaPredicted RBP14.79□□□□□ -0.04
CHRNB3-201ENST00000289957 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.79□□□□□ -0.04
CHRNB3-201ENST00000289957 PCDH11XQ9BZA7 1347 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms