RNA–Protein interactions for RNA: ENST00000289416.9

ACSM3-201, Transcript of acyl-CoA synthetase medium chain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACSM3, Length 2,845 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM3-201ENST00000289416 KIF20BQ96Q89 1820 aa5.54□□□□□ -1.52
ACSM3-201ENST00000289416 PXDNQ92626 1479 aa5.54□□□□□ -1.52
ACSM3-201ENST00000289416 USP54Q70EL1 1684 aa5.54□□□□□ -1.52
ACSM3-201ENST00000289416 A6NJR5 290 aa5.54□□□□□ -1.52
ACSM3-201ENST00000289416 HAX1O00165 279 aa5.54□□□□□ -1.52
ACSM3-201ENST00000289416 PER1O15534 1290 aaPredicted RBP5.54□□□□□ -1.52
ACSM3-201ENST00000289416 REM2Q8IYK8 340 aaPredicted RBP5.54□□□□□ -1.52
ACSM3-201ENST00000289416 PROCA1Q8NCQ7 364 aaPredicted RBP5.54□□□□□ -1.52
ACSM3-201ENST00000289416 ANKRD26Q9UPS8 1709 aa5.53□□□□□ -1.52
ACSM3-201ENST00000289416 FNBP4Q8N3X1 1017 aaPredicted RBP5.53□□□□□ -1.52
ACSM3-201ENST00000289416 NLRP7Q8WX94 980 aa5.53□□□□□ -1.52
ACSM3-201ENST00000289416 CARD14Q9BXL6 1004 aa5.53□□□□□ -1.52
ACSM3-201ENST00000289416 TTC21BQ7Z4L5 1316 aa5.53□□□□□ -1.52
ACSM3-201ENST00000289416 FOXO3O43524 673 aa5.53□□□□□ -1.52
ACSM3-201ENST00000289416 PPP1R15BQ5SWA1 713 aa5.53□□□□□ -1.52
ACSM3-201ENST00000289416 TMCO4Q5TGY1 634 aa5.53□□□□□ -1.52
ACSM3-201ENST00000289416 GIGYF2Q6Y7W6 1299 aaKnown RBP5.53□□□□□ -1.52
ACSM3-201ENST00000289416 KRT28Q7Z3Y7 464 aa5.53□□□□□ -1.52
ACSM3-201ENST00000289416 SOS2Q07890 1332 aaPredicted RBP5.53□□□□□ -1.52
ACSM3-201ENST00000289416 TNS3Q68CZ2 1445 aa5.52□□□□□ -1.53
ACSM3-201ENST00000289416 USP31Q70CQ4 1352 aa5.52□□□□□ -1.53
ACSM3-201ENST00000289416 ALS2Q96Q42 1657 aa5.52□□□□□ -1.53
ACSM3-201ENST00000289416 ARHGEF10O15013 1369 aa5.52□□□□□ -1.53
ACSM3-201ENST00000289416 PHLPP1O60346 1717 aa5.52□□□□□ -1.53
ACSM3-201ENST00000289416 PIK3C2AO00443 1686 aa5.52□□□□□ -1.53
ACSM3-201ENST00000289416 MED1Q15648 1581 aaPredicted RBP5.52□□□□□ -1.53
ACSM3-201ENST00000289416 MAP2K5Q13163 448 aa5.52□□□□□ -1.53
ACSM3-201ENST00000289416 DIEXFQ68CQ4 756 aaKnown RBP5.52□□□□□ -1.53
ACSM3-201ENST00000289416 TRAIPQ9BWF2 469 aa5.52□□□□□ -1.53
ACSM3-201ENST00000289416 POLR3EQ9NVU0 708 aa5.52□□□□□ -1.53
ACSM3-201ENST00000289416 COL16A1Q07092 1604 aaPredicted RBP5.51□□□□□ -1.53
ACSM3-201ENST00000289416 OVOS2A0A0J9YW53 1432 aa5.51□□□□□ -1.53
ACSM3-201ENST00000289416 OVOS2Q6IE36 1432 aa5.51□□□□□ -1.53
ACSM3-201ENST00000289416 SPATA31A3Q5VYP0 1347 aa5.51□□□□□ -1.53
ACSM3-201ENST00000289416 PITPNM1O00562 1244 aa5.51□□□□□ -1.53
ACSM3-201ENST00000289416 FYB1O15117 783 aa5.51□□□□□ -1.53
ACSM3-201ENST00000289416 DSG2Q14126 1118 aa5.51□□□□□ -1.53
ACSM3-201ENST00000289416 RALBP1Q15311 655 aa5.51□□□□□ -1.53
ACSM3-201ENST00000289416 AMHR2Q16671 573 aa5.51□□□□□ -1.53
ACSM3-201ENST00000289416 ANP32CO43423 234 aa5.51□□□□□ -1.53
ACSM3-201ENST00000289416 PAK3O75914 559 aaPredicted RBP5.51□□□□□ -1.53
ACSM3-201ENST00000289416 PIP4K2BP78356 416 aa5.51□□□□□ -1.53
ACSM3-201ENST00000289416 NLRP13Q86W25 1043 aa5.51□□□□□ -1.53
ACSM3-201ENST00000289416 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.51□□□□□ -1.53
ACSM3-201ENST00000289416 ZNF579Q8NAF0 562 aaKnown RBP5.51□□□□□ -1.53
ACSM3-201ENST00000289416 LRRC59Q96AG4 307 aaKnown RBP5.51□□□□□ -1.53
ACSM3-201ENST00000289416 CCDC97Q96F63 343 aaPredicted RBP5.51□□□□□ -1.53
ACSM3-201ENST00000289416 COG3Q96JB2 828 aa5.51□□□□□ -1.53
ACSM3-201ENST00000289416 PARD3Q8TEW0 1356 aa5.5□□□□□ -1.53
ACSM3-201ENST00000289416 COL22A1Q8NFW1 1626 aaPredicted RBP5.5□□□□□ -1.53
ACSM3-201ENST00000289416 SOX12O15370 315 aa5.5□□□□□ -1.53
ACSM3-201ENST00000289416 PRIM1P49642 420 aaKnown RBP5.5□□□□□ -1.53
ACSM3-201ENST00000289416 NME9Q86XW9 330 aa5.5□□□□□ -1.53
ACSM3-201ENST00000289416 USP19O94966 1318 aa5.5□□□□□ -1.53
ACSM3-201ENST00000289416 SLIT3O75094 1523 aa5.5□□□□□ -1.53
ACSM3-201ENST00000289416 MARF1Q9Y4F3 1742 aaKnown RBP5.5□□□□□ -1.53
ACSM3-201ENST00000289416 PDIA6Q15084 440 aa5.5□□□□□ -1.53
ACSM3-201ENST00000289416 ABTB2Q8N961 1025 aa5.5□□□□□ -1.53
ACSM3-201ENST00000289416 AATKQ6ZMQ8 1374 aa5.49□□□□□ -1.53
ACSM3-201ENST00000289416 XPCQ01831 940 aaPredicted RBP5.49□□□□□ -1.53
ACSM3-201ENST00000289416 MORC1Q86VD1 984 aa5.49□□□□□ -1.53
ACSM3-201ENST00000289416 DDX12PQ92771 950 aa5.49□□□□□ -1.53
ACSM3-201ENST00000289416 DDX17Q92841 729 aaKnown RBP5.49□□□□□ -1.53
ACSM3-201ENST00000289416 GGNBP2Q9H3C7 697 aa5.49□□□□□ -1.53
ACSM3-201ENST00000289416 PRKRIP1Q9H875 184 aaPredicted RBP5.49□□□□□ -1.53
ACSM3-201ENST00000289416 CRYBG1Q9Y4K1 1723 aa5.49□□□□□ -1.53
ACSM3-201ENST00000289416 SHPRHQ149N8 1683 aa5.49□□□□□ -1.53
ACSM3-201ENST00000289416 PHRF1Q9P1Y6 1649 aaKnown RBP5.49□□□□□ -1.53
ACSM3-201ENST00000289416 CC2D1BQ5T0F9 858 aaKnown RBP5.49□□□□□ -1.53
ACSM3-201ENST00000289416 KCNH5Q8NCM2 988 aa5.49□□□□□ -1.53
ACSM3-201ENST00000289416 SNRKQ9NRH2 765 aa5.49□□□□□ -1.53
ACSM3-201ENST00000289416 FBXW7Q969H0 707 aa5.48□□□□□ -1.53
ACSM3-201ENST00000289416 PCMTD1Q96MG8 357 aaPredicted RBP5.48□□□□□ -1.53
ACSM3-201ENST00000289416 PHOX2BQ99453 314 aa5.48□□□□□ -1.53
ACSM3-201ENST00000289416 TRPC6Q9Y210 931 aa5.48□□□□□ -1.53
ACSM3-201ENST00000289416 PNPLA6Q8IY17 1366 aa5.48□□□□□ -1.53
ACSM3-201ENST00000289416 ABCA3Q99758 1704 aa5.48□□□□□ -1.53
ACSM3-201ENST00000289416 MYBBP1AQ9BQG0 1328 aaKnown RBP5.48□□□□□ -1.53
ACSM3-201ENST00000289416 GNPATO15228 680 aa5.48□□□□□ -1.53
ACSM3-201ENST00000289416 FAM161AQ3B820 660 aa5.48□□□□□ -1.53
ACSM3-201ENST00000289416 FBXO41Q8TF61 875 aa5.48□□□□□ -1.53
ACSM3-201ENST00000289416 ABCC6O95255 1503 aa5.48□□□□□ -1.53
ACSM3-201ENST00000289416 KIF24Q5T7B8 1368 aa5.48□□□□□ -1.53
ACSM3-201ENST00000289416 JCADQ9P266 1359 aa5.48□□□□□ -1.53
ACSM3-201ENST00000289416 SMG6Q86US8 1419 aaKnown RBP5.48□□□□□ -1.53
ACSM3-201ENST00000289416 NFAT5O94916 1531 aa5.48□□□□□ -1.53
ACSM3-201ENST00000289416 OXER1Q8TDS5 423 aa5.47□□□□□ -1.53
ACSM3-201ENST00000289416 ZRANB1Q9UGI0 708 aa5.47□□□□□ -1.53
ACSM3-201ENST00000289416 COG6Q9Y2V7 657 aa5.47□□□□□ -1.53
ACSM3-201ENST00000289416 FARP1Q9Y4F1 1045 aaPredicted RBP5.47□□□□□ -1.53
ACSM3-201ENST00000289416 RTL1A6NKG5 1358 aa5.47□□□□□ -1.53
ACSM3-201ENST00000289416 CPDO75976 1380 aa5.47□□□□□ -1.53
ACSM3-201ENST00000289416 GCP02774 474 aa5.47□□□□□ -1.53
ACSM3-201ENST00000289416 PPP2R1AP30153 589 aa5.47□□□□□ -1.53
ACSM3-201ENST00000289416 NUTM2GQ5VZR2 741 aa5.47□□□□□ -1.53
ACSM3-201ENST00000289416 CDK12Q9NYV4 1490 aaPredicted RBP5.46□□□□□ -1.54
ACSM3-201ENST00000289416 CCER2I3L3R5 266 aa5.46□□□□□ -1.54
ACSM3-201ENST00000289416 OSBPP22059 807 aa5.46□□□□□ -1.54
ACSM3-201ENST00000289416 DPY19L2Q6NUT2 758 aa5.46□□□□□ -1.54
ACSM3-201ENST00000289416 UPF1Q92900 1129 aaKnown RBP eCLIP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms