RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 USP37Q86T82 979 aa4.77□□□□□ -1.65
SCN3A-201ENST00000283254 SLC4A3P48751 1232 aa4.77□□□□□ -1.65
SCN3A-201ENST00000283254 MTHFSP49914 203 aa4.77□□□□□ -1.65
SCN3A-201ENST00000283254 TMEM266Q2M3C6 531 aa4.77□□□□□ -1.65
SCN3A-201ENST00000283254 DDX12PQ92771 950 aa4.77□□□□□ -1.65
SCN3A-201ENST00000283254 LNPKQ9C0E8 428 aa4.77□□□□□ -1.65
SCN3A-201ENST00000283254 IFIT1P09914 478 aaKnown RBP4.77□□□□□ -1.65
SCN3A-201ENST00000283254 CAVIN4Q5BKX8 364 aa4.77□□□□□ -1.65
SCN3A-201ENST00000283254 SLC26A8Q96RN1 970 aa4.77□□□□□ -1.65
SCN3A-201ENST00000283254 LRRCC1Q9C099 1032 aa4.77□□□□□ -1.65
SCN3A-201ENST00000283254 U3KPZ7 1027 aaPredicted RBP4.77□□□□□ -1.65
SCN3A-201ENST00000283254 SERPINC1P01008 464 aa4.77□□□□□ -1.65
SCN3A-201ENST00000283254 NEK4P51957 841 aa4.77□□□□□ -1.65
SCN3A-201ENST00000283254 STXBP4Q6ZWJ1 553 aa4.77□□□□□ -1.65
SCN3A-201ENST00000283254 LRP2BPQ9P2M1 347 aa4.77□□□□□ -1.65
SCN3A-201ENST00000283254 SPDYE4A6NLX3 237 aa4.77□□□□□ -1.65
SCN3A-201ENST00000283254 MATR3P43243 847 aaKnown RBP eCLIP4.77□□□□□ -1.65
SCN3A-201ENST00000283254 HOOK3Q86VS8 718 aa4.77□□□□□ -1.65
SCN3A-201ENST00000283254 TCP11L2Q8N4U5 519 aa4.77□□□□□ -1.65
SCN3A-201ENST00000283254 IFT140Q96RY7 1462 aa4.77□□□□□ -1.65
SCN3A-201ENST00000283254 NCOA2Q15596 1464 aa4.76□□□□□ -1.65
SCN3A-201ENST00000283254 GOLGA6L10A0A0M3HER8 536 aa4.76□□□□□ -1.65
SCN3A-201ENST00000283254 ANKRD62A6NC57 917 aa4.76□□□□□ -1.65
SCN3A-201ENST00000283254 SSBP05455 408 aaKnown RBP eCLIP4.76□□□□□ -1.65
SCN3A-201ENST00000283254 HMGB1P09429 215 aaKnown RBP4.76□□□□□ -1.65
SCN3A-201ENST00000283254 ZNF397Q8NF99 534 aaPredicted RBP4.76□□□□□ -1.65
SCN3A-201ENST00000283254 CTCFLQ8NI51 663 aaPredicted RBP4.76□□□□□ -1.65
SCN3A-201ENST00000283254 GGNBP2Q9H3C7 697 aa4.76□□□□□ -1.65
SCN3A-201ENST00000283254 HMGXB3Q12766 1538 aa4.76□□□□□ -1.65
SCN3A-201ENST00000283254 AMOTQ4VCS5 1084 aa4.76□□□□□ -1.65
SCN3A-201ENST00000283254 ARHGAP29Q52LW3 1261 aa4.76□□□□□ -1.65
SCN3A-201ENST00000283254 FMNL2Q96PY5 1086 aa4.76□□□□□ -1.65
SCN3A-201ENST00000283254 PYM1Q9BRP8 204 aaKnown RBP4.76□□□□□ -1.65
SCN3A-201ENST00000283254 ZHX3Q9H4I2 956 aa4.76□□□□□ -1.65
SCN3A-201ENST00000283254 PRG4Q92954 1404 aaPredicted RBP4.76□□□□□ -1.65
SCN3A-201ENST00000283254 HMGB1P1B2RPK0 211 aaPredicted RBP4.76□□□□□ -1.65
SCN3A-201ENST00000283254 NUTM2GQ5VZR2 741 aa4.76□□□□□ -1.65
SCN3A-201ENST00000283254 LRRC45Q96CN5 670 aa4.76□□□□□ -1.65
SCN3A-201ENST00000283254 A0A087WZG4 1122 aa4.76□□□□□ -1.65
SCN3A-201ENST00000283254 DRC1Q96MC2 740 aa4.76□□□□□ -1.65
SCN3A-201ENST00000283254 EPRSP07814 1512 aaKnown RBP4.76□□□□□ -1.65
SCN3A-201ENST00000283254 ERICH3Q5RHP9 1530 aa4.76□□□□□ -1.65
SCN3A-201ENST00000283254 EHBP1L1Q8N3D4 1523 aa4.76□□□□□ -1.65
SCN3A-201ENST00000283254 C9orf84Q5VXU9 1444 aa4.76□□□□□ -1.65
SCN3A-201ENST00000283254 VSIG10Q8N0Z9 540 aa4.76□□□□□ -1.65
SCN3A-201ENST00000283254 TSPY26PQ9H489 355 aa4.76□□□□□ -1.65
SCN3A-201ENST00000283254 CRBNQ96SW2 442 aa4.76□□□□□ -1.65
SCN3A-201ENST00000283254 SEPT11Q9NVA2 429 aaKnown RBP4.76□□□□□ -1.65
SCN3A-201ENST00000283254 KAT6BQ8WYB5 2073 aa4.76□□□□□ -1.65
SCN3A-201ENST00000283254 TEX13AQ9BXU3 409 aaPredicted RBP4.76□□□□□ -1.65
SCN3A-201ENST00000283254 GBP3Q9H0R5 595 aa4.76□□□□□ -1.65
SCN3A-201ENST00000283254 HECW1Q76N89 1606 aa4.76□□□□□ -1.65
SCN3A-201ENST00000283254 FIBPO43427 364 aa4.75□□□□□ -1.65
SCN3A-201ENST00000283254 LDHCP07864 332 aa4.75□□□□□ -1.65
SCN3A-201ENST00000283254 BLOC1S2Q6QNY1 142 aa4.75□□□□□ -1.65
SCN3A-201ENST00000283254 NUP133Q8WUM0 1156 aa4.75□□□□□ -1.65
SCN3A-201ENST00000283254 FERMT2Q96AC1 680 aa4.75□□□□□ -1.65
SCN3A-201ENST00000283254 CABP2Q9NPB3 220 aa4.75□□□□□ -1.65
SCN3A-201ENST00000283254 TMOD3Q9NYL9 352 aa4.75□□□□□ -1.65
SCN3A-201ENST00000283254 FOSBP53539 338 aa4.75□□□□□ -1.65
SCN3A-201ENST00000283254 EIF5P55010 431 aaKnown RBP4.75□□□□□ -1.65
SCN3A-201ENST00000283254 TSG101Q99816 390 aa4.75□□□□□ -1.65
SCN3A-201ENST00000283254 MCM3P25205 808 aa4.75□□□□□ -1.65
SCN3A-201ENST00000283254 TTLL12Q14166 644 aaPredicted RBP4.75□□□□□ -1.65
SCN3A-201ENST00000283254 SMC1AQ14683 1233 aaKnown RBP4.75□□□□□ -1.65
SCN3A-201ENST00000283254 TNMDQ9H2S6 317 aa4.75□□□□□ -1.65
SCN3A-201ENST00000283254 ABCC11Q96J66 1382 aa4.75□□□□□ -1.65
SCN3A-201ENST00000283254 KIF5BP33176 963 aa4.75□□□□□ -1.65
SCN3A-201ENST00000283254 EXOC6Q8TAG9 804 aa4.75□□□□□ -1.65
SCN3A-201ENST00000283254 PLEKHH1Q9ULM0 1364 aa4.75□□□□□ -1.65
SCN3A-201ENST00000283254 FKBP15Q5T1M5 1219 aa4.75□□□□□ -1.65
SCN3A-201ENST00000283254 SPTY2D1Q68D10 685 aaPredicted RBP4.75□□□□□ -1.65
SCN3A-201ENST00000283254 AACSQ86V21 672 aa4.75□□□□□ -1.65
SCN3A-201ENST00000283254 PPM1EQ8WY54 764 aa4.75□□□□□ -1.65
SCN3A-201ENST00000283254 RPGRQ92834 1020 aaKnown RBP4.75□□□□□ -1.65
SCN3A-201ENST00000283254 ANKIB1Q9P2G1 1089 aa4.75□□□□□ -1.65
SCN3A-201ENST00000283254 CIZ1Q9ULV3 898 aaPredicted RBP4.75□□□□□ -1.65
SCN3A-201ENST00000283254 MRC2Q9UBG0 1479 aa4.75□□□□□ -1.65
SCN3A-201ENST00000283254 FAM177BA6PVY3 158 aa4.75□□□□□ -1.65
SCN3A-201ENST00000283254 SMTNL1A8MU46 457 aa4.75□□□□□ -1.65
SCN3A-201ENST00000283254 MAP3K12Q12852 859 aa4.75□□□□□ -1.65
SCN3A-201ENST00000283254 ERMNQ8TAM6 284 aa4.75□□□□□ -1.65
SCN3A-201ENST00000283254 MYO1BO43795 1136 aa4.75□□□□□ -1.65
SCN3A-201ENST00000283254 CAVIN2O95810 425 aa4.75□□□□□ -1.65
SCN3A-201ENST00000283254 SLC4A2P04920 1241 aa4.75□□□□□ -1.65
SCN3A-201ENST00000283254 GIGYF2Q6Y7W6 1299 aaKnown RBP4.75□□□□□ -1.65
SCN3A-201ENST00000283254 DZIP1Q86YF9 867 aaKnown RBP4.75□□□□□ -1.65
SCN3A-201ENST00000283254 SSX2IPQ9Y2D8 614 aa4.75□□□□□ -1.65
SCN3A-201ENST00000283254 CCDC194A0A1B0GVG4 234 aa4.74□□□□□ -1.65
SCN3A-201ENST00000283254 FCHSD2O94868 740 aa4.74□□□□□ -1.65
SCN3A-201ENST00000283254 ACTN2P35609 894 aa4.74□□□□□ -1.65
SCN3A-201ENST00000283254 PPM1FP49593 454 aaPredicted RBP4.74□□□□□ -1.65
SCN3A-201ENST00000283254 SPA17Q15506 151 aa4.74□□□□□ -1.65
SCN3A-201ENST00000283254 LARP1Q6PKG0 1096 aaKnown RBP4.74□□□□□ -1.65
SCN3A-201ENST00000283254 PAXIP1Q6ZW49 1069 aaPredicted RBP4.74□□□□□ -1.65
SCN3A-201ENST00000283254 PRAM1Q96QH2 718 aa4.74□□□□□ -1.65
SCN3A-201ENST00000283254 PLVAPQ9BX97 442 aa4.74□□□□□ -1.65
SCN3A-201ENST00000283254 SCAND2PQ9GZW5 306 aaPredicted RBP4.74□□□□□ -1.65
SCN3A-201ENST00000283254 TAOK3Q9H2K8 898 aa4.74□□□□□ -1.65
SCN3A-201ENST00000283254 HLA-DOAP06340 250 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms