RNA–Protein interactions for RNA: ENST00000281821.6

EPHA4-201, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA4, Length 6,346 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-201ENST00000281821 DZIP1LQ8IYY4 767 aaKnown RBP9.72□□□□□ -0.85
EPHA4-201ENST00000281821 ERBB4Q15303 1308 aa9.72□□□□□ -0.85
EPHA4-201ENST00000281821 CDC42BPGQ6DT37 1551 aa9.72□□□□□ -0.85
EPHA4-201ENST00000281821 SNRPA1P09661 255 aaKnown RBP9.72□□□□□ -0.85
EPHA4-201ENST00000281821 CHRNA2Q15822 529 aa9.72□□□□□ -0.85
EPHA4-201ENST00000281821 HSP90AB2PQ58FF8 381 aa9.72□□□□□ -0.85
EPHA4-201ENST00000281821 CARD14Q9BXL6 1004 aa9.72□□□□□ -0.85
EPHA4-201ENST00000281821 DBF4Q9UBU7 674 aaPredicted RBP9.72□□□□□ -0.85
EPHA4-201ENST00000281821 CHMP4CQ96CF2 233 aa9.71□□□□□ -0.85
EPHA4-201ENST00000281821 PTPRUQ92729 1446 aa9.71□□□□□ -0.85
EPHA4-201ENST00000281821 PRR36Q9H6K5 1346 aa9.71□□□□□ -0.85
EPHA4-201ENST00000281821 ERVV-2B6SEH9 535 aa9.71□□□□□ -0.86
EPHA4-201ENST00000281821 EIF2S2P20042 333 aaKnown RBP9.71□□□□□ -0.86
EPHA4-201ENST00000281821 IQSEC2Q5JU85 1478 aa9.71□□□□□ -0.86
EPHA4-201ENST00000281821 SOS2Q07890 1332 aaPredicted RBP9.71□□□□□ -0.86
EPHA4-201ENST00000281821 GORABQ5T7V8 394 aa9.71□□□□□ -0.86
EPHA4-201ENST00000281821 LARP1Q6PKG0 1096 aaKnown RBP9.71□□□□□ -0.86
EPHA4-201ENST00000281821 BAG6P46379 1132 aa9.7□□□□□ -0.86
EPHA4-201ENST00000281821 UNC5CLQ8IV45 518 aa9.7□□□□□ -0.86
EPHA4-201ENST00000281821 MAP3K5Q99683 1374 aa9.7□□□□□ -0.86
EPHA4-201ENST00000281821 G3V3G9 751 aa9.7□□□□□ -0.86
EPHA4-201ENST00000281821 DCAF8Q5TAQ9 597 aa9.7□□□□□ -0.86
EPHA4-201ENST00000281821 CFAP65Q6ZU64 1925 aaKnown RBP9.7□□□□□ -0.86
EPHA4-201ENST00000281821 FAM196AQ6ZSG2 479 aa9.69□□□□□ -0.86
EPHA4-201ENST00000281821 ADAMTSL3P82987 1691 aa9.69□□□□□ -0.86
EPHA4-201ENST00000281821 ERC1Q8IUD2 1116 aa9.69□□□□□ -0.86
EPHA4-201ENST00000281821 EYA1Q99502 592 aa9.69□□□□□ -0.86
EPHA4-201ENST00000281821 SRCIN1Q9C0H9 1055 aa9.69□□□□□ -0.86
EPHA4-201ENST00000281821 SLC4A10Q6U841 1118 aa9.69□□□□□ -0.86
EPHA4-201ENST00000281821 CDK12Q9NYV4 1490 aaPredicted RBP9.68□□□□□ -0.86
EPHA4-201ENST00000281821 ZPR1O75312 459 aa9.68□□□□□ -0.86
EPHA4-201ENST00000281821 SUPT16HQ9Y5B9 1047 aaKnown RBP9.68□□□□□ -0.86
EPHA4-201ENST00000281821 RBM6P78332 1123 aaKnown RBP9.68□□□□□ -0.86
EPHA4-201ENST00000281821 MCCP23508 829 aa9.68□□□□□ -0.86
EPHA4-201ENST00000281821 RXRBP28702 533 aa9.68□□□□□ -0.86
EPHA4-201ENST00000281821 FBXO41Q8TF61 875 aa9.68□□□□□ -0.86
EPHA4-201ENST00000281821 ARHGAP45Q92619 1136 aa9.68□□□□□ -0.86
EPHA4-201ENST00000281821 IL13P35225 146 aa9.67□□□□□ -0.86
EPHA4-201ENST00000281821 ADGRB1O14514 1584 aa9.67□□□□□ -0.86
EPHA4-201ENST00000281821 PTPRCP08575 1304 aa9.67□□□□□ -0.86
EPHA4-201ENST00000281821 ERBB3P21860 1342 aa9.67□□□□□ -0.86
EPHA4-201ENST00000281821 CPSF1Q10570 1443 aaKnown RBP9.67□□□□□ -0.86
EPHA4-201ENST00000281821 ANP32AP39687 249 aaKnown RBP9.67□□□□□ -0.86
EPHA4-201ENST00000281821 AK7Q96M32 723 aa9.67□□□□□ -0.86
EPHA4-201ENST00000281821 UBTFL1P0CB47 393 aaPredicted RBP9.67□□□□□ -0.86
EPHA4-201ENST00000281821 G3BP1Q13283 466 aaKnown RBP eCLIP9.66□□□□□ -0.86
EPHA4-201ENST00000281821 NCAPD2Q15021 1401 aa9.66□□□□□ -0.86
EPHA4-201ENST00000281821 KIAA0232Q92628 1395 aa9.66□□□□□ -0.86
EPHA4-201ENST00000281821 CPDO75976 1380 aa9.66□□□□□ -0.86
EPHA4-201ENST00000281821 IGSF1Q8N6C5 1336 aa9.66□□□□□ -0.86
EPHA4-201ENST00000281821 USP19O94966 1318 aa9.66□□□□□ -0.86
EPHA4-201ENST00000281821 EXOSC9Q06265 439 aaKnown RBP9.66□□□□□ -0.86
EPHA4-201ENST00000281821 CHMP3Q9Y3E7 222 aa9.66□□□□□ -0.86
EPHA4-201ENST00000281821 CABLES1Q8TDN4 633 aa9.65□□□□□ -0.86
EPHA4-201ENST00000281821 SLFN5Q08AF3 891 aa9.65□□□□□ -0.86
EPHA4-201ENST00000281821 STK32BQ9NY57 414 aa9.65□□□□□ -0.86
EPHA4-201ENST00000281821 DDRGK1Q96HY6 314 aa9.65□□□□□ -0.87
EPHA4-201ENST00000281821 ELL2O00472 640 aaPredicted RBP9.65□□□□□ -0.87
EPHA4-201ENST00000281821 MST1RQ04912 1400 aa9.64□□□□□ -0.87
EPHA4-201ENST00000281821 RRP1P56182 461 aaKnown RBP9.64□□□□□ -0.87
EPHA4-201ENST00000281821 DUSP27Q5VZP5 1158 aa9.64□□□□□ -0.87
EPHA4-201ENST00000281821 NOL10Q9BSC4 688 aaKnown RBP9.64□□□□□ -0.87
EPHA4-201ENST00000281821 MPRIPQ6WCQ1 1025 aa9.64□□□□□ -0.87
EPHA4-201ENST00000281821 PPP1R42Q7Z4L9 355 aa9.64□□□□□ -0.87
EPHA4-201ENST00000281821 BCL11BQ9C0K0 894 aaPredicted RBP9.64□□□□□ -0.87
EPHA4-201ENST00000281821 QTRT2Q9H974 415 aaKnown RBP9.64□□□□□ -0.87
EPHA4-201ENST00000281821 RPAP2Q8IXW5 612 aaPredicted RBP9.64□□□□□ -0.87
EPHA4-201ENST00000281821 GNL3LQ9NVN8 582 aaKnown RBP9.64□□□□□ -0.87
EPHA4-201ENST00000281821 VPS72Q15906 364 aa9.64□□□□□ -0.87
EPHA4-201ENST00000281821 OVOS2A0A0G2JMS6 1433 aa9.63□□□□□ -0.87
EPHA4-201ENST00000281821 OVOS2A0A0J9YW53 1432 aa9.63□□□□□ -0.87
EPHA4-201ENST00000281821 OVOS2Q6IE36 1432 aa9.63□□□□□ -0.87
EPHA4-201ENST00000281821 C3P01024 1663 aa9.63□□□□□ -0.87
EPHA4-201ENST00000281821 ALDH1L1O75891 902 aa9.63□□□□□ -0.87
EPHA4-201ENST00000281821 SLC4A2P04920 1241 aa9.63□□□□□ -0.87
EPHA4-201ENST00000281821 KIAA1211Q6ZU35 1233 aa9.63□□□□□ -0.87
EPHA4-201ENST00000281821 ERC2O15083 957 aa9.63□□□□□ -0.87
EPHA4-201ENST00000281821 RNMTO43148 476 aaKnown RBP9.63□□□□□ -0.87
EPHA4-201ENST00000281821 POLD1P28340 1107 aa9.63□□□□□ -0.87
EPHA4-201ENST00000281821 PDZRN3Q9UPQ7 1066 aa9.63□□□□□ -0.87
EPHA4-201ENST00000281821 KCNJ4P48050 445 aa9.63□□□□□ -0.87
EPHA4-201ENST00000281821 ATF7IPQ6VMQ6 1270 aa9.62□□□□□ -0.87
EPHA4-201ENST00000281821 CENPQQ7L2Z9 268 aaPredicted RBP9.62□□□□□ -0.87
EPHA4-201ENST00000281821 NYXQ9GZU5 481 aa9.62□□□□□ -0.87
EPHA4-201ENST00000281821 PARP10Q53GL7 1025 aa9.62□□□□□ -0.87
EPHA4-201ENST00000281821 RSPH6AQ9H0K4 717 aa9.62□□□□□ -0.87
EPHA4-201ENST00000281821 GNAI2P04899 355 aa9.62□□□□□ -0.87
EPHA4-201ENST00000281821 HSP90AA1P07900 732 aaKnown RBP9.62□□□□□ -0.87
EPHA4-201ENST00000281821 BECN1Q14457 450 aa9.62□□□□□ -0.87
EPHA4-201ENST00000281821 FRAT2O75474 233 aaPredicted RBP9.62□□□□□ -0.87
EPHA4-201ENST00000281821 AMOTL1Q8IY63 956 aa9.62□□□□□ -0.87
EPHA4-201ENST00000281821 IQGAP1P46940 1657 aa9.61□□□□□ -0.87
EPHA4-201ENST00000281821 RUFY2Q8WXA3 655 aa9.61□□□□□ -0.87
EPHA4-201ENST00000281821 RTCBQ9Y3I0 505 aaKnown RBP9.61□□□□□ -0.87
EPHA4-201ENST00000281821 VSIG10Q8N0Z9 540 aa9.61□□□□□ -0.87
EPHA4-201ENST00000281821 CRB1P82279 1406 aa9.61□□□□□ -0.87
EPHA4-201ENST00000281821 BARGINQ6ZT62 677 aa9.61□□□□□ -0.87
EPHA4-201ENST00000281821 CCDC125Q86Z20 511 aa9.61□□□□□ -0.87
EPHA4-201ENST00000281821 USHBP1Q8N6Y0 703 aa9.61□□□□□ -0.87
EPHA4-201ENST00000281821 USP32Q8NFA0 1604 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms