RNA–Protein interactions for RNA: ENST00000278302.9

TRIM6-201, Transcript of tripartite motif containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM6, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-201ENST00000278302 RAB3GAP1Q15042 981 aa9.39□□□□□ -0.91
TRIM6-201ENST00000278302 PLCD3Q8N3E9 789 aa9.39□□□□□ -0.91
TRIM6-201ENST00000278302 MAP2P11137 1827 aaKnown RBP9.39□□□□□ -0.91
TRIM6-201ENST00000278302 SMC5Q8IY18 1101 aa9.38□□□□□ -0.91
TRIM6-201ENST00000278302 REREQ9P2R6 1566 aa9.38□□□□□ -0.91
TRIM6-201ENST00000278302 CD2BP2O95400 341 aaKnown RBP9.38□□□□□ -0.91
TRIM6-201ENST00000278302 MAPK8IP2Q13387 824 aaPredicted RBP9.38□□□□□ -0.91
TRIM6-201ENST00000278302 CAVIN1Q6NZI2 390 aaKnown RBP9.38□□□□□ -0.91
TRIM6-201ENST00000278302 TSPYL6Q8N831 410 aa9.38□□□□□ -0.91
TRIM6-201ENST00000278302 LNPKQ9C0E8 428 aa9.38□□□□□ -0.91
TRIM6-201ENST00000278302 RBSNQ9H1K0 784 aa9.38□□□□□ -0.91
TRIM6-201ENST00000278302 IFT57Q9NWB7 429 aa9.38□□□□□ -0.91
TRIM6-201ENST00000278302 CPSF1Q10570 1443 aaKnown RBP9.37□□□□□ -0.91
TRIM6-201ENST00000278302 NUTM2FA1L443 756 aa9.37□□□□□ -0.91
TRIM6-201ENST00000278302 MPNDQ8N594 471 aa9.37□□□□□ -0.91
TRIM6-201ENST00000278302 MRPL50Q8N5N7 158 aaKnown RBP9.37□□□□□ -0.91
TRIM6-201ENST00000278302 MBIPQ9NS73 344 aa9.37□□□□□ -0.91
TRIM6-201ENST00000278302 TWISTNBQ3B726 338 aaPredicted RBP9.37□□□□□ -0.91
TRIM6-201ENST00000278302 SASS6Q6UVJ0 657 aa9.37□□□□□ -0.91
TRIM6-201ENST00000278302 TMEM51Q9NW97 253 aa9.37□□□□□ -0.91
TRIM6-201ENST00000278302 DNTTIP2Q5QJE6 756 aaKnown RBP9.37□□□□□ -0.91
TRIM6-201ENST00000278302 ZKSCAN5Q9Y2L8 839 aa9.37□□□□□ -0.91
TRIM6-201ENST00000278302 SPDYE4A6NLX3 237 aa9.36□□□□□ -0.91
TRIM6-201ENST00000278302 ANKRD45Q5TZF3 282 aa9.36□□□□□ -0.91
TRIM6-201ENST00000278302 SIRT1Q96EB6 747 aa9.36□□□□□ -0.91
TRIM6-201ENST00000278302 C1orf115Q9H7X2 142 aa9.36□□□□□ -0.91
TRIM6-201ENST00000278302 CDC42BPGQ6DT37 1551 aa9.36□□□□□ -0.91
TRIM6-201ENST00000278302 FAM83GA6ND36 823 aa9.36□□□□□ -0.91
TRIM6-201ENST00000278302 NUCB1Q02818 461 aa9.36□□□□□ -0.91
TRIM6-201ENST00000278302 DCTN1Q14203 1278 aa9.36□□□□□ -0.91
TRIM6-201ENST00000278302 ATP2B3Q16720 1220 aa9.36□□□□□ -0.91
TRIM6-201ENST00000278302 CHD1LQ86WJ1 897 aa9.36□□□□□ -0.91
TRIM6-201ENST00000278302 NCOA3Q9Y6Q9 1424 aa9.36□□□□□ -0.91
TRIM6-201ENST00000278302 AATKQ6ZMQ8 1374 aa9.36□□□□□ -0.91
TRIM6-201ENST00000278302 BRPF1P55201 1214 aaPredicted RBP9.35□□□□□ -0.91
TRIM6-201ENST00000278302 ARHGAP45Q92619 1136 aa9.35□□□□□ -0.91
TRIM6-201ENST00000278302 CFAP44Q96MT7 982 aa9.35□□□□□ -0.91
TRIM6-201ENST00000278302 TNRQ92752 1358 aa9.35□□□□□ -0.91
TRIM6-201ENST00000278302 ZBTB7BO15156 539 aaPredicted RBP9.35□□□□□ -0.91
TRIM6-201ENST00000278302 PRIM1P49642 420 aaKnown RBP9.35□□□□□ -0.91
TRIM6-201ENST00000278302 RBM42Q9BTD8 480 aaKnown RBP9.35□□□□□ -0.91
TRIM6-201ENST00000278302 CDK12Q9NYV4 1490 aaPredicted RBP9.35□□□□□ -0.91
TRIM6-201ENST00000278302 SOX12O15370 315 aa9.35□□□□□ -0.91
TRIM6-201ENST00000278302 KLHL40Q2TBA0 621 aa9.35□□□□□ -0.91
TRIM6-201ENST00000278302 ZSCAN23Q3MJ62 389 aa9.35□□□□□ -0.91
TRIM6-201ENST00000278302 MCTP1Q6DN14 999 aa9.35□□□□□ -0.91
TRIM6-201ENST00000278302 PLPPR3Q6T4P5 718 aa9.35□□□□□ -0.91
TRIM6-201ENST00000278302 ZNF710Q8N1W2 664 aa9.35□□□□□ -0.91
TRIM6-201ENST00000278302 C8orf58Q8NAV2 365 aa9.35□□□□□ -0.91
TRIM6-201ENST00000278302 SETD1AO15047 1707 aaKnown RBP9.35□□□□□ -0.91
TRIM6-201ENST00000278302 GOLGA6L22H0YM25 854 aa9.34□□□□□ -0.91
TRIM6-201ENST00000278302 ZNF853P0CG23 659 aa9.34□□□□□ -0.91
TRIM6-201ENST00000278302 SULT6B1Q6IMI4 303 aa9.34□□□□□ -0.91
TRIM6-201ENST00000278302 CSPP1Q1MSJ5 1256 aa9.34□□□□□ -0.91
TRIM6-201ENST00000278302 GCC1Q96CN9 775 aa9.34□□□□□ -0.91
TRIM6-201ENST00000278302 ZNF830Q96NB3 372 aaPredicted RBP9.34□□□□□ -0.91
TRIM6-201ENST00000278302 API5Q9BZZ5 524 aaKnown RBP9.34□□□□□ -0.91
TRIM6-201ENST00000278302 RBM27Q9P2N5 1060 aaKnown RBP9.34□□□□□ -0.91
TRIM6-201ENST00000278302 CPS1P31327 1500 aa9.34□□□□□ -0.91
TRIM6-201ENST00000278302 PRR36Q9H6K5 1346 aa9.34□□□□□ -0.91
TRIM6-201ENST00000278302 BAG4O95429 457 aaKnown RBP9.33□□□□□ -0.92
TRIM6-201ENST00000278302 RNF214Q8ND24 703 aa9.33□□□□□ -0.92
TRIM6-201ENST00000278302 PDLIM2Q96JY6 352 aa9.33□□□□□ -0.92
TRIM6-201ENST00000278302 CGNQ9P2M7 1197 aaKnown RBP9.33□□□□□ -0.92
TRIM6-201ENST00000278302 GAS2L2Q8NHY3 880 aa9.33□□□□□ -0.92
TRIM6-201ENST00000278302 ACEP12821 1306 aa9.33□□□□□ -0.92
TRIM6-201ENST00000278302 TTC21BQ7Z4L5 1316 aa9.33□□□□□ -0.92
TRIM6-201ENST00000278302 NRXN3Q9Y4C0 1643 aa9.33□□□□□ -0.92
TRIM6-201ENST00000278302 HS1BP3Q53T59 392 aa9.33□□□□□ -0.92
TRIM6-201ENST00000278302 AEBP1Q8IUX7 1158 aa9.33□□□□□ -0.92
TRIM6-201ENST00000278302 CIZ1Q9ULV3 898 aaPredicted RBP9.33□□□□□ -0.92
TRIM6-201ENST00000278302 TMEM2Q9UHN6 1383 aa9.32□□□□□ -0.92
TRIM6-201ENST00000278302 KIF20AO95235 890 aa9.32□□□□□ -0.92
TRIM6-201ENST00000278302 EIF4A2Q14240 407 aaKnown RBP9.32□□□□□ -0.92
TRIM6-201ENST00000278302 ROBO2Q9HCK4 1378 aa9.32□□□□□ -0.92
TRIM6-201ENST00000278302 CHAMP1Q96JM3 812 aa9.32□□□□□ -0.92
TRIM6-201ENST00000278302 GTPBP4Q9BZE4 634 aaKnown RBP9.32□□□□□ -0.92
TRIM6-201ENST00000278302 SLC26A8Q96RN1 970 aa9.31□□□□□ -0.92
TRIM6-201ENST00000278302 LETM1O95202 739 aaPredicted RBP9.31□□□□□ -0.92
TRIM6-201ENST00000278302 PTMAP06454 111 aaKnown RBP9.31□□□□□ -0.92
TRIM6-201ENST00000278302 ZNF445P59923 1031 aa9.31□□□□□ -0.92
TRIM6-201ENST00000278302 SNX21Q969T3 373 aa9.31□□□□□ -0.92
TRIM6-201ENST00000278302 PTCH1Q13635 1447 aa9.31□□□□□ -0.92
TRIM6-201ENST00000278302 HAP1P54257 671 aaPredicted RBP9.31□□□□□ -0.92
TRIM6-201ENST00000278302 PKP1Q13835 747 aa9.31□□□□□ -0.92
TRIM6-201ENST00000278302 MCM10Q7L590 875 aa9.31□□□□□ -0.92
TRIM6-201ENST00000278302 C17orf53Q8N3J3 647 aaPredicted RBP9.31□□□□□ -0.92
TRIM6-201ENST00000278302 MYRIPQ8NFW9 859 aa9.31□□□□□ -0.92
TRIM6-201ENST00000278302 IPO4Q8TEX9 1081 aaKnown RBP9.31□□□□□ -0.92
TRIM6-201ENST00000278302 EID1Q9Y6B2 187 aa9.31□□□□□ -0.92
TRIM6-201ENST00000278302 ABCC4O15439 1325 aa9.31□□□□□ -0.92
TRIM6-201ENST00000278302 TECPR2O15040 1411 aa9.3□□□□□ -0.92
TRIM6-201ENST00000278302 PTMSP20962 102 aa9.3□□□□□ -0.92
TRIM6-201ENST00000278302 RBM25P49756 843 aaKnown RBP9.3□□□□□ -0.92
TRIM6-201ENST00000278302 HSP90AB2PQ58FF8 381 aa9.3□□□□□ -0.92
TRIM6-201ENST00000278302 PAXIP1Q6ZW49 1069 aaPredicted RBP9.3□□□□□ -0.92
TRIM6-201ENST00000278302 KIF2CQ99661 725 aa9.3□□□□□ -0.92
TRIM6-201ENST00000278302 LTKP29376 864 aa9.3□□□□□ -0.92
TRIM6-201ENST00000278302 CEBPAP49715 358 aaPredicted RBP9.3□□□□□ -0.92
TRIM6-201ENST00000278302 BMP2KLQ5H9B9 411 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms