RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 CAVIN1Q6NZI2 390 aaKnown RBP21.05■□□□□ 0.96
SPG7-201ENST00000268704 COG3Q96JB2 828 aa21.05■□□□□ 0.96
SPG7-201ENST00000268704 EDC4Q6P2E9 1401 aaKnown RBP21.05■□□□□ 0.96
SPG7-201ENST00000268704 LMOD3Q0VAK6 560 aa21.05■□□□□ 0.96
SPG7-201ENST00000268704 MEIS3Q99687 375 aa21.05■□□□□ 0.96
SPG7-201ENST00000268704 CPSF1Q10570 1443 aaKnown RBP21.05■□□□□ 0.96
SPG7-201ENST00000268704 CEP85Q6P2H3 762 aa21.04■□□□□ 0.96
SPG7-201ENST00000268704 TXNDC2Q86VQ3 553 aa21.04■□□□□ 0.96
SPG7-201ENST00000268704 RGS12O14924 1447 aa21.04■□□□□ 0.96
SPG7-201ENST00000268704 PTMSP20962 102 aa21.04■□□□□ 0.96
SPG7-201ENST00000268704 ANKRD44Q8N8A2 993 aa21.04■□□□□ 0.96
SPG7-201ENST00000268704 WASLO00401 505 aaPredicted RBP21.03■□□□□ 0.96
SPG7-201ENST00000268704 INTS3Q68E01 1043 aaKnown RBP21.03■□□□□ 0.96
SPG7-201ENST00000268704 CLEC17AQ6ZS10 378 aa21.03■□□□□ 0.96
SPG7-201ENST00000268704 REREQ9P2R6 1566 aa21.03■□□□□ 0.96
SPG7-201ENST00000268704 SULT6B1Q6IMI4 303 aa21.02■□□□□ 0.96
SPG7-201ENST00000268704 NUDT16Q96DE0 195 aaKnown RBP21.01■□□□□ 0.95
SPG7-201ENST00000268704 FOXD4L5Q5VV16 416 aaPredicted RBP21.01■□□□□ 0.95
SPG7-201ENST00000268704 FOXD4L4Q8WXT5 416 aaPredicted RBP21.01■□□□□ 0.95
SPG7-201ENST00000268704 MIS18AQ9NYP9 233 aa21.01■□□□□ 0.95
SPG7-201ENST00000268704 LMBRD1Q9NUN5 540 aa21.01■□□□□ 0.95
SPG7-201ENST00000268704 CCDC173Q0VFZ6 552 aa21■□□□□ 0.95
SPG7-201ENST00000268704 RBM27Q9P2N5 1060 aaKnown RBP21■□□□□ 0.95
SPG7-201ENST00000268704 RTL1A6NKG5 1358 aa21■□□□□ 0.95
SPG7-201ENST00000268704 CYP2E1P05181 493 aaPredicted RBP21■□□□□ 0.95
SPG7-201ENST00000268704 TSHZ3Q63HK5 1081 aa21■□□□□ 0.95
SPG7-201ENST00000268704 ZSCAN23Q3MJ62 389 aa20.99■□□□□ 0.95
SPG7-201ENST00000268704 SETD1AO15047 1707 aaKnown RBP20.99■□□□□ 0.95
SPG7-201ENST00000268704 SOX12O15370 315 aa20.99■□□□□ 0.95
SPG7-201ENST00000268704 AATKQ6ZMQ8 1374 aa20.99■□□□□ 0.95
SPG7-201ENST00000268704 METP08581 1390 aa20.98■□□□□ 0.95
SPG7-201ENST00000268704 EIF4A2Q14240 407 aaKnown RBP20.98■□□□□ 0.95
SPG7-201ENST00000268704 PPP1R9BQ96SB3 815 aa20.98■□□□□ 0.95
SPG7-201ENST00000268704 DLC1Q96QB1 1528 aa20.98■□□□□ 0.95
SPG7-201ENST00000268704 A2ML1A8K2U0 1454 aa20.98■□□□□ 0.95
SPG7-201ENST00000268704 PRPF40AO75400 957 aaKnown RBP20.98■□□□□ 0.95
SPG7-201ENST00000268704 NUCB2P80303 420 aa20.98■□□□□ 0.95
SPG7-201ENST00000268704 MLECQ14165 292 aa20.98■□□□□ 0.95
SPG7-201ENST00000268704 ZDHHC9Q9Y397 364 aa20.98■□□□□ 0.95
SPG7-201ENST00000268704 NUTM2FA1L443 756 aa20.97■□□□□ 0.95
SPG7-201ENST00000268704 F6X3S4 739 aa20.97■□□□□ 0.95
SPG7-201ENST00000268704 SLC4A10Q6U841 1118 aa20.97■□□□□ 0.95
SPG7-201ENST00000268704 KIF24Q5T7B8 1368 aa20.97■□□□□ 0.95
SPG7-201ENST00000268704 RPAP2Q8IXW5 612 aaPredicted RBP20.96■□□□□ 0.95
SPG7-201ENST00000268704 GPT2Q8TD30 523 aa20.96■□□□□ 0.95
SPG7-201ENST00000268704 RBSNQ9H1K0 784 aa20.96■□□□□ 0.95
SPG7-201ENST00000268704 SLC4A2P04920 1241 aa20.95■□□□□ 0.94
SPG7-201ENST00000268704 IBTKQ9P2D0 1353 aaPredicted RBP20.95■□□□□ 0.94
SPG7-201ENST00000268704 CHL1O00533 1208 aa20.95■□□□□ 0.94
SPG7-201ENST00000268704 ST18O60284 1047 aa20.95■□□□□ 0.94
SPG7-201ENST00000268704 PRIM1P49642 420 aaKnown RBP20.95■□□□□ 0.94
SPG7-201ENST00000268704 G2E3Q7L622 706 aa20.95■□□□□ 0.94
SPG7-201ENST00000268704 ANP32BQ92688 251 aaKnown RBP20.95■□□□□ 0.94
SPG7-201ENST00000268704 CASC1Q6TDU7 716 aa20.94■□□□□ 0.94
SPG7-201ENST00000268704 CCDC61Q9Y6R9 512 aa20.94■□□□□ 0.94
SPG7-201ENST00000268704 ZNF445P59923 1031 aa20.94■□□□□ 0.94
SPG7-201ENST00000268704 ARID3AQ99856 593 aa20.94■□□□□ 0.94
SPG7-201ENST00000268704 NSFL1CQ9UNZ2 370 aaKnown RBP20.94■□□□□ 0.94
SPG7-201ENST00000268704 PRR36Q9H6K5 1346 aa20.93■□□□□ 0.94
SPG7-201ENST00000268704 ZSCAN30Q86W11 494 aa20.93■□□□□ 0.94
SPG7-201ENST00000268704 MON2Q7Z3U7 1717 aa20.93■□□□□ 0.94
SPG7-201ENST00000268704 FOXO3O43524 673 aa20.93■□□□□ 0.94
SPG7-201ENST00000268704 HSP90AB2PQ58FF8 381 aa20.93■□□□□ 0.94
SPG7-201ENST00000268704 NOL8Q76FK4 1167 aaKnown RBP20.93■□□□□ 0.94
SPG7-201ENST00000268704 EXOC6BQ9Y2D4 811 aa20.92■□□□□ 0.94
SPG7-201ENST00000268704 KIAA1211Q6ZU35 1233 aa20.92■□□□□ 0.94
SPG7-201ENST00000268704 ERC2O15083 957 aa20.91■□□□□ 0.94
SPG7-201ENST00000268704 NRXN3Q9Y4C0 1643 aa20.91■□□□□ 0.94
SPG7-201ENST00000268704 C3P01024 1663 aa20.91■□□□□ 0.94
SPG7-201ENST00000268704 REC8O95072 547 aa20.91■□□□□ 0.94
SPG7-201ENST00000268704 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.9■□□□□ 0.94
SPG7-201ENST00000268704 PLEKHG5O94827 1062 aa20.9■□□□□ 0.94
SPG7-201ENST00000268704 NEK4P51957 841 aa20.9■□□□□ 0.94
SPG7-201ENST00000268704 MSNP26038 577 aaKnown RBP20.89■□□□□ 0.94
SPG7-201ENST00000268704 PDE1AP54750 535 aa20.89■□□□□ 0.94
SPG7-201ENST00000268704 TMEM63CQ9P1W3 806 aa20.89■□□□□ 0.94
SPG7-201ENST00000268704 CWC22Q9HCG8 908 aaKnown RBP20.89■□□□□ 0.93
SPG7-201ENST00000268704 PTPRCP08575 1304 aa20.89■□□□□ 0.93
SPG7-201ENST00000268704 RRP9O43818 475 aaKnown RBP20.89■□□□□ 0.93
SPG7-201ENST00000268704 SYCE3A1L190 88 aa20.88■□□□□ 0.93
SPG7-201ENST00000268704 ITSN1Q15811 1721 aa20.88■□□□□ 0.93
SPG7-201ENST00000268704 RIMS1Q86UR5 1692 aaKnown RBP20.88■□□□□ 0.93
SPG7-201ENST00000268704 PALD1Q9ULE6 856 aa20.87■□□□□ 0.93
SPG7-201ENST00000268704 NRKQ7Z2Y5 1582 aa20.87■□□□□ 0.93
SPG7-201ENST00000268704 AKAP12Q02952 1782 aa20.87■□□□□ 0.93
SPG7-201ENST00000268704 FOXD4L6Q3SYB3 417 aaPredicted RBP20.87■□□□□ 0.93
SPG7-201ENST00000268704 FOXD4L3Q6VB84 417 aaPredicted RBP20.87■□□□□ 0.93
SPG7-201ENST00000268704 TMX3Q96JJ7 454 aa20.86■□□□□ 0.93
SPG7-201ENST00000268704 KIAA0232Q92628 1395 aa20.86■□□□□ 0.93
SPG7-201ENST00000268704 NECTIN2Q92692 538 aa20.86■□□□□ 0.93
SPG7-201ENST00000268704 CRB1P82279 1406 aa20.85■□□□□ 0.93
SPG7-201ENST00000268704 PEAK1Q9H792 1746 aa20.85■□□□□ 0.93
SPG7-201ENST00000268704 RNF214Q8ND24 703 aa20.85■□□□□ 0.93
SPG7-201ENST00000268704 TSPYL4Q9UJ04 414 aa20.85■□□□□ 0.93
SPG7-201ENST00000268704 HMMRO75330 724 aa20.84■□□□□ 0.93
SPG7-201ENST00000268704 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.84■□□□□ 0.93
SPG7-201ENST00000268704 TTC21BQ7Z4L5 1316 aa20.84■□□□□ 0.93
SPG7-201ENST00000268704 HAP1P54257 671 aaPredicted RBP20.84■□□□□ 0.93
SPG7-201ENST00000268704 XPCQ01831 940 aaPredicted RBP20.83■□□□□ 0.93
SPG7-201ENST00000268704 MAP3K19Q56UN5 1328 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms