RNA–Protein interactions for RNA: ENST00000267202.6

VPS37B-201, Transcript of VPS37B, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS37B, Length 3,028 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-201ENST00000267202 CEP85Q6P2H3 762 aa22.65■■□□□ 1.22
VPS37B-201ENST00000267202 TTC22Q5TAA0 569 aa22.65■■□□□ 1.22
VPS37B-201ENST00000267202 CHAMP1Q96JM3 812 aa22.65■■□□□ 1.22
VPS37B-201ENST00000267202 NCLP19338 710 aaKnown RBP22.64■■□□□ 1.21
VPS37B-201ENST00000267202 SDSP20132 328 aa22.64■■□□□ 1.21
VPS37B-201ENST00000267202 LTV1Q96GA3 475 aaPredicted RBP22.64■■□□□ 1.21
VPS37B-201ENST00000267202 RAB3GAP1Q15042 981 aa22.63■■□□□ 1.21
VPS37B-201ENST00000267202 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.63■■□□□ 1.21
VPS37B-201ENST00000267202 GRPEL1Q9HAV7 217 aa22.63■■□□□ 1.21
VPS37B-201ENST00000267202 RIMBP3CA6NJZ7 1639 aa22.63■■□□□ 1.21
VPS37B-201ENST00000267202 RIMBP3BA6NNM3 1639 aa22.63■■□□□ 1.21
VPS37B-201ENST00000267202 RIMBP3Q9UFD9 1639 aa22.63■■□□□ 1.21
VPS37B-201ENST00000267202 GBP4Q96PP9 640 aa22.63■■□□□ 1.21
VPS37B-201ENST00000267202 PKP1Q13835 747 aa22.63■■□□□ 1.21
VPS37B-201ENST00000267202 TSPYL4Q9UJ04 414 aa22.63■■□□□ 1.21
VPS37B-201ENST00000267202 EXOC6BQ9Y2D4 811 aa22.63■■□□□ 1.21
VPS37B-201ENST00000267202 ANKRD44Q8N8A2 993 aa22.62■■□□□ 1.21
VPS37B-201ENST00000267202 CHL1O00533 1208 aa22.62■■□□□ 1.21
VPS37B-201ENST00000267202 NOL8Q76FK4 1167 aaKnown RBP22.62■■□□□ 1.21
VPS37B-201ENST00000267202 KNDC1Q76NI1 1749 aa22.61■■□□□ 1.21
VPS37B-201ENST00000267202 AATKQ6ZMQ8 1374 aa22.61■■□□□ 1.21
VPS37B-201ENST00000267202 MTHFSDQ2M296 383 aaKnown RBP22.61■■□□□ 1.21
VPS37B-201ENST00000267202 LTKP29376 864 aa22.61■■□□□ 1.21
VPS37B-201ENST00000267202 INTS3Q68E01 1043 aaKnown RBP22.61■■□□□ 1.21
VPS37B-201ENST00000267202 NCOA3Q9Y6Q9 1424 aa22.6■■□□□ 1.21
VPS37B-201ENST00000267202 MAP3K19Q56UN5 1328 aa22.6■■□□□ 1.21
VPS37B-201ENST00000267202 RTF1Q92541 710 aaKnown RBP22.6■■□□□ 1.21
VPS37B-201ENST00000267202 DLC1Q96QB1 1528 aa22.59■■□□□ 1.21
VPS37B-201ENST00000267202 HSP90AA2PQ14568 343 aaPredicted RBP22.59■■□□□ 1.21
VPS37B-201ENST00000267202 AMPHP49418 695 aa22.57■■□□□ 1.2
VPS37B-201ENST00000267202 MRE11P49959 708 aa22.57■■□□□ 1.2
VPS37B-201ENST00000267202 MCTP1Q6DN14 999 aa22.57■■□□□ 1.2
VPS37B-201ENST00000267202 ZGPATQ8N5A5 531 aaKnown RBP22.57■■□□□ 1.2
VPS37B-201ENST00000267202 NGDNQ8NEJ9 315 aaKnown RBP22.57■■□□□ 1.2
VPS37B-201ENST00000267202 RTL1A6NKG5 1358 aa22.57■■□□□ 1.2
VPS37B-201ENST00000267202 C14orf37Q86TY3 774 aa22.57■■□□□ 1.2
VPS37B-201ENST00000267202 USP26Q9BXU7 913 aa22.57■■□□□ 1.2
VPS37B-201ENST00000267202 NRXN3Q9Y4C0 1643 aa22.57■■□□□ 1.2
VPS37B-201ENST00000267202 ZMYND15Q9H091 742 aa22.57■■□□□ 1.2
VPS37B-201ENST00000267202 DDX49Q9Y6V7 483 aaKnown RBP22.56■■□□□ 1.2
VPS37B-201ENST00000267202 SETD1AO15047 1707 aaKnown RBP22.56■■□□□ 1.2
VPS37B-201ENST00000267202 ATP10DQ9P241 1426 aa22.56■■□□□ 1.2
VPS37B-201ENST00000267202 ZBTB7CA1YPR0 619 aa22.56■■□□□ 1.2
VPS37B-201ENST00000267202 RGS12O14924 1447 aa22.56■■□□□ 1.2
VPS37B-201ENST00000267202 HDGFP51858 240 aaKnown RBP22.54■■□□□ 1.2
VPS37B-201ENST00000267202 CIZ1Q9ULV3 898 aaPredicted RBP22.54■■□□□ 1.2
VPS37B-201ENST00000267202 RPAP2Q8IXW5 612 aaPredicted RBP22.54■■□□□ 1.2
VPS37B-201ENST00000267202 SPATA31D1Q6ZQQ2 1576 aa22.53■■□□□ 1.2
VPS37B-201ENST00000267202 BAG4O95429 457 aaKnown RBP22.53■■□□□ 1.2
VPS37B-201ENST00000267202 USHBP1Q8N6Y0 703 aa22.53■■□□□ 1.2
VPS37B-201ENST00000267202 FKBP5Q13451 457 aaPredicted RBP22.53■■□□□ 1.2
VPS37B-201ENST00000267202 FOXD4L6Q3SYB3 417 aaPredicted RBP22.53■■□□□ 1.2
VPS37B-201ENST00000267202 FOXD4L3Q6VB84 417 aaPredicted RBP22.53■■□□□ 1.2
VPS37B-201ENST00000267202 TPRNQ4KMQ1 711 aa22.52■■□□□ 1.2
VPS37B-201ENST00000267202 RBM33Q96EV2 1170 aaKnown RBP22.52■■□□□ 1.2
VPS37B-201ENST00000267202 EYA1Q99502 592 aa22.52■■□□□ 1.2
VPS37B-201ENST00000267202 TNRQ92752 1358 aa22.52■■□□□ 1.2
VPS37B-201ENST00000267202 ERBB4Q15303 1308 aa22.52■■□□□ 1.2
VPS37B-201ENST00000267202 RILPL2Q969X0 211 aa22.52■■□□□ 1.19
VPS37B-201ENST00000267202 RIMS1Q86UR5 1692 aaKnown RBP22.51■■□□□ 1.19
VPS37B-201ENST00000267202 RABEP1Q15276 862 aa22.51■■□□□ 1.19
VPS37B-201ENST00000267202 PPP6R1Q9UPN7 881 aa22.51■■□□□ 1.19
VPS37B-201ENST00000267202 TRIM6-TRIM34B2RNG4 842 aa22.5■■□□□ 1.19
VPS37B-201ENST00000267202 GLIPR1L2Q4G1C9 344 aa22.5■■□□□ 1.19
VPS37B-201ENST00000267202 CASC1Q6TDU7 716 aa22.5■■□□□ 1.19
VPS37B-201ENST00000267202 AMOTL2Q9Y2J4 779 aa22.5■■□□□ 1.19
VPS37B-201ENST00000267202 CLCN1P35523 988 aa22.49■■□□□ 1.19
VPS37B-201ENST00000267202 NLRP6P59044 892 aa22.49■■□□□ 1.19
VPS37B-201ENST00000267202 DIP2BQ9P265 1576 aa22.49■■□□□ 1.19
VPS37B-201ENST00000267202 GOLGA6L22H0YM25 854 aa22.49■■□□□ 1.19
VPS37B-201ENST00000267202 PNMA6EA0A0J9YXQ4 647 aa22.49■■□□□ 1.19
VPS37B-201ENST00000267202 CAVIN1Q6NZI2 390 aaKnown RBP22.49■■□□□ 1.19
VPS37B-201ENST00000267202 TMEM2Q9UHN6 1383 aa22.48■■□□□ 1.19
VPS37B-201ENST00000267202 MAP4K4O95819 1239 aaPredicted RBP22.48■■□□□ 1.19
VPS37B-201ENST00000267202 STK31Q9BXU1 1019 aa22.48■■□□□ 1.19
VPS37B-201ENST00000267202 PDE1AP54750 535 aa22.47■■□□□ 1.19
VPS37B-201ENST00000267202 IL1RAPL2Q9NP60 686 aa22.47■■□□□ 1.19
VPS37B-201ENST00000267202 TRIM44Q96DX7 344 aaPredicted RBP22.47■■□□□ 1.19
VPS37B-201ENST00000267202 RBM27Q9P2N5 1060 aaKnown RBP22.47■■□□□ 1.19
VPS37B-201ENST00000267202 PTPRCP08575 1304 aa22.47■■□□□ 1.19
VPS37B-201ENST00000267202 ITSN1Q15811 1721 aa22.46■■□□□ 1.19
VPS37B-201ENST00000267202 MON2Q7Z3U7 1717 aa22.46■■□□□ 1.19
VPS37B-201ENST00000267202 C3P01024 1663 aa22.46■■□□□ 1.19
VPS37B-201ENST00000267202 USP6P35125 1406 aa22.46■■□□□ 1.19
VPS37B-201ENST00000267202 CRB1P82279 1406 aa22.46■■□□□ 1.19
VPS37B-201ENST00000267202 HMMRO75330 724 aa22.46■■□□□ 1.19
VPS37B-201ENST00000267202 NEK4P51957 841 aa22.46■■□□□ 1.19
VPS37B-201ENST00000267202 PRPF40AO75400 957 aaKnown RBP22.45■■□□□ 1.18
VPS37B-201ENST00000267202 ESPNB1AK53 854 aa22.45■■□□□ 1.18
VPS37B-201ENST00000267202 DTNBO60941 627 aa22.45■■□□□ 1.18
VPS37B-201ENST00000267202 HAP1P54257 671 aaPredicted RBP22.45■■□□□ 1.18
VPS37B-201ENST00000267202 PEAK1Q9H792 1746 aa22.45■■□□□ 1.18
VPS37B-201ENST00000267202 EIF2S2P20042 333 aaKnown RBP22.44■■□□□ 1.18
VPS37B-201ENST00000267202 FLIIQ13045 1269 aa22.44■■□□□ 1.18
VPS37B-201ENST00000267202 PLEKHG3A1L390 1219 aa22.44■■□□□ 1.18
VPS37B-201ENST00000267202 ERC2O15083 957 aa22.44■■□□□ 1.18
VPS37B-201ENST00000267202 GNAI2P04899 355 aa22.44■■□□□ 1.18
VPS37B-201ENST00000267202 LRRFIP2Q9Y608 721 aaKnown RBP22.44■■□□□ 1.18
VPS37B-201ENST00000267202 ST18O60284 1047 aa22.44■■□□□ 1.18
VPS37B-201ENST00000267202 OVOS2A0A0J9YW53 1432 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms