RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 MST1RQ04912 1400 aa21.47■■□□□ 1.03
CHKA-201ENST00000265689 IGSF1Q8N6C5 1336 aa21.47■■□□□ 1.03
CHKA-201ENST00000265689 MTHFSDQ2M296 383 aaKnown RBP21.47■■□□□ 1.03
CHKA-201ENST00000265689 ZBTB40Q9NUA8 1239 aa21.46■■□□□ 1.03
CHKA-201ENST00000265689 KRT28Q7Z3Y7 464 aa21.46■■□□□ 1.03
CHKA-201ENST00000265689 KDRP35968 1356 aa21.45■■□□□ 1.03
CHKA-201ENST00000265689 CHL1O00533 1208 aa21.45■■□□□ 1.02
CHKA-201ENST00000265689 KRT24Q2M2I5 525 aa21.45■■□□□ 1.02
CHKA-201ENST00000265689 CABLES1Q8TDN4 633 aa21.45■■□□□ 1.02
CHKA-201ENST00000265689 ZBTB47Q9UFB7 747 aaPredicted RBP21.45■■□□□ 1.02
CHKA-201ENST00000265689 USHBP1Q8N6Y0 703 aa21.43■■□□□ 1.02
CHKA-201ENST00000265689 ARHGAP45Q92619 1136 aa21.43■■□□□ 1.02
CHKA-201ENST00000265689 USP54Q70EL1 1684 aa21.42■■□□□ 1.02
CHKA-201ENST00000265689 CRB1P82279 1406 aa21.42■■□□□ 1.02
CHKA-201ENST00000265689 HDAC1Q13547 482 aaPredicted RBP21.42■■□□□ 1.02
CHKA-201ENST00000265689 LTN1O94822 1766 aa21.41■■□□□ 1.02
CHKA-201ENST00000265689 KIF24Q5T7B8 1368 aa21.41■■□□□ 1.02
CHKA-201ENST00000265689 MSH6P52701 1360 aa21.41■■□□□ 1.02
CHKA-201ENST00000265689 MIS18AQ9NYP9 233 aa21.4■■□□□ 1.02
CHKA-201ENST00000265689 RTF1Q92541 710 aaKnown RBP21.39■■□□□ 1.02
CHKA-201ENST00000265689 ZC3H6P61129 1189 aaKnown RBP21.38■■□□□ 1.01
CHKA-201ENST00000265689 ZBTB7BO15156 539 aaPredicted RBP21.38■■□□□ 1.01
CHKA-201ENST00000265689 GAS2L2Q8NHY3 880 aa21.38■■□□□ 1.01
CHKA-201ENST00000265689 ABCC4O15439 1325 aa21.38■■□□□ 1.01
CHKA-201ENST00000265689 CADPS2Q86UW7 1296 aa21.37■■□□□ 1.01
CHKA-201ENST00000265689 TRPM3Q9HCF6 1732 aaPredicted RBP21.37■■□□□ 1.01
CHKA-201ENST00000265689 BRINP3Q76B58 766 aa21.36■■□□□ 1.01
CHKA-201ENST00000265689 BCL11AQ9H165 835 aa21.36■■□□□ 1.01
CHKA-201ENST00000265689 GCP02774 474 aa21.36■■□□□ 1.01
CHKA-201ENST00000265689 KIAA0232Q92628 1395 aa21.36■■□□□ 1.01
CHKA-201ENST00000265689 LRRC59Q96AG4 307 aaKnown RBP21.35■■□□□ 1.01
CHKA-201ENST00000265689 API5Q9BZZ5 524 aaKnown RBP21.35■■□□□ 1.01
CHKA-201ENST00000265689 RGPD2P0DJD1 1756 aa21.35■■□□□ 1.01
CHKA-201ENST00000265689 IP6K1Q92551 441 aa21.35■■□□□ 1.01
CHKA-201ENST00000265689 SMC5Q8IY18 1101 aa21.34■■□□□ 1.01
CHKA-201ENST00000265689 C1orf115Q9H7X2 142 aa21.34■■□□□ 1.01
CHKA-201ENST00000265689 TSPYL4Q9UJ04 414 aa21.34■■□□□ 1.01
CHKA-201ENST00000265689 RTL1A6NKG5 1358 aa21.34■■□□□ 1.01
CHKA-201ENST00000265689 NFAT5O94916 1531 aa21.34■■□□□ 1.01
CHKA-201ENST00000265689 AXIN2Q9Y2T1 843 aa21.34■■□□□ 1.01
CHKA-201ENST00000265689 SLAIN2Q9P270 581 aa21.33■■□□□ 1.01
CHKA-201ENST00000265689 SEC24BO95487 1268 aa21.32■■□□□ 1
CHKA-201ENST00000265689 RGPD5Q99666 1765 aa21.32■■□□□ 1
CHKA-201ENST00000265689 GNAT3A8MTJ3 354 aa21.31■■□□□ 1
CHKA-201ENST00000265689 HAP1P54257 671 aaPredicted RBP21.31■■□□□ 1
CHKA-201ENST00000265689 KCNH5Q8NCM2 988 aa21.31■■□□□ 1
CHKA-201ENST00000265689 HTATSF1O43719 755 aaKnown RBP21.3■■□□□ 1
CHKA-201ENST00000265689 CHRNA2Q15822 529 aa21.3■■□□□ 1
CHKA-201ENST00000265689 DDRGK1Q96HY6 314 aa21.3■■□□□ 1
CHKA-201ENST00000265689 CHMP4BQ9H444 224 aaKnown RBP21.3■■□□□ 1
CHKA-201ENST00000265689 MED1Q15648 1581 aaPredicted RBP21.3■■□□□ 1
CHKA-201ENST00000265689 NBPF6Q5VWK0 638 aa21.29■■□□□ 1
CHKA-201ENST00000265689 NBPF4Q96M43 638 aa21.29■■□□□ 1
CHKA-201ENST00000265689 VIRMAQ69YN4 1812 aaKnown RBP21.29■■□□□ 1
CHKA-201ENST00000265689 KIF1AQ12756 1690 aa21.29■■□□□ 1
CHKA-201ENST00000265689 IL17REQ8NFR9 667 aa21.28■■□□□ 1
CHKA-201ENST00000265689 DCCP43146 1447 aa21.28■■□□□ 1
CHKA-201ENST00000265689 ALS2Q96Q42 1657 aa21.28■■□□□ 1
CHKA-201ENST00000265689 USP19O94966 1318 aa21.28■■□□□ 1
CHKA-201ENST00000265689 MAP3K5Q99683 1374 aa21.28■■□□□ 1
CHKA-201ENST00000265689 RGS12O14924 1447 aa21.27■■□□□ 1
CHKA-201ENST00000265689 SLC4A2P04920 1241 aa21.27■■□□□ 1
CHKA-201ENST00000265689 NUCB1Q02818 461 aa21.26■□□□□ 0.99
CHKA-201ENST00000265689 SIRT2Q8IXJ6 389 aa21.26■□□□□ 0.99
CHKA-201ENST00000265689 INTS3Q68E01 1043 aaKnown RBP21.26■□□□□ 0.99
CHKA-201ENST00000265689 ARHGEF25Q86VW2 580 aa21.25■□□□□ 0.99
CHKA-201ENST00000265689 NPHP3Q7Z494 1330 aa21.25■□□□□ 0.99
CHKA-201ENST00000265689 PXDNQ92626 1479 aa21.25■□□□□ 0.99
CHKA-201ENST00000265689 LRRC37A3O60309 1634 aa21.24■□□□□ 0.99
CHKA-201ENST00000265689 LNPKQ9C0E8 428 aa21.24■□□□□ 0.99
CHKA-201ENST00000265689 SLC4A3P48751 1232 aa21.24■□□□□ 0.99
CHKA-201ENST00000265689 PTPRCP08575 1304 aa21.23■□□□□ 0.99
CHKA-201ENST00000265689 G2E3Q7L622 706 aa21.23■□□□□ 0.99
CHKA-201ENST00000265689 NCOA3Q9Y6Q9 1424 aa21.23■□□□□ 0.99
CHKA-201ENST00000265689 CHD1LQ86WJ1 897 aa21.22■□□□□ 0.99
CHKA-201ENST00000265689 NBR1Q14596 966 aa21.22■□□□□ 0.99
CHKA-201ENST00000265689 SLIT3O75094 1523 aa21.21■□□□□ 0.99
CHKA-201ENST00000265689 TAF7Q15545 349 aaPredicted RBP21.21■□□□□ 0.99
CHKA-201ENST00000265689 SPATA31A3Q5VYP0 1347 aa21.21■□□□□ 0.99
CHKA-201ENST00000265689 ANKRD45Q5TZF3 282 aa21.21■□□□□ 0.99
CHKA-201ENST00000265689 GCC1Q96CN9 775 aa21.2■□□□□ 0.98
CHKA-201ENST00000265689 ANKRD24Q8TF21 1146 aa21.2■□□□□ 0.98
CHKA-201ENST00000265689 TNS3Q68CZ2 1445 aa21.19■□□□□ 0.98
CHKA-201ENST00000265689 NECTIN2Q92692 538 aa21.19■□□□□ 0.98
CHKA-201ENST00000265689 PHRF1Q9P1Y6 1649 aaKnown RBP21.19■□□□□ 0.98
CHKA-201ENST00000265689 LGR6Q9HBX8 967 aa21.18■□□□□ 0.98
CHKA-201ENST00000265689 F6X3S4 739 aa21.18■□□□□ 0.98
CHKA-201ENST00000265689 STK31Q9BXU1 1019 aa21.17■□□□□ 0.98
CHKA-201ENST00000265689 SLC4A10Q6U841 1118 aa21.16■□□□□ 0.98
CHKA-201ENST00000265689 MEIS3Q99687 375 aa21.16■□□□□ 0.98
CHKA-201ENST00000265689 CCDC30Q5VVM6 783 aa21.16■□□□□ 0.98
CHKA-201ENST00000265689 BABAM1Q9NWV8 329 aa21.16■□□□□ 0.98
CHKA-201ENST00000265689 DAXXQ9UER7 740 aaPredicted RBP21.16■□□□□ 0.98
CHKA-201ENST00000265689 CEMIPQ8WUJ3 1361 aa21.15■□□□□ 0.98
CHKA-201ENST00000265689 ZNF530Q6P9A1 599 aaPredicted RBP21.15■□□□□ 0.98
CHKA-201ENST00000265689 PLEKHO1Q53GL0 409 aaPredicted RBP21.14■□□□□ 0.97
CHKA-201ENST00000265689 UPF2Q9HAU5 1272 aaKnown RBP21.14■□□□□ 0.97
CHKA-201ENST00000265689 ATP10DQ9P241 1426 aa21.14■□□□□ 0.97
CHKA-201ENST00000265689 ANKRD44Q8N8A2 993 aa21.13■□□□□ 0.97
CHKA-201ENST00000265689 PIP4K2BP78356 416 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms