RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 LRRFIP2Q9Y608 721 aaKnown RBP19.64■□□□□ 0.73
PDZRN3-201ENST00000263666 CWC27Q6UX04 472 aaKnown RBP19.64■□□□□ 0.73
PDZRN3-201ENST00000263666 EIF4A2Q14240 407 aaKnown RBP19.63■□□□□ 0.73
PDZRN3-201ENST00000263666 FBXW7Q969H0 707 aa19.63■□□□□ 0.73
PDZRN3-201ENST00000263666 CCDC173Q0VFZ6 552 aa19.62■□□□□ 0.73
PDZRN3-201ENST00000263666 RAB3GAP1Q15042 981 aa19.62■□□□□ 0.73
PDZRN3-201ENST00000263666 TRPM2O94759 1503 aa19.62■□□□□ 0.73
PDZRN3-201ENST00000263666 GSPT1P15170 499 aaKnown RBP19.62■□□□□ 0.73
PDZRN3-201ENST00000263666 SIL1Q9H173 461 aa19.62■□□□□ 0.73
PDZRN3-201ENST00000263666 CLASP1Q7Z460 1538 aa19.62■□□□□ 0.73
PDZRN3-201ENST00000263666 SRGAP3O43295 1099 aa19.62■□□□□ 0.73
PDZRN3-201ENST00000263666 SMC3Q9UQE7 1217 aa19.62■□□□□ 0.73
PDZRN3-201ENST00000263666 IQGAP3Q86VI3 1631 aa19.61■□□□□ 0.73
PDZRN3-201ENST00000263666 HSP90B1P14625 803 aaKnown RBP19.61■□□□□ 0.73
PDZRN3-201ENST00000263666 ABCC1P33527 1531 aa19.61■□□□□ 0.73
PDZRN3-201ENST00000263666 RBM25P49756 843 aaKnown RBP19.6■□□□□ 0.73
PDZRN3-201ENST00000263666 CCDC30Q5VVM6 783 aa19.6■□□□□ 0.73
PDZRN3-201ENST00000263666 SIRT2Q8IXJ6 389 aa19.6■□□□□ 0.73
PDZRN3-201ENST00000263666 GNAI3P08754 354 aa19.6■□□□□ 0.73
PDZRN3-201ENST00000263666 MX1P20591 662 aa19.59■□□□□ 0.73
PDZRN3-201ENST00000263666 IFIT2P09913 472 aaKnown RBP19.59■□□□□ 0.73
PDZRN3-201ENST00000263666 CEP85Q6P2H3 762 aa19.59■□□□□ 0.73
PDZRN3-201ENST00000263666 SPG7Q9UQ90 795 aa19.59■□□□□ 0.73
PDZRN3-201ENST00000263666 RIMS2Q9UQ26 1411 aa19.59■□□□□ 0.73
PDZRN3-201ENST00000263666 FERMT3Q86UX7 667 aa19.59■□□□□ 0.73
PDZRN3-201ENST00000263666 SNX21Q969T3 373 aa19.59■□□□□ 0.73
PDZRN3-201ENST00000263666 ACEP12821 1306 aa19.59■□□□□ 0.73
PDZRN3-201ENST00000263666 PRIM1P49642 420 aaKnown RBP19.58■□□□□ 0.73
PDZRN3-201ENST00000263666 ANKRD44Q8N8A2 993 aa19.58■□□□□ 0.73
PDZRN3-201ENST00000263666 IL13P35225 146 aa19.58■□□□□ 0.72
PDZRN3-201ENST00000263666 ZSCAN23Q3MJ62 389 aa19.58■□□□□ 0.72
PDZRN3-201ENST00000263666 SPC24Q8NBT2 197 aa19.58■□□□□ 0.72
PDZRN3-201ENST00000263666 DCTPP1Q9H773 170 aa19.58■□□□□ 0.72
PDZRN3-201ENST00000263666 CCT4P50991 539 aaKnown RBP19.57■□□□□ 0.72
PDZRN3-201ENST00000263666 EVA1CP58658 441 aa19.57■□□□□ 0.72
PDZRN3-201ENST00000263666 MADDQ8WXG6 1647 aa19.57■□□□□ 0.72
PDZRN3-201ENST00000263666 STK3Q13188 491 aa19.57■□□□□ 0.72
PDZRN3-201ENST00000263666 YTHDC2Q9H6S0 1430 aaKnown RBP19.56■□□□□ 0.72
PDZRN3-201ENST00000263666 CLCN1P35523 988 aa19.56■□□□□ 0.72
PDZRN3-201ENST00000263666 FLIIQ13045 1269 aa19.56■□□□□ 0.72
PDZRN3-201ENST00000263666 PPIP5K1Q6PFW1 1433 aa19.56■□□□□ 0.72
PDZRN3-201ENST00000263666 PDE1AP54750 535 aa19.56■□□□□ 0.72
PDZRN3-201ENST00000263666 TMX3Q96JJ7 454 aa19.56■□□□□ 0.72
PDZRN3-201ENST00000263666 NLRP2Q9NX02 1062 aa19.56■□□□□ 0.72
PDZRN3-201ENST00000263666 UNC13BO14795 1591 aa19.56■□□□□ 0.72
PDZRN3-201ENST00000263666 TSPOAP1O95153 1857 aa19.56■□□□□ 0.72
PDZRN3-201ENST00000263666 ZSCAN30Q86W11 494 aa19.56■□□□□ 0.72
PDZRN3-201ENST00000263666 ARHGAP45Q92619 1136 aa19.55■□□□□ 0.72
PDZRN3-201ENST00000263666 ZNF830Q96NB3 372 aaPredicted RBP19.55■□□□□ 0.72
PDZRN3-201ENST00000263666 PHF23Q9BUL5 403 aaPredicted RBP19.55■□□□□ 0.72
PDZRN3-201ENST00000263666 USP26Q9BXU7 913 aa19.55■□□□□ 0.72
PDZRN3-201ENST00000263666 MSH6P52701 1360 aa19.55■□□□□ 0.72
PDZRN3-201ENST00000263666 MTHFSDQ2M296 383 aaKnown RBP19.55■□□□□ 0.72
PDZRN3-201ENST00000263666 KLHL40Q2TBA0 621 aa19.55■□□□□ 0.72
PDZRN3-201ENST00000263666 C1orf141Q5JVX7 400 aa19.55■□□□□ 0.72
PDZRN3-201ENST00000263666 E9PCH4 1651 aa19.54■□□□□ 0.72
PDZRN3-201ENST00000263666 PPFIA3O75145 1194 aa19.54■□□□□ 0.72
PDZRN3-201ENST00000263666 CPA1P15085 419 aa19.54■□□□□ 0.72
PDZRN3-201ENST00000263666 ZRSR1Q15695 479 aaKnown RBP19.54■□□□□ 0.72
PDZRN3-201ENST00000263666 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.54■□□□□ 0.72
PDZRN3-201ENST00000263666 CEBPZQ03701 1054 aaKnown RBP19.54■□□□□ 0.72
PDZRN3-201ENST00000263666 TSPY26PQ9H489 355 aa19.54■□□□□ 0.72
PDZRN3-201ENST00000263666 CWC22Q9HCG8 908 aaKnown RBP19.53■□□□□ 0.72
PDZRN3-201ENST00000263666 TCEANC2Q96MN5 208 aa19.53■□□□□ 0.72
PDZRN3-201ENST00000263666 PHF14O94880 888 aa19.52■□□□□ 0.72
PDZRN3-201ENST00000263666 TAF7Q15545 349 aaPredicted RBP19.52■□□□□ 0.72
PDZRN3-201ENST00000263666 GPATCH3Q96I76 525 aa19.52■□□□□ 0.72
PDZRN3-201ENST00000263666 SRCIN1Q9C0H9 1055 aa19.52■□□□□ 0.72
PDZRN3-201ENST00000263666 SBNO2Q9Y2G9 1366 aa19.52■□□□□ 0.72
PDZRN3-201ENST00000263666 ZFYVE16Q7Z3T8 1539 aa19.52■□□□□ 0.72
PDZRN3-201ENST00000263666 CCDC83Q8IWF9 413 aa19.52■□□□□ 0.71
PDZRN3-201ENST00000263666 JARID2Q92833 1246 aaPredicted RBP19.52■□□□□ 0.71
PDZRN3-201ENST00000263666 HSPA2P54652 639 aa19.51■□□□□ 0.71
PDZRN3-201ENST00000263666 CHAF1AQ13111 956 aaPredicted RBP19.51■□□□□ 0.71
PDZRN3-201ENST00000263666 CLASRPQ8N2M8 674 aaKnown RBP19.51■□□□□ 0.71
PDZRN3-201ENST00000263666 KDM4AO75164 1064 aa19.51■□□□□ 0.71
PDZRN3-201ENST00000263666 AEBP2Q6ZN18 517 aaPredicted RBP19.5■□□□□ 0.71
PDZRN3-201ENST00000263666 RBSNQ9H1K0 784 aa19.5■□□□□ 0.71
PDZRN3-201ENST00000263666 USP25Q9UHP3 1055 aa19.5■□□□□ 0.71
PDZRN3-201ENST00000263666 ZKSCAN1P17029 563 aaPredicted RBP19.5■□□□□ 0.71
PDZRN3-201ENST00000263666 JAKMIP1Q96N16 626 aaKnown RBP19.5■□□□□ 0.71
PDZRN3-201ENST00000263666 MLH3Q9UHC1 1453 aa19.5■□□□□ 0.71
PDZRN3-201ENST00000263666 MBD3O95983 291 aa19.5■□□□□ 0.71
PDZRN3-201ENST00000263666 CASTP20810 708 aaKnown RBP19.5■□□□□ 0.71
PDZRN3-201ENST00000263666 TTC21BQ7Z4L5 1316 aa19.5■□□□□ 0.71
PDZRN3-201ENST00000263666 MPRIPQ6WCQ1 1025 aa19.49■□□□□ 0.71
PDZRN3-201ENST00000263666 CNTROBQ8N137 903 aa19.49■□□□□ 0.71
PDZRN3-201ENST00000263666 ISY1Q9ULR0 285 aaKnown RBP19.49■□□□□ 0.71
PDZRN3-201ENST00000263666 UQCRHLA0A096LP55 91 aa19.49■□□□□ 0.71
PDZRN3-201ENST00000263666 PNMA6EA0A0J9YXQ4 647 aa19.49■□□□□ 0.71
PDZRN3-201ENST00000263666 UQCRHP07919 91 aa19.49■□□□□ 0.71
PDZRN3-201ENST00000263666 MYL6BP14649 208 aa19.49■□□□□ 0.71
PDZRN3-201ENST00000263666 PPP1R42Q7Z4L9 355 aa19.49■□□□□ 0.71
PDZRN3-201ENST00000263666 ZNF592Q92610 1267 aa19.49■□□□□ 0.71
PDZRN3-201ENST00000263666 GNAT3A8MTJ3 354 aa19.48■□□□□ 0.71
PDZRN3-201ENST00000263666 ZC3H6P61129 1189 aaKnown RBP19.48■□□□□ 0.71
PDZRN3-201ENST00000263666 G3BP1Q13283 466 aaKnown RBP eCLIP19.48■□□□□ 0.71
PDZRN3-201ENST00000263666 BICD2Q8TD16 824 aa19.48■□□□□ 0.71
PDZRN3-201ENST00000263666 RAPGEF4Q8WZA2 1011 aa19.48■□□□□ 0.71
PDZRN3-201ENST00000263666 FSD1Q9BTV5 496 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms