RNA–Protein interactions for RNA: ENST00000263665.6

CNTN3-201, Transcript of contactin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTN3, Length 4,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3-201ENST00000263665 ZKSCAN2Q63HK3 967 aa8.03□□□□□ -1.12
CNTN3-201ENST00000263665 CLIP2Q9UDT6 1046 aa8.03□□□□□ -1.12
CNTN3-201ENST00000263665 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.03□□□□□ -1.12
CNTN3-201ENST00000263665 ZSCAN12O43309 604 aa8.03□□□□□ -1.12
CNTN3-201ENST00000263665 LUC7L3O95232 432 aaKnown RBP8.03□□□□□ -1.12
CNTN3-201ENST00000263665 GORABQ5T7V8 394 aa8.03□□□□□ -1.12
CNTN3-201ENST00000263665 TRIM6Q9C030 488 aaPredicted RBP8.03□□□□□ -1.12
CNTN3-201ENST00000263665 BCL2L12Q9HB09 334 aa8.03□□□□□ -1.12
CNTN3-201ENST00000263665 RRP15Q9Y3B9 282 aaKnown RBP8.03□□□□□ -1.12
CNTN3-201ENST00000263665 WHAMMP3Q1A5X7 153 aa8.03□□□□□ -1.12
CNTN3-201ENST00000263665 OTUD6BQ8N6M0 293 aa8.03□□□□□ -1.12
CNTN3-201ENST00000263665 IQCGQ9H095 443 aaKnown RBP8.03□□□□□ -1.12
CNTN3-201ENST00000263665 FEZ2Q9UHY8 353 aaPredicted RBP8.03□□□□□ -1.12
CNTN3-201ENST00000263665 NPHP1O15259 732 aa8.03□□□□□ -1.12
CNTN3-201ENST00000263665 CAVIN2O95810 425 aa8.03□□□□□ -1.12
CNTN3-201ENST00000263665 ZSCAN20P17040 1043 aaPredicted RBP8.03□□□□□ -1.12
CNTN3-201ENST00000263665 GSDMDP57764 484 aa8.03□□□□□ -1.12
CNTN3-201ENST00000263665 SETDB1Q15047 1291 aa8.03□□□□□ -1.12
CNTN3-201ENST00000263665 FAM184BQ9ULE4 1060 aa8.03□□□□□ -1.12
CNTN3-201ENST00000263665 NCAPD3P42695 1498 aa8.02□□□□□ -1.12
CNTN3-201ENST00000263665 CCDC65Q8IXS2 484 aa8.02□□□□□ -1.13
CNTN3-201ENST00000263665 ARMC2Q8NEN0 867 aa8.02□□□□□ -1.13
CNTN3-201ENST00000263665 CHCHD3Q9NX63 227 aaKnown RBP8.02□□□□□ -1.13
CNTN3-201ENST00000263665 INTS3Q68E01 1043 aaKnown RBP8.02□□□□□ -1.13
CNTN3-201ENST00000263665 LMNTD2Q8IXW0 634 aa8.02□□□□□ -1.13
CNTN3-201ENST00000263665 DDX12PQ92771 950 aa8.02□□□□□ -1.13
CNTN3-201ENST00000263665 UIMC1Q96RL1 719 aa8.02□□□□□ -1.13
CNTN3-201ENST00000263665 TBC1D2Q9BYX2 928 aa8.02□□□□□ -1.13
CNTN3-201ENST00000263665 CDC45O75419 566 aa8.02□□□□□ -1.13
CNTN3-201ENST00000263665 CHRM1P11229 460 aaPredicted RBP8.02□□□□□ -1.13
CNTN3-201ENST00000263665 INPP5BP32019 993 aa8.02□□□□□ -1.13
CNTN3-201ENST00000263665 BRPF1P55201 1214 aaPredicted RBP8.02□□□□□ -1.13
CNTN3-201ENST00000263665 RWDD2BP57060 319 aa8.02□□□□□ -1.13
CNTN3-201ENST00000263665 CCDC183Q5T5S1 534 aa8.02□□□□□ -1.13
CNTN3-201ENST00000263665 RNF187Q5TA31 235 aaPredicted RBP8.02□□□□□ -1.13
CNTN3-201ENST00000263665 SPC24Q8NBT2 197 aa8.02□□□□□ -1.13
CNTN3-201ENST00000263665 MRFAP1L1Q96HT8 127 aa8.02□□□□□ -1.13
CNTN3-201ENST00000263665 DHX16O60231 1041 aaKnown RBP8.02□□□□□ -1.13
CNTN3-201ENST00000263665 TERF2Q15554 542 aa8.02□□□□□ -1.13
CNTN3-201ENST00000263665 WHAMMQ8TF30 809 aa8.02□□□□□ -1.13
CNTN3-201ENST00000263665 FGD6Q6ZV73 1430 aa8.01□□□□□ -1.13
CNTN3-201ENST00000263665 MAPKBP1O60336 1514 aa8.01□□□□□ -1.13
CNTN3-201ENST00000263665 A0A087WUV0 522 aaPredicted RBP8.01□□□□□ -1.13
CNTN3-201ENST00000263665 TSPY4P0CV99 314 aa8.01□□□□□ -1.13
CNTN3-201ENST00000263665 TSPY10P0CW01 314 aa8.01□□□□□ -1.13
CNTN3-201ENST00000263665 CEP57Q86XR8 500 aa8.01□□□□□ -1.13
CNTN3-201ENST00000263665 TNPO1Q92973 898 aaKnown RBP8.01□□□□□ -1.13
CNTN3-201ENST00000263665 CHIC2Q9UKJ5 165 aa8.01□□□□□ -1.13
CNTN3-201ENST00000263665 TIAM1Q13009 1591 aa8.01□□□□□ -1.13
CNTN3-201ENST00000263665 GIGYF2Q6Y7W6 1299 aaKnown RBP8.01□□□□□ -1.13
CNTN3-201ENST00000263665 CTCFLQ8NI51 663 aaPredicted RBP8.01□□□□□ -1.13
CNTN3-201ENST00000263665 ATP2B1P20020 1258 aa8.01□□□□□ -1.13
CNTN3-201ENST00000263665 ZNF445P59923 1031 aa8.01□□□□□ -1.13
CNTN3-201ENST00000263665 ZSCAN23Q3MJ62 389 aa8.01□□□□□ -1.13
CNTN3-201ENST00000263665 ZCRB1Q8TBF4 217 aaKnown RBP8.01□□□□□ -1.13
CNTN3-201ENST00000263665 KIF2CQ99661 725 aa8.01□□□□□ -1.13
CNTN3-201ENST00000263665 POLA1P09884 1462 aaPredicted RBP8.01□□□□□ -1.13
CNTN3-201ENST00000263665 RAD50Q92878 1312 aa8.01□□□□□ -1.13
CNTN3-201ENST00000263665 CBFA2T2O43439 604 aa8□□□□□ -1.13
CNTN3-201ENST00000263665 KIF5CO60282 957 aa8□□□□□ -1.13
CNTN3-201ENST00000263665 PPFIA3O75145 1194 aa8□□□□□ -1.13
CNTN3-201ENST00000263665 DESP17661 470 aa8□□□□□ -1.13
CNTN3-201ENST00000263665 POLD1P28340 1107 aa8□□□□□ -1.13
CNTN3-201ENST00000263665 MMP14P50281 582 aa8□□□□□ -1.13
CNTN3-201ENST00000263665 SLMAPQ14BN4 828 aa8□□□□□ -1.13
CNTN3-201ENST00000263665 CEP89Q96ST8 783 aa8□□□□□ -1.13
CNTN3-201ENST00000263665 SATB2Q9UPW6 733 aa8□□□□□ -1.13
CNTN3-201ENST00000263665 SYCE3A1L190 88 aa8□□□□□ -1.13
CNTN3-201ENST00000263665 MSL1Q68DK7 614 aa8□□□□□ -1.13
CNTN3-201ENST00000263665 NBPF10Q6P3W6 841 aaKnown RBP8□□□□□ -1.13
CNTN3-201ENST00000263665 VCXQ9H320 206 aa8□□□□□ -1.13
CNTN3-201ENST00000263665 WIZO95785 1651 aa8□□□□□ -1.13
CNTN3-201ENST00000263665 KCNA4P22459 653 aa8□□□□□ -1.13
CNTN3-201ENST00000263665 RIPK4P57078 832 aa8□□□□□ -1.13
CNTN3-201ENST00000263665 C8orf34Q49A92 452 aa8□□□□□ -1.13
CNTN3-201ENST00000263665 CCDC40Q4G0X9 1142 aa8□□□□□ -1.13
CNTN3-201ENST00000263665 ZNF365Q70YC5 407 aa8□□□□□ -1.13
CNTN3-201ENST00000263665 SMC5Q8IY18 1101 aa8□□□□□ -1.13
CNTN3-201ENST00000263665 C16orf45Q96MC5 204 aaPredicted RBP8□□□□□ -1.13
CNTN3-201ENST00000263665 NLRP5P59047 1200 aa7.99□□□□□ -1.13
CNTN3-201ENST00000263665 DYNC1I2Q13409 638 aaKnown RBP7.99□□□□□ -1.13
CNTN3-201ENST00000263665 NOL8Q76FK4 1167 aaKnown RBP7.99□□□□□ -1.13
CNTN3-201ENST00000263665 CCDC114Q96M63 670 aa7.99□□□□□ -1.13
CNTN3-201ENST00000263665 WDR33Q9C0J8 1336 aaKnown RBP7.99□□□□□ -1.13
CNTN3-201ENST00000263665 MAFGO15525 162 aa7.99□□□□□ -1.13
CNTN3-201ENST00000263665 PLIN1O60240 522 aa7.99□□□□□ -1.13
CNTN3-201ENST00000263665 ADCY5O95622 1261 aa7.99□□□□□ -1.13
CNTN3-201ENST00000263665 CCDC186Q7Z3E2 898 aa7.99□□□□□ -1.13
CNTN3-201ENST00000263665 ITPRIPQ8IWB1 547 aa7.99□□□□□ -1.13
CNTN3-201ENST00000263665 FRMD4BQ9Y2L6 1034 aa7.99□□□□□ -1.13
CNTN3-201ENST00000263665 MYO1CO00159 1063 aa7.99□□□□□ -1.13
CNTN3-201ENST00000263665 ZFYP08048 801 aaPredicted RBP7.99□□□□□ -1.13
CNTN3-201ENST00000263665 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.99□□□□□ -1.13
CNTN3-201ENST00000263665 FYCO1Q9BQS8 1478 aa7.99□□□□□ -1.13
CNTN3-201ENST00000263665 RIOK3O14730 519 aaKnown RBP7.99□□□□□ -1.13
CNTN3-201ENST00000263665 IFFO1Q0D2I5 559 aa7.99□□□□□ -1.13
CNTN3-201ENST00000263665 SMC1AQ14683 1233 aaKnown RBP7.99□□□□□ -1.13
CNTN3-201ENST00000263665 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.99□□□□□ -1.13
CNTN3-201ENST00000263665 CECR2Q9BXF3 1484 aa7.98□□□□□ -1.13
CNTN3-201ENST00000263665 CCDC121Q6ZUS5 278 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms