RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 NOM1Q5C9Z4 860 aaKnown RBP10.1□□□□□ -0.79
LDB3-201ENST00000263066 SULT6B1Q6IMI4 303 aa10.1□□□□□ -0.79
LDB3-201ENST00000263066 LMTK3Q96Q04 1460 aa10.1□□□□□ -0.79
LDB3-201ENST00000263066 RNF17Q9BXT8 1623 aaKnown RBP10.1□□□□□ -0.79
LDB3-201ENST00000263066 THUMPD2Q9BTF0 503 aaKnown RBP10.1□□□□□ -0.79
LDB3-201ENST00000263066 BCL2L12Q9HB09 334 aa10.1□□□□□ -0.79
LDB3-201ENST00000263066 OGFRQ9NZT2 677 aa10.1□□□□□ -0.79
LDB3-201ENST00000263066 RNF123Q5XPI4 1314 aa10.1□□□□□ -0.79
LDB3-201ENST00000263066 ABCA6Q8N139 1617 aa10.1□□□□□ -0.79
LDB3-201ENST00000263066 GPS2Q13227 327 aa10.1□□□□□ -0.79
LDB3-201ENST00000263066 EP400NLQ6ZTU2 488 aa10.1□□□□□ -0.79
LDB3-201ENST00000263066 C17orf53Q8N3J3 647 aaPredicted RBP10.1□□□□□ -0.79
LDB3-201ENST00000263066 IFT57Q9NWB7 429 aa10.1□□□□□ -0.79
LDB3-201ENST00000263066 ADAMTS8Q9UP79 889 aa10.1□□□□□ -0.79
LDB3-201ENST00000263066 UHRF1BP1Q6BDS2 1440 aa10.09□□□□□ -0.79
LDB3-201ENST00000263066 SYCE3A1L190 88 aa10.09□□□□□ -0.79
LDB3-201ENST00000263066 DRC1Q96MC2 740 aa10.09□□□□□ -0.79
LDB3-201ENST00000263066 RASSF4Q9H2L5 321 aa10.09□□□□□ -0.79
LDB3-201ENST00000263066 CEP152O94986 1710 aa10.09□□□□□ -0.79
LDB3-201ENST00000263066 HTATSF1O43719 755 aaKnown RBP10.09□□□□□ -0.79
LDB3-201ENST00000263066 ARAP3Q8WWN8 1544 aa10.09□□□□□ -0.79
LDB3-201ENST00000263066 ZNF500O60304 480 aaPredicted RBP10.09□□□□□ -0.79
LDB3-201ENST00000263066 NOLC1Q14978 699 aaKnown RBP eCLIP10.09□□□□□ -0.79
LDB3-201ENST00000263066 SLC4A10Q6U841 1118 aa10.09□□□□□ -0.79
LDB3-201ENST00000263066 RAPGEF4Q8WZA2 1011 aa10.09□□□□□ -0.79
LDB3-201ENST00000263066 MYCBPQ99417 103 aaPredicted RBP10.09□□□□□ -0.79
LDB3-201ENST00000263066 DCTN1Q14203 1278 aa10.08□□□□□ -0.8
LDB3-201ENST00000263066 MIS18AQ9NYP9 233 aa10.08□□□□□ -0.8
LDB3-201ENST00000263066 GOLIM4O00461 696 aa10.08□□□□□ -0.8
LDB3-201ENST00000263066 KRT222Q8N1A0 295 aa10.08□□□□□ -0.8
LDB3-201ENST00000263066 SYAP1Q96A49 352 aaPredicted RBP10.08□□□□□ -0.8
LDB3-201ENST00000263066 PPP1R9BQ96SB3 815 aa10.08□□□□□ -0.8
LDB3-201ENST00000263066 DMRT2Q9Y5R5 561 aa10.08□□□□□ -0.8
LDB3-201ENST00000263066 DISP3Q9P2K9 1392 aa10.08□□□□□ -0.8
LDB3-201ENST00000263066 HS1BP3Q53T59 392 aa10.08□□□□□ -0.8
LDB3-201ENST00000263066 SPC24Q8NBT2 197 aa10.08□□□□□ -0.8
LDB3-201ENST00000263066 FEZ1Q99689 392 aa10.08□□□□□ -0.8
LDB3-201ENST00000263066 CWC15Q9P013 229 aaKnown RBP10.08□□□□□ -0.8
LDB3-201ENST00000263066 PLEKHH1Q9ULM0 1364 aa10.08□□□□□ -0.8
LDB3-201ENST00000263066 POLR3GO15318 223 aaPredicted RBP10.08□□□□□ -0.8
LDB3-201ENST00000263066 CADPS2Q86UW7 1296 aa10.08□□□□□ -0.8
LDB3-201ENST00000263066 TTC12Q9H892 705 aaPredicted RBP10.08□□□□□ -0.8
LDB3-201ENST00000263066 TOM1O60784 492 aa10.07□□□□□ -0.8
LDB3-201ENST00000263066 CALRP27797 417 aaKnown RBP10.07□□□□□ -0.8
LDB3-201ENST00000263066 PRKAR2BP31323 418 aa10.07□□□□□ -0.8
LDB3-201ENST00000263066 GABPB1Q06547 395 aaPredicted RBP10.07□□□□□ -0.8
LDB3-201ENST00000263066 SSFA2P28290 1259 aa10.07□□□□□ -0.8
LDB3-201ENST00000263066 SKIDA1Q1XH10 827 aa10.07□□□□□ -0.8
LDB3-201ENST00000263066 MYO5BQ9ULV0 1848 aa10.07□□□□□ -0.8
LDB3-201ENST00000263066 KDM4FA0A1W2PPD8 638 aa10.07□□□□□ -0.8
LDB3-201ENST00000263066 TEFQ10587 303 aa10.07□□□□□ -0.8
LDB3-201ENST00000263066 CLTCL1P53675 1640 aa10.06□□□□□ -0.8
LDB3-201ENST00000263066 PRIM1P49642 420 aaKnown RBP10.06□□□□□ -0.8
LDB3-201ENST00000263066 RWDD1Q9H446 243 aaPredicted RBP10.06□□□□□ -0.8
LDB3-201ENST00000263066 RBM27Q9P2N5 1060 aaKnown RBP10.06□□□□□ -0.8
LDB3-201ENST00000263066 KCNG1Q9UIX4 513 aa10.06□□□□□ -0.8
LDB3-201ENST00000263066 MYOM1P52179 1685 aa10.06□□□□□ -0.8
LDB3-201ENST00000263066 CCDC112Q8NEF3 446 aa10.06□□□□□ -0.8
LDB3-201ENST00000263066 TBC1D32Q96NH3 1257 aa10.06□□□□□ -0.8
LDB3-201ENST00000263066 NOL10Q9BSC4 688 aaKnown RBP10.06□□□□□ -0.8
LDB3-201ENST00000263066 ZBTB12Q9Y330 459 aaPredicted RBP10.06□□□□□ -0.8
LDB3-201ENST00000263066 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.06□□□□□ -0.8
LDB3-201ENST00000263066 SPHKAPQ2M3C7 1700 aa10.06□□□□□ -0.8
LDB3-201ENST00000263066 HSP90AB2PQ58FF8 381 aa10.06□□□□□ -0.8
LDB3-201ENST00000263066 C1orf141Q5JVX7 400 aa10.06□□□□□ -0.8
LDB3-201ENST00000263066 C19orf44Q9H6X5 657 aa10.06□□□□□ -0.8
LDB3-201ENST00000263066 PPP2R1AP30153 589 aa10.05□□□□□ -0.8
LDB3-201ENST00000263066 GOLGA2Q08379 1002 aa10.05□□□□□ -0.8
LDB3-201ENST00000263066 CFAP44Q96MT7 982 aa10.05□□□□□ -0.8
LDB3-201ENST00000263066 RBSNQ9H1K0 784 aa10.05□□□□□ -0.8
LDB3-201ENST00000263066 TTLL5Q6EMB2 1281 aa10.05□□□□□ -0.8
LDB3-201ENST00000263066 LRRC59Q96AG4 307 aaKnown RBP10.05□□□□□ -0.8
LDB3-201ENST00000263066 ANTXR1Q9H6X2 564 aa10.05□□□□□ -0.8
LDB3-201ENST00000263066 METP08581 1390 aa10.05□□□□□ -0.8
LDB3-201ENST00000263066 MYBBP1AQ9BQG0 1328 aaKnown RBP10.05□□□□□ -0.8
LDB3-201ENST00000263066 ZSCAN23Q3MJ62 389 aa10.05□□□□□ -0.8
LDB3-201ENST00000263066 WWC3Q9ULE0 1092 aa10.05□□□□□ -0.8
LDB3-201ENST00000263066 AIMP1Q12904 312 aaKnown RBP10.04□□□□□ -0.8
LDB3-201ENST00000263066 FAM182BQ5T319 152 aa10.04□□□□□ -0.8
LDB3-201ENST00000263066 PLCD4Q9BRC7 762 aa10.04□□□□□ -0.8
LDB3-201ENST00000263066 RBM42Q9BTD8 480 aaKnown RBP10.04□□□□□ -0.8
LDB3-201ENST00000263066 PPP1R1BQ9UD71 204 aaPredicted RBP10.04□□□□□ -0.8
LDB3-201ENST00000263066 NSD3Q9BZ95 1437 aa10.04□□□□□ -0.8
LDB3-201ENST00000263066 MSH6P52701 1360 aa10.04□□□□□ -0.8
LDB3-201ENST00000263066 PTCD1O75127 700 aaKnown RBP10.04□□□□□ -0.8
LDB3-201ENST00000263066 TMED8Q6PL24 325 aaPredicted RBP10.04□□□□□ -0.8
LDB3-201ENST00000263066 PANK1Q8TE04 598 aa10.04□□□□□ -0.8
LDB3-201ENST00000263066 TSPY26PQ9H489 355 aa10.04□□□□□ -0.8
LDB3-201ENST00000263066 SMC4Q9NTJ3 1288 aa10.04□□□□□ -0.8
LDB3-201ENST00000263066 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.04□□□□□ -0.8
LDB3-201ENST00000263066 V9GYY5 206 aaPredicted RBP10.04□□□□□ -0.8
LDB3-201ENST00000263066 KLHL40Q2TBA0 621 aa10.03□□□□□ -0.8
LDB3-201ENST00000263066 SLAIN2Q9P270 581 aa10.03□□□□□ -0.8
LDB3-201ENST00000263066 USP25Q9UHP3 1055 aa10.03□□□□□ -0.8
LDB3-201ENST00000263066 TMEM2Q9UHN6 1383 aa10.03□□□□□ -0.8
LDB3-201ENST00000263066 RIOK3O14730 519 aaKnown RBP10.03□□□□□ -0.8
LDB3-201ENST00000263066 RNF216Q9NWF9 866 aaPredicted RBP10.03□□□□□ -0.8
LDB3-201ENST00000263066 TAOK2Q9UL54 1235 aa10.03□□□□□ -0.8
LDB3-201ENST00000263066 PRDM15P57071 1507 aaPredicted RBP10.03□□□□□ -0.8
LDB3-201ENST00000263066 C16orf45Q96MC5 204 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms