RNA–Protein interactions for RNA: ENST00000262043.7

PHF3-201, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHF3, Length 8,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-201ENST00000262043 TROQ12816 1431 aaPredicted RBP12.1□□□□□ -0.47
PHF3-201ENST00000262043 EPRSP07814 1512 aaKnown RBP12.1□□□□□ -0.47
PHF3-201ENST00000262043 SPATA32Q96LK8 384 aa12.1□□□□□ -0.47
PHF3-201ENST00000262043 IL1RAPL2Q9NP60 686 aa12.1□□□□□ -0.47
PHF3-201ENST00000262043 GRPEL1Q9HAV7 217 aa12.1□□□□□ -0.47
PHF3-201ENST00000262043 CASTP20810 708 aaKnown RBP12.1□□□□□ -0.47
PHF3-201ENST00000262043 CCDC184Q52MB2 194 aa12.09□□□□□ -0.47
PHF3-201ENST00000262043 XPCQ01831 940 aaPredicted RBP12.09□□□□□ -0.47
PHF3-201ENST00000262043 TMEM57Q8N5G2 664 aa12.09□□□□□ -0.47
PHF3-201ENST00000262043 CFAP45Q9UL16 551 aa12.09□□□□□ -0.47
PHF3-201ENST00000262043 GNAT3A8MTJ3 354 aa12.09□□□□□ -0.47
PHF3-201ENST00000262043 PIBF1Q8WXW3 757 aa12.09□□□□□ -0.47
PHF3-201ENST00000262043 IFT140Q96RY7 1462 aa12.09□□□□□ -0.47
PHF3-201ENST00000262043 SLC26A8Q96RN1 970 aa12.09□□□□□ -0.47
PHF3-201ENST00000262043 SLC52A1Q9NWF4 448 aa12.08□□□□□ -0.48
PHF3-201ENST00000262043 CDKL5O76039 1030 aa12.08□□□□□ -0.48
PHF3-201ENST00000262043 TMPOP42166 694 aaKnown RBP12.08□□□□□ -0.48
PHF3-201ENST00000262043 CCDC85AQ96PX6 553 aaPredicted RBP12.08□□□□□ -0.48
PHF3-201ENST00000262043 ARHGEF11O15085 1522 aa12.08□□□□□ -0.48
PHF3-201ENST00000262043 SOGA3Q5TF21 947 aa12.08□□□□□ -0.48
PHF3-201ENST00000262043 CCDC181Q5TID7 509 aa12.08□□□□□ -0.48
PHF3-201ENST00000262043 LEKR1Q6ZMV7 388 aa12.08□□□□□ -0.48
PHF3-201ENST00000262043 ERLIN2O94905 339 aa12.08□□□□□ -0.48
PHF3-201ENST00000262043 HMGN5P82970 282 aaKnown RBP12.07□□□□□ -0.48
PHF3-201ENST00000262043 UBAC1Q9BSL1 405 aa12.07□□□□□ -0.48
PHF3-201ENST00000262043 LUC7LQ9NQ29 371 aaKnown RBP12.07□□□□□ -0.48
PHF3-201ENST00000262043 GOLGA6L10A6NI86 522 aa12.07□□□□□ -0.48
PHF3-201ENST00000262043 NEFHP12036 1026 aa12.07□□□□□ -0.48
PHF3-201ENST00000262043 NOL7Q9UMY1 257 aaKnown RBP12.07□□□□□ -0.48
PHF3-201ENST00000262043 NUTM1Q86Y26 1132 aa12.07□□□□□ -0.48
PHF3-201ENST00000262043 LRP2BPQ9P2M1 347 aa12.07□□□□□ -0.48
PHF3-201ENST00000262043 ATAD2Q6PL18 1390 aa12.07□□□□□ -0.48
PHF3-201ENST00000262043 RAPGEF3O95398 923 aa12.07□□□□□ -0.48
PHF3-201ENST00000262043 NFE2L2Q16236 605 aa12.07□□□□□ -0.48
PHF3-201ENST00000262043 CCDC191Q8NCU4 936 aa12.07□□□□□ -0.48
PHF3-201ENST00000262043 POLA1P09884 1462 aaPredicted RBP12.06□□□□□ -0.48
PHF3-201ENST00000262043 CAMSAP2Q08AD1 1489 aa12.06□□□□□ -0.48
PHF3-201ENST00000262043 FCHSD2O94868 740 aa12.06□□□□□ -0.48
PHF3-201ENST00000262043 EXOC6BQ9Y2D4 811 aa12.06□□□□□ -0.48
PHF3-201ENST00000262043 PDCL3Q9H2J4 239 aa12.06□□□□□ -0.48
PHF3-201ENST00000262043 IL27Q8NEV9 243 aa12.06□□□□□ -0.48
PHF3-201ENST00000262043 CBFA2T2O43439 604 aa12.06□□□□□ -0.48
PHF3-201ENST00000262043 PAF1Q8N7H5 531 aa12.06□□□□□ -0.48
PHF3-201ENST00000262043 NKTRP30414 1462 aaKnown RBP12.06□□□□□ -0.48
PHF3-201ENST00000262043 ZSCAN29Q8IWY8 852 aaPredicted RBP12.06□□□□□ -0.48
PHF3-201ENST00000262043 NUP62CLQ9H1M0 184 aa12.05□□□□□ -0.48
PHF3-201ENST00000262043 CEP126Q9P2H0 1117 aa12.05□□□□□ -0.48
PHF3-201ENST00000262043 CTNNA3Q9UI47 895 aa12.05□□□□□ -0.48
PHF3-201ENST00000262043 MCM10Q7L590 875 aa12.05□□□□□ -0.48
PHF3-201ENST00000262043 CEP57L1Q8IYX8 460 aa12.05□□□□□ -0.48
PHF3-201ENST00000262043 DDX11Q96FC9 970 aa12.05□□□□□ -0.48
PHF3-201ENST00000262043 IDH1O75874 414 aaKnown RBP12.05□□□□□ -0.48
PHF3-201ENST00000262043 SEPT7Q16181 437 aaKnown RBP12.05□□□□□ -0.48
PHF3-201ENST00000262043 RAI14Q9P0K7 980 aa12.05□□□□□ -0.48
PHF3-201ENST00000262043 ANKRD30BQ9BXX2 1392 aa12.05□□□□□ -0.48
PHF3-201ENST00000262043 SLFN5Q08AF3 891 aa12.05□□□□□ -0.48
PHF3-201ENST00000262043 CENPHQ9H3R5 247 aa12.05□□□□□ -0.48
PHF3-201ENST00000262043 SEPT11Q9NVA2 429 aaKnown RBP12.05□□□□□ -0.48
PHF3-201ENST00000262043 CCDC141Q6ZP82 1450 aa12.05□□□□□ -0.48
PHF3-201ENST00000262043 KRT32Q14532 448 aa12.05□□□□□ -0.48
PHF3-201ENST00000262043 SSBP05455 408 aaKnown RBP eCLIP12.04□□□□□ -0.48
PHF3-201ENST00000262043 DHX8Q14562 1220 aaKnown RBP12.04□□□□□ -0.48
PHF3-201ENST00000262043 TSPYL1Q9H0U9 437 aa12.04□□□□□ -0.48
PHF3-201ENST00000262043 PRDM11Q9NQV5 511 aa12.04□□□□□ -0.48
PHF3-201ENST00000262043 BICDL1Q6ZP65 573 aa12.04□□□□□ -0.48
PHF3-201ENST00000262043 SMARCA5O60264 1052 aaPredicted RBP12.04□□□□□ -0.48
PHF3-201ENST00000262043 CAMK4Q16566 473 aa12.04□□□□□ -0.48
PHF3-201ENST00000262043 ANKLE2Q86XL3 938 aa12.04□□□□□ -0.48
PHF3-201ENST00000262043 CCDC66A2RUB6 948 aa12.04□□□□□ -0.48
PHF3-201ENST00000262043 IMMTQ16891 758 aaKnown RBP12.04□□□□□ -0.48
PHF3-201ENST00000262043 NUDT16Q96DE0 195 aaKnown RBP12.04□□□□□ -0.48
PHF3-201ENST00000262043 UQCRHLA0A096LP55 91 aa12.04□□□□□ -0.48
PHF3-201ENST00000262043 UQCRHP07919 91 aa12.04□□□□□ -0.48
PHF3-201ENST00000262043 MATR3P43243 847 aaKnown RBP eCLIP12.04□□□□□ -0.487e-7■■□□□ 14.2
PHF3-201ENST00000262043 CCDC112Q8NEF3 446 aa12.04□□□□□ -0.48
PHF3-201ENST00000262043 DUSP27Q5VZP5 1158 aa12.04□□□□□ -0.48
PHF3-201ENST00000262043 THUMPD2Q9BTF0 503 aaKnown RBP12.04□□□□□ -0.48
PHF3-201ENST00000262043 UNC13AQ9UPW8 1703 aa12.03□□□□□ -0.48
PHF3-201ENST00000262043 MPHOSPH10O00566 681 aaKnown RBP12.03□□□□□ -0.48
PHF3-201ENST00000262043 ZSCAN31Q96LW9 406 aaPredicted RBP12.03□□□□□ -0.48
PHF3-201ENST00000262043 ZC3H6P61129 1189 aaKnown RBP12.03□□□□□ -0.48
PHF3-201ENST00000262043 SYCE3A1L190 88 aa12.03□□□□□ -0.48
PHF3-201ENST00000262043 IGHMBP2P38935 993 aaKnown RBP12.03□□□□□ -0.48
PHF3-201ENST00000262043 USP5P45974 858 aa12.03□□□□□ -0.48
PHF3-201ENST00000262043 UPF3BQ9BZI7 483 aaKnown RBP12.03□□□□□ -0.48
PHF3-201ENST00000262043 ABCF2Q9UG63 623 aa12.03□□□□□ -0.48
PHF3-201ENST00000262043 PIP4K2BP78356 416 aa12.03□□□□□ -0.48
PHF3-201ENST00000262043 TXLNBQ8N3L3 684 aa12.03□□□□□ -0.48
PHF3-201ENST00000262043 AIDAQ96BJ3 306 aa12.03□□□□□ -0.48
PHF3-201ENST00000262043 MCM4P33991 863 aa12.02□□□□□ -0.48
PHF3-201ENST00000262043 ZNF76P36508 570 aa12.02□□□□□ -0.48
PHF3-201ENST00000262043 FAM193AP78312 1265 aa12.02□□□□□ -0.48
PHF3-201ENST00000262043 SF3B2Q13435 895 aaKnown RBP12.02□□□□□ -0.48
PHF3-201ENST00000262043 METTL24Q5JXM2 366 aa12.02□□□□□ -0.48
PHF3-201ENST00000262043 RPGRIP1LQ68CZ1 1315 aa12.02□□□□□ -0.48
PHF3-201ENST00000262043 WAPLQ7Z5K2 1190 aa12.02□□□□□ -0.49
PHF3-201ENST00000262043 STARD3NLO95772 234 aa12.02□□□□□ -0.49
PHF3-201ENST00000262043 ENOX2Q16206 610 aaKnown RBP12.02□□□□□ -0.49
PHF3-201ENST00000262043 KIF1BPQ96EK5 621 aa12.02□□□□□ -0.49
PHF3-201ENST00000262043 PRXQ9BXM0 1461 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms