RNA–Protein interactions for RNA: ENST00000261890.6

RAB11A-201, Transcript of RAB11A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB11A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11A-201ENST00000261890 MCM2P49736 904 aa9.38□□□□□ -0.91
RAB11A-201ENST00000261890 HOOK1Q9UJC3 728 aaKnown RBP9.38□□□□□ -0.91
RAB11A-201ENST00000261890 ARHGEF10O15013 1369 aa9.37□□□□□ -0.91
RAB11A-201ENST00000261890 SRGAP3O43295 1099 aa9.37□□□□□ -0.91
RAB11A-201ENST00000261890 DDB1Q16531 1140 aa9.37□□□□□ -0.91
RAB11A-201ENST00000261890 IL2RBP14784 551 aa9.37□□□□□ -0.91
RAB11A-201ENST00000261890 DNAJC2Q99543 621 aaKnown RBP9.37□□□□□ -0.91
RAB11A-201ENST00000261890 CHRNA2Q15822 529 aa9.37□□□□□ -0.91
RAB11A-201ENST00000261890 AKAP4Q5JQC9 854 aa9.37□□□□□ -0.91
RAB11A-201ENST00000261890 C11orf95C9JLR9 678 aaPredicted RBP9.37□□□□□ -0.91
RAB11A-201ENST00000261890 IFIT1P09914 478 aaKnown RBP9.37□□□□□ -0.91
RAB11A-201ENST00000261890 SKOR2Q2VWA4 1001 aaPredicted RBP9.37□□□□□ -0.91
RAB11A-201ENST00000261890 TMOD2Q9NZR1 351 aa9.37□□□□□ -0.91
RAB11A-201ENST00000261890 PZPP20742 1482 aa9.36□□□□□ -0.91
RAB11A-201ENST00000261890 PPP1R42Q7Z4L9 355 aa9.36□□□□□ -0.91
RAB11A-201ENST00000261890 CTNNA3Q9UI47 895 aa9.36□□□□□ -0.91
RAB11A-201ENST00000261890 GCP02774 474 aa9.36□□□□□ -0.91
RAB11A-201ENST00000261890 CAVIN4Q5BKX8 364 aa9.36□□□□□ -0.91
RAB11A-201ENST00000261890 MCTP1Q6DN14 999 aa9.36□□□□□ -0.91
RAB11A-201ENST00000261890 DNAAF4Q8WXU2 420 aa9.36□□□□□ -0.91
RAB11A-201ENST00000261890 SMC3Q9UQE7 1217 aa9.36□□□□□ -0.91
RAB11A-201ENST00000261890 TPM2P07951 284 aa9.35□□□□□ -0.91
RAB11A-201ENST00000261890 BICDL1Q6ZP65 573 aa9.35□□□□□ -0.91
RAB11A-201ENST00000261890 PIK3C2GO75747 1445 aa9.35□□□□□ -0.91
RAB11A-201ENST00000261890 C8orf37Q96NL8 207 aa9.35□□□□□ -0.91
RAB11A-201ENST00000261890 DNAJC5Q9H3Z4 198 aa9.35□□□□□ -0.91
RAB11A-201ENST00000261890 SOS1Q07889 1333 aaPredicted RBP9.35□□□□□ -0.91
RAB11A-201ENST00000261890 BCAR3O75815 825 aa9.35□□□□□ -0.91
RAB11A-201ENST00000261890 IP6K1Q92551 441 aa9.35□□□□□ -0.91
RAB11A-201ENST00000261890 RPGRQ92834 1020 aaKnown RBP9.35□□□□□ -0.91
RAB11A-201ENST00000261890 KIF1BPQ96EK5 621 aa9.35□□□□□ -0.91
RAB11A-201ENST00000261890 NUCB2P80303 420 aa9.35□□□□□ -0.91
RAB11A-201ENST00000261890 IFIT5Q13325 482 aaKnown RBP9.35□□□□□ -0.91
RAB11A-201ENST00000261890 SLF2Q8IX21 1173 aa9.35□□□□□ -0.91
RAB11A-201ENST00000261890 BCL11BQ9C0K0 894 aaPredicted RBP9.35□□□□□ -0.91
RAB11A-201ENST00000261890 ZNF287Q9HBT7 754 aa9.35□□□□□ -0.91
RAB11A-201ENST00000261890 TRMT112Q9UI30 125 aaKnown RBP9.35□□□□□ -0.91
RAB11A-201ENST00000261890 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.35□□□□□ -0.91
RAB11A-201ENST00000261890 MAGI3Q5TCQ9 1506 aa9.34□□□□□ -0.91
RAB11A-201ENST00000261890 RFC4P35249 363 aa9.34□□□□□ -0.91
RAB11A-201ENST00000261890 CDC5LQ99459 802 aaKnown RBP9.34□□□□□ -0.91
RAB11A-201ENST00000261890 METTL24Q5JXM2 366 aa9.34□□□□□ -0.91
RAB11A-201ENST00000261890 AACSQ86V21 672 aa9.34□□□□□ -0.91
RAB11A-201ENST00000261890 MYD88Q99836 296 aa9.34□□□□□ -0.91
RAB11A-201ENST00000261890 ARAP3Q8WWN8 1544 aa9.34□□□□□ -0.91
RAB11A-201ENST00000261890 YEATS2Q9ULM3 1422 aa9.34□□□□□ -0.91
RAB11A-201ENST00000261890 NLRP1Q9C000 1473 aa9.34□□□□□ -0.91
RAB11A-201ENST00000261890 POLR3AO14802 1390 aaPredicted RBP9.34□□□□□ -0.91
RAB11A-201ENST00000261890 PIK3R4Q99570 1358 aa9.34□□□□□ -0.91
RAB11A-201ENST00000261890 ANKRD18BA2A2Z9 1011 aa9.34□□□□□ -0.92
RAB11A-201ENST00000261890 ANKRD1Q15327 319 aa9.34□□□□□ -0.92
RAB11A-201ENST00000261890 CCDC43Q96MW1 224 aaKnown RBP9.34□□□□□ -0.92
RAB11A-201ENST00000261890 C22orf23Q9BZE7 217 aa9.34□□□□□ -0.92
RAB11A-201ENST00000261890 NKTRP30414 1462 aaKnown RBP9.33□□□□□ -0.92
RAB11A-201ENST00000261890 MBD5Q9P267 1494 aa9.33□□□□□ -0.92
RAB11A-201ENST00000261890 KDM5DQ9BY66 1539 aa9.33□□□□□ -0.92
RAB11A-201ENST00000261890 PDZRN3Q9UPQ7 1066 aa9.33□□□□□ -0.92
RAB11A-201ENST00000261890 ADGBQ8N7X0 1667 aa9.33□□□□□ -0.92
RAB11A-201ENST00000261890 PDCP20941 246 aa9.33□□□□□ -0.92
RAB11A-201ENST00000261890 HSP90AB2PQ58FF8 381 aa9.33□□□□□ -0.92
RAB11A-201ENST00000261890 AMER1Q5JTC6 1135 aaPredicted RBP9.33□□□□□ -0.92
RAB11A-201ENST00000261890 NBPF14Q5TI25 921 aa9.33□□□□□ -0.92
RAB11A-201ENST00000261890 EDC4Q6P2E9 1401 aaKnown RBP9.33□□□□□ -0.92
RAB11A-201ENST00000261890 CCAR1Q8IX12 1150 aaKnown RBP9.33□□□□□ -0.92
RAB11A-201ENST00000261890 SLAIN2Q9P270 581 aa9.33□□□□□ -0.92
RAB11A-201ENST00000261890 ZCCHC11Q5TAX3 1644 aaKnown RBP9.33□□□□□ -0.92
RAB11A-201ENST00000261890 IKQ13123 557 aaPredicted RBP9.33□□□□□ -0.92
RAB11A-201ENST00000261890 DCAF5Q96JK2 942 aa9.33□□□□□ -0.92
RAB11A-201ENST00000261890 SIL1Q9H173 461 aa9.33□□□□□ -0.92
RAB11A-201ENST00000261890 FANCIQ9NVI1 1328 aa9.33□□□□□ -0.92
RAB11A-201ENST00000261890 MSNP26038 577 aaKnown RBP9.32□□□□□ -0.92
RAB11A-201ENST00000261890 DCTN1Q14203 1278 aa9.32□□□□□ -0.92
RAB11A-201ENST00000261890 TPD52L1Q16890 204 aaPredicted RBP9.32□□□□□ -0.92
RAB11A-201ENST00000261890 MIS18AQ9NYP9 233 aa9.32□□□□□ -0.92
RAB11A-201ENST00000261890 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.32□□□□□ -0.92
RAB11A-201ENST00000261890 THUMPD2Q9BTF0 503 aaKnown RBP9.32□□□□□ -0.92
RAB11A-201ENST00000261890 CWC25Q9NXE8 425 aaPredicted RBP9.32□□□□□ -0.92
RAB11A-201ENST00000261890 PCDH11XQ9BZA7 1347 aa9.32□□□□□ -0.92
RAB11A-201ENST00000261890 PCDH11YQ9BZA8 1340 aa9.32□□□□□ -0.92
RAB11A-201ENST00000261890 SLC5A1P13866 664 aa9.32□□□□□ -0.92
RAB11A-201ENST00000261890 RARSP54136 660 aaKnown RBP9.32□□□□□ -0.92
RAB11A-201ENST00000261890 ST5P78524 1137 aa9.32□□□□□ -0.92
RAB11A-201ENST00000261890 KRT32Q14532 448 aa9.32□□□□□ -0.92
RAB11A-201ENST00000261890 LRP2BPQ9P2M1 347 aa9.32□□□□□ -0.92
RAB11A-201ENST00000261890 PLEKHG1Q9ULL1 1385 aa9.32□□□□□ -0.92
RAB11A-201ENST00000261890 RBM5P52756 815 aaKnown RBP eCLIP9.32□□□□□ -0.92
RAB11A-201ENST00000261890 FOXD4L1Q9NU39 408 aa9.32□□□□□ -0.92
RAB11A-201ENST00000261890 PLEKHG3A1L390 1219 aa9.31□□□□□ -0.92
RAB11A-201ENST00000261890 FLIIQ13045 1269 aa9.31□□□□□ -0.92
RAB11A-201ENST00000261890 TESK2Q96S53 571 aa9.31□□□□□ -0.92
RAB11A-201ENST00000261890 BABAM1Q9NWV8 329 aa9.31□□□□□ -0.92
RAB11A-201ENST00000261890 RAI14Q9P0K7 980 aa9.31□□□□□ -0.92
RAB11A-201ENST00000261890 POLKQ9UBT6 870 aa9.31□□□□□ -0.92
RAB11A-201ENST00000261890 NPC1L1Q9UHC9 1359 aa9.31□□□□□ -0.92
RAB11A-201ENST00000261890 GLRX3O76003 335 aaKnown RBP9.31□□□□□ -0.92
RAB11A-201ENST00000261890 EIF4A2Q14240 407 aaKnown RBP9.31□□□□□ -0.92
RAB11A-201ENST00000261890 CHD1LQ86WJ1 897 aa9.31□□□□□ -0.92
RAB11A-201ENST00000261890 ANKRD20A12PQ8NF67 263 aa9.31□□□□□ -0.92
RAB11A-201ENST00000261890 ARHGAP45Q92619 1136 aa9.31□□□□□ -0.92
RAB11A-201ENST00000261890 C1orf115Q9H7X2 142 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms