RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 MEIS3Q99687 375 aa23.9■■□□□ 1.42
SCARB1-201ENST00000261693 REREQ9P2R6 1566 aa23.89■■□□□ 1.42
SCARB1-201ENST00000261693 RGS12O14924 1447 aa23.89■■□□□ 1.41
SCARB1-201ENST00000261693 KIF24Q5T7B8 1368 aa23.89■■□□□ 1.41
SCARB1-201ENST00000261693 PKP1Q13835 747 aa23.89■■□□□ 1.41
SCARB1-201ENST00000261693 SOX12O15370 315 aa23.88■■□□□ 1.41
SCARB1-201ENST00000261693 MIS18AQ9NYP9 233 aa23.88■■□□□ 1.41
SCARB1-201ENST00000261693 NUTM2FA1L443 756 aa23.88■■□□□ 1.41
SCARB1-201ENST00000261693 MCTP1Q6DN14 999 aa23.88■■□□□ 1.41
SCARB1-201ENST00000261693 CHL1O00533 1208 aa23.87■■□□□ 1.41
SCARB1-201ENST00000261693 RPAP2Q8IXW5 612 aaPredicted RBP23.87■■□□□ 1.41
SCARB1-201ENST00000261693 PRR36Q9H6K5 1346 aa23.86■■□□□ 1.41
SCARB1-201ENST00000261693 RTL1A6NKG5 1358 aa23.86■■□□□ 1.41
SCARB1-201ENST00000261693 MON2Q7Z3U7 1717 aa23.86■■□□□ 1.41
SCARB1-201ENST00000261693 NCLP19338 710 aaKnown RBP23.85■■□□□ 1.41
SCARB1-201ENST00000261693 NRXN3Q9Y4C0 1643 aa23.85■■□□□ 1.41
SCARB1-201ENST00000261693 SLC4A2P04920 1241 aa23.84■■□□□ 1.41
SCARB1-201ENST00000261693 FAM69CQ0P6D2 419 aa23.84■■□□□ 1.41
SCARB1-201ENST00000261693 KLHL40Q2TBA0 621 aa23.84■■□□□ 1.41
SCARB1-201ENST00000261693 CLEC17AQ6ZS10 378 aa23.84■■□□□ 1.41
SCARB1-201ENST00000261693 HSP90AB2PQ58FF8 381 aa23.84■■□□□ 1.41
SCARB1-201ENST00000261693 CYB5RLQ6IPT4 315 aa23.83■■□□□ 1.41
SCARB1-201ENST00000261693 SLC4A10Q6U841 1118 aa23.83■■□□□ 1.41
SCARB1-201ENST00000261693 CASC1Q6TDU7 716 aa23.83■■□□□ 1.41
SCARB1-201ENST00000261693 ZGPATQ8N5A5 531 aaKnown RBP23.83■■□□□ 1.41
SCARB1-201ENST00000261693 NASPP49321 788 aaPredicted RBP23.82■■□□□ 1.4
SCARB1-201ENST00000261693 C3P01024 1663 aa23.82■■□□□ 1.4
SCARB1-201ENST00000261693 TSPOAP1O95153 1857 aa23.82■■□□□ 1.4
SCARB1-201ENST00000261693 ITSN1Q15811 1721 aa23.81■■□□□ 1.4
SCARB1-201ENST00000261693 F6X3S4 739 aa23.81■■□□□ 1.4
SCARB1-201ENST00000261693 SPATA31D1Q6ZQQ2 1576 aa23.81■■□□□ 1.4
SCARB1-201ENST00000261693 NUCB2P80303 420 aa23.8■■□□□ 1.4
SCARB1-201ENST00000261693 AKAP12Q02952 1782 aa23.8■■□□□ 1.4
SCARB1-201ENST00000261693 HAP1P54257 671 aaPredicted RBP23.8■■□□□ 1.4
SCARB1-201ENST00000261693 CAVIN1Q6NZI2 390 aaKnown RBP23.8■■□□□ 1.4
SCARB1-201ENST00000261693 FOXO3O43524 673 aa23.8■■□□□ 1.4
SCARB1-201ENST00000261693 G2E3Q7L622 706 aa23.8■■□□□ 1.4
SCARB1-201ENST00000261693 PTPRCP08575 1304 aa23.79■■□□□ 1.4
SCARB1-201ENST00000261693 ST18O60284 1047 aa23.79■■□□□ 1.4
SCARB1-201ENST00000261693 TSHZ3Q63HK5 1081 aa23.79■■□□□ 1.4
SCARB1-201ENST00000261693 TTC21BQ7Z4L5 1316 aa23.79■■□□□ 1.4
SCARB1-201ENST00000261693 CHAMP1Q96JM3 812 aa23.78■■□□□ 1.4
SCARB1-201ENST00000261693 KIAA0232Q92628 1395 aa23.78■■□□□ 1.4
SCARB1-201ENST00000261693 CYP2E1P05181 493 aaPredicted RBP23.78■■□□□ 1.4
SCARB1-201ENST00000261693 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.78■■□□□ 1.4
SCARB1-201ENST00000261693 LMBRD1Q9NUN5 540 aa23.77■■□□□ 1.4
SCARB1-201ENST00000261693 ACEP12821 1306 aa23.77■■□□□ 1.4
SCARB1-201ENST00000261693 REC8O95072 547 aa23.77■■□□□ 1.4
SCARB1-201ENST00000261693 UBE2Q2Q8WVN8 375 aa23.77■■□□□ 1.4
SCARB1-201ENST00000261693 PPP6R1Q9UPN7 881 aa23.76■■□□□ 1.39
SCARB1-201ENST00000261693 NRKQ7Z2Y5 1582 aa23.76■■□□□ 1.39
SCARB1-201ENST00000261693 CCDC173Q0VFZ6 552 aa23.76■■□□□ 1.39
SCARB1-201ENST00000261693 ERC2O15083 957 aa23.75■■□□□ 1.39
SCARB1-201ENST00000261693 PRPF40AO75400 957 aaKnown RBP23.75■■□□□ 1.39
SCARB1-201ENST00000261693 FOXD4L5Q5VV16 416 aaPredicted RBP23.75■■□□□ 1.39
SCARB1-201ENST00000261693 FOXD4L4Q8WXT5 416 aaPredicted RBP23.75■■□□□ 1.39
SCARB1-201ENST00000261693 EXOC6BQ9Y2D4 811 aa23.75■■□□□ 1.39
SCARB1-201ENST00000261693 ZSCAN23Q3MJ62 389 aa23.75■■□□□ 1.39
SCARB1-201ENST00000261693 ANP32BQ92688 251 aaKnown RBP23.74■■□□□ 1.39
SCARB1-201ENST00000261693 TSPYL4Q9UJ04 414 aa23.74■■□□□ 1.39
SCARB1-201ENST00000261693 HMMRO75330 724 aa23.74■■□□□ 1.39
SCARB1-201ENST00000261693 PDE1AP54750 535 aa23.74■■□□□ 1.39
SCARB1-201ENST00000261693 ZDHHC9Q9Y397 364 aa23.74■■□□□ 1.39
SCARB1-201ENST00000261693 ROBO2Q9HCK4 1378 aa23.74■■□□□ 1.39
SCARB1-201ENST00000261693 CRB1P82279 1406 aa23.73■■□□□ 1.39
SCARB1-201ENST00000261693 CWC22Q9HCG8 908 aaKnown RBP23.73■■□□□ 1.39
SCARB1-201ENST00000261693 IBTKQ9P2D0 1353 aaPredicted RBP23.73■■□□□ 1.39
SCARB1-201ENST00000261693 PPP1R9BQ96SB3 815 aa23.72■■□□□ 1.39
SCARB1-201ENST00000261693 RBM27Q9P2N5 1060 aaKnown RBP23.72■■□□□ 1.39
SCARB1-201ENST00000261693 PEAK1Q9H792 1746 aa23.72■■□□□ 1.39
SCARB1-201ENST00000261693 MTHFSDQ2M296 383 aaKnown RBP23.72■■□□□ 1.39
SCARB1-201ENST00000261693 MAP3K19Q56UN5 1328 aa23.72■■□□□ 1.39
SCARB1-201ENST00000261693 RTF1Q92541 710 aaKnown RBP23.71■■□□□ 1.39
SCARB1-201ENST00000261693 AGLP35573 1532 aa23.7■■□□□ 1.39
SCARB1-201ENST00000261693 NEK4P51957 841 aa23.7■■□□□ 1.38
SCARB1-201ENST00000261693 ZNF445P59923 1031 aa23.7■■□□□ 1.38
SCARB1-201ENST00000261693 ESF1Q9H501 851 aaKnown RBP23.7■■□□□ 1.38
SCARB1-201ENST00000261693 RIMS1Q86UR5 1692 aaKnown RBP23.7■■□□□ 1.38
SCARB1-201ENST00000261693 GPT2Q8TD30 523 aa23.7■■□□□ 1.38
SCARB1-201ENST00000261693 NECTIN2Q92692 538 aa23.7■■□□□ 1.38
SCARB1-201ENST00000261693 SIRT1Q96EB6 747 aa23.69■■□□□ 1.38
SCARB1-201ENST00000261693 OVOS2A0A0J9YW53 1432 aa23.69■■□□□ 1.38
SCARB1-201ENST00000261693 TECPR2O15040 1411 aa23.69■■□□□ 1.38
SCARB1-201ENST00000261693 OVOS2Q6IE36 1432 aa23.69■■□□□ 1.38
SCARB1-201ENST00000261693 RBSNQ9H1K0 784 aa23.68■■□□□ 1.38
SCARB1-201ENST00000261693 PRIM1P49642 420 aaKnown RBP23.68■■□□□ 1.38
SCARB1-201ENST00000261693 CCT4P50991 539 aaKnown RBP23.68■■□□□ 1.38
SCARB1-201ENST00000261693 NOL8Q76FK4 1167 aaKnown RBP23.68■■□□□ 1.38
SCARB1-201ENST00000261693 GNAI2P04899 355 aa23.67■■□□□ 1.38
SCARB1-201ENST00000261693 OSBPL3Q9H4L5 887 aa23.67■■□□□ 1.38
SCARB1-201ENST00000261693 HDGFP51858 240 aaKnown RBP23.66■■□□□ 1.38
SCARB1-201ENST00000261693 ZSCAN30Q86W11 494 aa23.65■■□□□ 1.38
SCARB1-201ENST00000261693 TMX3Q96JJ7 454 aa23.65■■□□□ 1.38
SCARB1-201ENST00000261693 PNMA6EA0A0J9YXQ4 647 aa23.65■■□□□ 1.38
SCARB1-201ENST00000261693 RILPL2Q969X0 211 aa23.65■■□□□ 1.38
SCARB1-201ENST00000261693 NSFL1CQ9UNZ2 370 aaKnown RBP23.65■■□□□ 1.38
SCARB1-201ENST00000261693 USP6P35125 1406 aa23.65■■□□□ 1.38
SCARB1-201ENST00000261693 PALD1Q9ULE6 856 aa23.64■■□□□ 1.38
SCARB1-201ENST00000261693 RGPD1P0DJD0 1748 aa23.64■■□□□ 1.38
SCARB1-201ENST00000261693 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms