RNA–Protein interactions for RNA: ENST00000257904.10

CDK4-201, Transcript of cyclin dependent kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK4, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-201ENST00000257904 DCTPP1Q9H773 170 aa21.01■□□□□ 0.95
CDK4-201ENST00000257904 DLG5Q8TDM6 1919 aa21.01■□□□□ 0.95
CDK4-201ENST00000257904 AATKQ6ZMQ8 1374 aa21.01■□□□□ 0.95
CDK4-201ENST00000257904 GOLGA6L22H0YM25 854 aa21■□□□□ 0.95
CDK4-201ENST00000257904 TRIM44Q96DX7 344 aaPredicted RBP21■□□□□ 0.95
CDK4-201ENST00000257904 RABEP1Q15276 862 aa21■□□□□ 0.95
CDK4-201ENST00000257904 TTC22Q5TAA0 569 aa20.99■□□□□ 0.95
CDK4-201ENST00000257904 NME9Q86XW9 330 aa20.99■□□□□ 0.95
CDK4-201ENST00000257904 IBTKQ9P2D0 1353 aaPredicted RBP20.98■□□□□ 0.95
CDK4-201ENST00000257904 BAG4O95429 457 aaKnown RBP20.98■□□□□ 0.95
CDK4-201ENST00000257904 KLHL40Q2TBA0 621 aa20.98■□□□□ 0.95
CDK4-201ENST00000257904 CPS1P31327 1500 aa20.98■□□□□ 0.95
CDK4-201ENST00000257904 FAM83GA6ND36 823 aa20.97■□□□□ 0.95
CDK4-201ENST00000257904 CEP170BQ9Y4F5 1589 aaPredicted RBP20.97■□□□□ 0.95
CDK4-201ENST00000257904 INTS3Q68E01 1043 aaKnown RBP20.97■□□□□ 0.95
CDK4-201ENST00000257904 ATP10DQ9P241 1426 aa20.96■□□□□ 0.95
CDK4-201ENST00000257904 ZRANB1Q9UGI0 708 aa20.96■□□□□ 0.95
CDK4-201ENST00000257904 SLC26A8Q96RN1 970 aa20.95■□□□□ 0.94
CDK4-201ENST00000257904 ANKRD44Q8N8A2 993 aa20.95■□□□□ 0.94
CDK4-201ENST00000257904 USP26Q9BXU7 913 aa20.95■□□□□ 0.94
CDK4-201ENST00000257904 DDX49Q9Y6V7 483 aaKnown RBP20.95■□□□□ 0.94
CDK4-201ENST00000257904 ROBO2Q9HCK4 1378 aa20.94■□□□□ 0.94
CDK4-201ENST00000257904 DCTN1Q14203 1278 aa20.94■□□□□ 0.94
CDK4-201ENST00000257904 NUDT16Q96DE0 195 aaKnown RBP20.94■□□□□ 0.94
CDK4-201ENST00000257904 RGS12O14924 1447 aa20.94■□□□□ 0.94
CDK4-201ENST00000257904 CCDC173Q0VFZ6 552 aa20.93■□□□□ 0.94
CDK4-201ENST00000257904 C16orf71Q8IYS4 520 aaPredicted RBP20.93■□□□□ 0.94
CDK4-201ENST00000257904 TBX22Q9Y458 520 aa20.93■□□□□ 0.94
CDK4-201ENST00000257904 NUCB2P80303 420 aa20.93■□□□□ 0.94
CDK4-201ENST00000257904 COG3Q96JB2 828 aa20.93■□□□□ 0.94
CDK4-201ENST00000257904 NASPP49321 788 aaPredicted RBP20.92■□□□□ 0.94
CDK4-201ENST00000257904 RRS1Q15050 365 aaKnown RBP20.92■□□□□ 0.94
CDK4-201ENST00000257904 PPP1R9BQ96SB3 815 aa20.92■□□□□ 0.94
CDK4-201ENST00000257904 NCKAP5LQ9HCH0 1330 aa20.92■□□□□ 0.94
CDK4-201ENST00000257904 CYP2E1P05181 493 aaPredicted RBP20.92■□□□□ 0.94
CDK4-201ENST00000257904 RPAP2Q8IXW5 612 aaPredicted RBP20.92■□□□□ 0.94
CDK4-201ENST00000257904 MON2Q7Z3U7 1717 aa20.91■□□□□ 0.94
CDK4-201ENST00000257904 PTPRUQ92729 1446 aa20.91■□□□□ 0.94
CDK4-201ENST00000257904 CEP85Q6P2H3 762 aa20.9■□□□□ 0.94
CDK4-201ENST00000257904 OTUD7AQ8TE49 926 aaPredicted RBP20.9■□□□□ 0.94
CDK4-201ENST00000257904 CCDC61Q9Y6R9 512 aa20.9■□□□□ 0.94
CDK4-201ENST00000257904 SETD1BQ9UPS6 1966 aaKnown RBP20.89■□□□□ 0.94
CDK4-201ENST00000257904 SDSP20132 328 aa20.89■□□□□ 0.93
CDK4-201ENST00000257904 HAP1P54257 671 aaPredicted RBP20.89■□□□□ 0.93
CDK4-201ENST00000257904 NRKQ7Z2Y5 1582 aa20.89■□□□□ 0.93
CDK4-201ENST00000257904 DIP2AQ14689 1571 aa20.89■□□□□ 0.93
CDK4-201ENST00000257904 MCTP1Q6DN14 999 aa20.89■□□□□ 0.93
CDK4-201ENST00000257904 ZNF142P52746 1687 aaPredicted RBP20.88■□□□□ 0.93
CDK4-201ENST00000257904 RTL1A6NKG5 1358 aa20.88■□□□□ 0.93
CDK4-201ENST00000257904 MSH6P52701 1360 aa20.88■□□□□ 0.93
CDK4-201ENST00000257904 ZNF445P59923 1031 aa20.88■□□□□ 0.93
CDK4-201ENST00000257904 CASC1Q6TDU7 716 aa20.88■□□□□ 0.93
CDK4-201ENST00000257904 AK9Q5TCS8 1911 aa20.88■□□□□ 0.93
CDK4-201ENST00000257904 CWC22Q9HCG8 908 aaKnown RBP20.87■□□□□ 0.93
CDK4-201ENST00000257904 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.87■□□□□ 0.93
CDK4-201ENST00000257904 ANP32BQ92688 251 aaKnown RBP20.87■□□□□ 0.93
CDK4-201ENST00000257904 AMOTL2Q9Y2J4 779 aa20.87■□□□□ 0.93
CDK4-201ENST00000257904 KRT24Q2M2I5 525 aa20.86■□□□□ 0.93
CDK4-201ENST00000257904 LMBRD1Q9NUN5 540 aa20.86■□□□□ 0.93
CDK4-201ENST00000257904 PTPRCP08575 1304 aa20.86■□□□□ 0.93
CDK4-201ENST00000257904 PRR36Q9H6K5 1346 aa20.86■□□□□ 0.93
CDK4-201ENST00000257904 KIAA0232Q92628 1395 aa20.86■□□□□ 0.93
CDK4-201ENST00000257904 CHL1O00533 1208 aa20.85■□□□□ 0.93
CDK4-201ENST00000257904 ST18O60284 1047 aa20.85■□□□□ 0.93
CDK4-201ENST00000257904 SMARCA5O60264 1052 aaPredicted RBP20.85■□□□□ 0.93
CDK4-201ENST00000257904 PKP1Q13835 747 aa20.85■□□□□ 0.93
CDK4-201ENST00000257904 AEBP1Q8IUX7 1158 aa20.85■□□□□ 0.93
CDK4-201ENST00000257904 AKAP12Q02952 1782 aa20.84■□□□□ 0.93
CDK4-201ENST00000257904 REC8O95072 547 aa20.84■□□□□ 0.93
CDK4-201ENST00000257904 ZSCAN23Q3MJ62 389 aa20.84■□□□□ 0.93
CDK4-201ENST00000257904 MEIS3Q99687 375 aa20.84■□□□□ 0.93
CDK4-201ENST00000257904 SULT6B1Q6IMI4 303 aa20.83■□□□□ 0.93
CDK4-201ENST00000257904 CAVIN1Q6NZI2 390 aaKnown RBP20.83■□□□□ 0.93
CDK4-201ENST00000257904 ZSCAN30Q86W11 494 aa20.83■□□□□ 0.93
CDK4-201ENST00000257904 ANKLE2Q86XL3 938 aa20.83■□□□□ 0.93
CDK4-201ENST00000257904 NUTM2FA1L443 756 aa20.82■□□□□ 0.92
CDK4-201ENST00000257904 APBB1O00213 710 aa20.82■□□□□ 0.92
CDK4-201ENST00000257904 RRP9O43818 475 aaKnown RBP20.82■□□□□ 0.92
CDK4-201ENST00000257904 EIF4A2Q14240 407 aaKnown RBP20.82■□□□□ 0.92
CDK4-201ENST00000257904 ITSN1Q15811 1721 aa20.82■□□□□ 0.92
CDK4-201ENST00000257904 ZGPATQ8N5A5 531 aaKnown RBP20.82■□□□□ 0.92
CDK4-201ENST00000257904 NCLP19338 710 aaKnown RBP20.81■□□□□ 0.92
CDK4-201ENST00000257904 ERC2O15083 957 aa20.81■□□□□ 0.92
CDK4-201ENST00000257904 HSP90AA2PQ14568 343 aaPredicted RBP20.81■□□□□ 0.92
CDK4-201ENST00000257904 MCM10Q7L590 875 aa20.81■□□□□ 0.92
CDK4-201ENST00000257904 ZDHHC9Q9Y397 364 aa20.79■□□□□ 0.92
CDK4-201ENST00000257904 HMMRO75330 724 aa20.79■□□□□ 0.92
CDK4-201ENST00000257904 TPM2P07951 284 aa20.79■□□□□ 0.92
CDK4-201ENST00000257904 OSBPL3Q9H4L5 887 aa20.79■□□□□ 0.92
CDK4-201ENST00000257904 XRN1Q8IZH2 1706 aaKnown RBP20.78■□□□□ 0.92
CDK4-201ENST00000257904 CRB1P82279 1406 aa20.77■□□□□ 0.92
CDK4-201ENST00000257904 PRPF40AO75400 957 aaKnown RBP20.77■□□□□ 0.92
CDK4-201ENST00000257904 GPT2Q8TD30 523 aa20.77■□□□□ 0.92
CDK4-201ENST00000257904 SLC4A2P04920 1241 aa20.76■□□□□ 0.91
CDK4-201ENST00000257904 HS1BP3Q53T59 392 aa20.76■□□□□ 0.91
CDK4-201ENST00000257904 RBSNQ9H1K0 784 aa20.76■□□□□ 0.91
CDK4-201ENST00000257904 ACEP12821 1306 aa20.76■□□□□ 0.91
CDK4-201ENST00000257904 TOPAZ1Q8N9V7 1692 aa20.76■□□□□ 0.91
CDK4-201ENST00000257904 MSNP26038 577 aaKnown RBP20.76■□□□□ 0.91
CDK4-201ENST00000257904 PDE1AP54750 535 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms