RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 ADGBQ8N7X0 1667 aa16.22■□□□□ 0.19
PRPF38A-201ENST00000257181 NECTIN2Q92692 538 aa16.22■□□□□ 0.19
PRPF38A-201ENST00000257181 TAOK2Q9UL54 1235 aa16.22■□□□□ 0.19
PRPF38A-201ENST00000257181 DBF4Q9UBU7 674 aaPredicted RBP16.21■□□□□ 0.19
PRPF38A-201ENST00000257181 RBM5P52756 815 aaKnown RBP eCLIP16.21■□□□□ 0.19
PRPF38A-201ENST00000257181 TRAF1Q13077 416 aa16.21■□□□□ 0.19
PRPF38A-201ENST00000257181 CTNNA3Q9UI47 895 aa16.21■□□□□ 0.19
PRPF38A-201ENST00000257181 CEP89Q96ST8 783 aa16.21■□□□□ 0.19
PRPF38A-201ENST00000257181 R3HCC1Q9Y3T6 440 aaKnown RBP16.21■□□□□ 0.19
PRPF38A-201ENST00000257181 ZGPATQ8N5A5 531 aaKnown RBP16.2■□□□□ 0.18
PRPF38A-201ENST00000257181 GSTO1P78417 241 aa16.2■□□□□ 0.18
PRPF38A-201ENST00000257181 IL27Q8NEV9 243 aa16.2■□□□□ 0.18
PRPF38A-201ENST00000257181 EYA3Q99504 573 aa16.2■□□□□ 0.18
PRPF38A-201ENST00000257181 DNAI2Q9GZS0 605 aa16.2■□□□□ 0.18
PRPF38A-201ENST00000257181 AKAP4Q5JQC9 854 aa16.2■□□□□ 0.18
PRPF38A-201ENST00000257181 SLC5A1P13866 664 aa16.2■□□□□ 0.18
PRPF38A-201ENST00000257181 RRS1Q15050 365 aaKnown RBP16.2■□□□□ 0.18
PRPF38A-201ENST00000257181 IKQ13123 557 aaPredicted RBP16.19■□□□□ 0.18
PRPF38A-201ENST00000257181 MPRIPQ6WCQ1 1025 aa16.19■□□□□ 0.18
PRPF38A-201ENST00000257181 UGGT1Q9NYU2 1555 aa16.19■□□□□ 0.18
PRPF38A-201ENST00000257181 BABAM1Q9NWV8 329 aa16.19■□□□□ 0.18
PRPF38A-201ENST00000257181 RTCBQ9Y3I0 505 aaKnown RBP16.19■□□□□ 0.18
PRPF38A-201ENST00000257181 PDE3AQ14432 1141 aa16.19■□□□□ 0.18
PRPF38A-201ENST00000257181 ALDH1L2Q3SY69 923 aa16.19■□□□□ 0.18
PRPF38A-201ENST00000257181 KRI1Q8N9T8 703 aaKnown RBP16.18■□□□□ 0.18
PRPF38A-201ENST00000257181 ANKRD18BA2A2Z9 1011 aa16.18■□□□□ 0.18
PRPF38A-201ENST00000257181 IL16Q14005 1332 aa16.18■□□□□ 0.18
PRPF38A-201ENST00000257181 RAB11FIP3O75154 756 aa16.18■□□□□ 0.18
PRPF38A-201ENST00000257181 SLC4A2P04920 1241 aa16.18■□□□□ 0.18
PRPF38A-201ENST00000257181 PDIA4P13667 645 aaKnown RBP16.18■□□□□ 0.18
PRPF38A-201ENST00000257181 HOOK2Q96ED9 719 aa16.18■□□□□ 0.18
PRPF38A-201ENST00000257181 RRP1P56182 461 aaKnown RBP16.18■□□□□ 0.18
PRPF38A-201ENST00000257181 SUPT20HQ8NEM7 779 aa16.18■□□□□ 0.18
PRPF38A-201ENST00000257181 USP21Q9UK80 565 aa16.18■□□□□ 0.18
PRPF38A-201ENST00000257181 NME9Q86XW9 330 aa16.18■□□□□ 0.18
PRPF38A-201ENST00000257181 DCAF5Q96JK2 942 aa16.17■□□□□ 0.18
PRPF38A-201ENST00000257181 FAM177BA6PVY3 158 aa16.16■□□□□ 0.18
PRPF38A-201ENST00000257181 PLIN1O60240 522 aa16.16■□□□□ 0.18
PRPF38A-201ENST00000257181 FSD1Q9BTV5 496 aa16.16■□□□□ 0.18
PRPF38A-201ENST00000257181 CCDC152Q4G0S7 254 aa16.16■□□□□ 0.18
PRPF38A-201ENST00000257181 ANKRD20A12PQ8NF67 263 aa16.16■□□□□ 0.18
PRPF38A-201ENST00000257181 EHMT1Q9H9B1 1298 aa16.16■□□□□ 0.18
PRPF38A-201ENST00000257181 SETDB2Q96T68 719 aa16.16■□□□□ 0.18
PRPF38A-201ENST00000257181 ANO2Q9NQ90 1003 aa16.16■□□□□ 0.18
PRPF38A-201ENST00000257181 PTPRCP08575 1304 aa16.15■□□□□ 0.18
PRPF38A-201ENST00000257181 SURF6O75683 361 aaKnown RBP16.15■□□□□ 0.18
PRPF38A-201ENST00000257181 PDE6BP35913 854 aa16.15■□□□□ 0.18
PRPF38A-201ENST00000257181 CLASP1Q7Z460 1538 aa16.15■□□□□ 0.18
PRPF38A-201ENST00000257181 RPAP2Q8IXW5 612 aaPredicted RBP16.15■□□□□ 0.18
PRPF38A-201ENST00000257181 LMOD1P29536 600 aaPredicted RBP16.15■□□□□ 0.18
PRPF38A-201ENST00000257181 IFIT5Q13325 482 aaKnown RBP16.14■□□□□ 0.17
PRPF38A-201ENST00000257181 DNAJC2Q99543 621 aaKnown RBP16.14■□□□□ 0.17
PRPF38A-201ENST00000257181 ANKIB1Q9P2G1 1089 aa16.14■□□□□ 0.17
PRPF38A-201ENST00000257181 TRMT112Q9UI30 125 aaKnown RBP16.14■□□□□ 0.17
PRPF38A-201ENST00000257181 CCDC178Q5BJE1 867 aa16.14■□□□□ 0.17
PRPF38A-201ENST00000257181 MYL6BP14649 208 aa16.14■□□□□ 0.17
PRPF38A-201ENST00000257181 IP6K1Q92551 441 aa16.14■□□□□ 0.17
PRPF38A-201ENST00000257181 PREX2Q70Z35 1606 aa16.14■□□□□ 0.17
PRPF38A-201ENST00000257181 EDC4Q6P2E9 1401 aaKnown RBP16.13■□□□□ 0.17
PRPF38A-201ENST00000257181 PLXNC1O60486 1568 aa16.13■□□□□ 0.17
PRPF38A-201ENST00000257181 SOGA3Q5TF21 947 aa16.13■□□□□ 0.17
PRPF38A-201ENST00000257181 RXRBP28702 533 aa16.13■□□□□ 0.17
PRPF38A-201ENST00000257181 TTF1Q15361 905 aaPredicted RBP16.13■□□□□ 0.17
PRPF38A-201ENST00000257181 NCBP3Q53F19 620 aaKnown RBP16.13■□□□□ 0.17
PRPF38A-201ENST00000257181 CCDC87Q9NVE4 849 aa16.13■□□□□ 0.17
PRPF38A-201ENST00000257181 NBPF6Q5VWK0 638 aa16.13■□□□□ 0.17
PRPF38A-201ENST00000257181 NBPF5PQ86XG9 351 aaPredicted RBP16.13■□□□□ 0.17
PRPF38A-201ENST00000257181 NBPF4Q96M43 638 aa16.13■□□□□ 0.17
PRPF38A-201ENST00000257181 SAMD9LQ8IVG5 1584 aa16.12■□□□□ 0.17
PRPF38A-201ENST00000257181 ATP6V1AP38606 617 aa16.12■□□□□ 0.17
PRPF38A-201ENST00000257181 BICDL1Q6ZP65 573 aa16.12■□□□□ 0.17
PRPF38A-201ENST00000257181 PDZRN3Q9UPQ7 1066 aa16.12■□□□□ 0.17
PRPF38A-201ENST00000257181 TPTE2Q6XPS3 522 aa16.12■□□□□ 0.17
PRPF38A-201ENST00000257181 TFCP2L1Q9NZI6 479 aa16.12■□□□□ 0.17
PRPF38A-201ENST00000257181 ADAMTS8Q9UP79 889 aa16.12■□□□□ 0.17
PRPF38A-201ENST00000257181 A2ML1A8K2U0 1454 aa16.12■□□□□ 0.17
PRPF38A-201ENST00000257181 PRAG1Q86YV5 1406 aa16.12■□□□□ 0.17
PRPF38A-201ENST00000257181 TPM1P09493 284 aa16.11■□□□□ 0.17
PRPF38A-201ENST00000257181 MCM2P49736 904 aa16.11■□□□□ 0.17
PRPF38A-201ENST00000257181 CWC25Q9NXE8 425 aaPredicted RBP16.11■□□□□ 0.17
PRPF38A-201ENST00000257181 TMPOP42166 694 aaKnown RBP16.11■□□□□ 0.17
PRPF38A-201ENST00000257181 ANKRD1Q15327 319 aa16.11■□□□□ 0.17
PRPF38A-201ENST00000257181 JDP2Q8WYK2 163 aa16.11■□□□□ 0.17
PRPF38A-201ENST00000257181 TSR1Q2NL82 804 aaKnown RBP16.11■□□□□ 0.17
PRPF38A-201ENST00000257181 ZSCAN29Q8IWY8 852 aaPredicted RBP16.11■□□□□ 0.17
PRPF38A-201ENST00000257181 METTL24Q5JXM2 366 aa16.1■□□□□ 0.17
PRPF38A-201ENST00000257181 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.1■□□□□ 0.17
PRPF38A-201ENST00000257181 CDC45O75419 566 aa16.1■□□□□ 0.17
PRPF38A-201ENST00000257181 B4DLN1 442 aa16.1■□□□□ 0.17
PRPF38A-201ENST00000257181 BAG3O95817 575 aa16.1■□□□□ 0.17
PRPF38A-201ENST00000257181 TRIM21P19474 475 aaKnown RBP16.1■□□□□ 0.17
PRPF38A-201ENST00000257181 MRPL12P52815 198 aaKnown RBP16.1■□□□□ 0.17
PRPF38A-201ENST00000257181 EXOSC9Q06265 439 aaKnown RBP16.1■□□□□ 0.17
PRPF38A-201ENST00000257181 ANKRD2Q9GZV1 360 aa16.1■□□□□ 0.17
PRPF38A-201ENST00000257181 GCP02774 474 aa16.1■□□□□ 0.17
PRPF38A-201ENST00000257181 TNIP1Q15025 636 aa16.1■□□□□ 0.17
PRPF38A-201ENST00000257181 RBM17Q96I25 401 aaKnown RBP16.1■□□□□ 0.17
PRPF38A-201ENST00000257181 PZPP20742 1482 aa16.1■□□□□ 0.17
PRPF38A-201ENST00000257181 CDKL5O76039 1030 aa16.1■□□□□ 0.17
PRPF38A-201ENST00000257181 PARP10Q53GL7 1025 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 245.8 ms