RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 PLS1Q14651 629 aa20.15■□□□□ 0.82
SORT1-201ENST00000256637 CFAP65Q6ZU64 1925 aaKnown RBP20.15■□□□□ 0.82
SORT1-201ENST00000256637 POLD1P28340 1107 aa20.15■□□□□ 0.82
SORT1-201ENST00000256637 NEBLO76041 1014 aa20.15■□□□□ 0.82
SORT1-201ENST00000256637 ERC1Q8IUD2 1116 aa20.14■□□□□ 0.82
SORT1-201ENST00000256637 MAGEC2Q9UBF1 373 aaPredicted RBP20.14■□□□□ 0.82
SORT1-201ENST00000256637 JAG2Q9Y219 1238 aa20.14■□□□□ 0.81
SORT1-201ENST00000256637 PDE4AP27815 886 aa20.14■□□□□ 0.81
SORT1-201ENST00000256637 PNISRQ8TF01 805 aaKnown RBP20.14■□□□□ 0.81
SORT1-201ENST00000256637 TXLNAP40222 546 aa20.13■□□□□ 0.81
SORT1-201ENST00000256637 ZNF526Q8TF50 670 aaPredicted RBP20.13■□□□□ 0.81
SORT1-201ENST00000256637 IQSEC3Q9UPP2 1182 aaPredicted RBP20.13■□□□□ 0.81
SORT1-201ENST00000256637 NBPF6Q5VWK0 638 aa20.13■□□□□ 0.81
SORT1-201ENST00000256637 NBPF5PQ86XG9 351 aaPredicted RBP20.13■□□□□ 0.81
SORT1-201ENST00000256637 NBPF4Q96M43 638 aa20.13■□□□□ 0.81
SORT1-201ENST00000256637 LRRCC1Q9C099 1032 aa20.13■□□□□ 0.81
SORT1-201ENST00000256637 SDF4Q9BRK5 362 aa20.12■□□□□ 0.81
SORT1-201ENST00000256637 VEZTQ9HBM0 779 aa20.12■□□□□ 0.81
SORT1-201ENST00000256637 DDX46Q7L014 1031 aaKnown RBP20.12■□□□□ 0.81
SORT1-201ENST00000256637 NSD3Q9BZ95 1437 aa20.12■□□□□ 0.81
SORT1-201ENST00000256637 SMARCA5O60264 1052 aaPredicted RBP20.12■□□□□ 0.81
SORT1-201ENST00000256637 PICALMQ13492 652 aa20.12■□□□□ 0.81
SORT1-201ENST00000256637 ANKRD24Q8TF21 1146 aa20.12■□□□□ 0.81
SORT1-201ENST00000256637 KIF14Q15058 1648 aa20.11■□□□□ 0.81
SORT1-201ENST00000256637 RANBP6O60518 1105 aaKnown RBP20.11■□□□□ 0.81
SORT1-201ENST00000256637 SSR1P43307 286 aaKnown RBP20.11■□□□□ 0.81
SORT1-201ENST00000256637 DDX17Q92841 729 aaKnown RBP20.11■□□□□ 0.81
SORT1-201ENST00000256637 PLB1Q6P1J6 1458 aa20.11■□□□□ 0.81
SORT1-201ENST00000256637 CASKIN1Q8WXD9 1431 aa20.11■□□□□ 0.81
SORT1-201ENST00000256637 CCDC144CPQ8IYA2 1237 aa20.11■□□□□ 0.81
SORT1-201ENST00000256637 NBPF8Q3BBV2 869 aa20.1■□□□□ 0.81
SORT1-201ENST00000256637 NBPF14Q5TI25 921 aa20.1■□□□□ 0.81
SORT1-201ENST00000256637 CAGE1Q8TC20 777 aa20.1■□□□□ 0.81
SORT1-201ENST00000256637 SMC2O95347 1197 aa20.1■□□□□ 0.81
SORT1-201ENST00000256637 NCAPD3P42695 1498 aa20.1■□□□□ 0.81
SORT1-201ENST00000256637 CCDC7Q96M83 1385 aa20.09■□□□□ 0.81
SORT1-201ENST00000256637 UBA5Q9GZZ9 404 aa20.09■□□□□ 0.81
SORT1-201ENST00000256637 EMILIN1Q9Y6C2 1016 aa20.09■□□□□ 0.81
SORT1-201ENST00000256637 LRPPRCP42704 1394 aaKnown RBP20.09■□□□□ 0.81
SORT1-201ENST00000256637 DDX11L8A8MPP1 907 aa20.09■□□□□ 0.81
SORT1-201ENST00000256637 F6X3S4 739 aa20.09■□□□□ 0.81
SORT1-201ENST00000256637 BOLA2Q9H3K6 86 aa20.08■□□□□ 0.81
SORT1-201ENST00000256637 SEC63Q9UGP8 760 aaKnown RBP20.08■□□□□ 0.81
SORT1-201ENST00000256637 CDC45O75419 566 aa20.08■□□□□ 0.81
SORT1-201ENST00000256637 IPO9Q96P70 1041 aaKnown RBP20.08■□□□□ 0.81
SORT1-201ENST00000256637 PSMD1Q99460 953 aa20.08■□□□□ 0.81
SORT1-201ENST00000256637 TSPOAP1O95153 1857 aa20.08■□□□□ 0.81
SORT1-201ENST00000256637 IFIT5Q13325 482 aaKnown RBP20.08■□□□□ 0.81
SORT1-201ENST00000256637 DUSP27Q5VZP5 1158 aa20.08■□□□□ 0.81
SORT1-201ENST00000256637 ZSCAN25Q6NSZ9 544 aa20.08■□□□□ 0.8
SORT1-201ENST00000256637 CCDC61Q9Y6R9 512 aa20.08■□□□□ 0.8
SORT1-201ENST00000256637 MYO1BO43795 1136 aa20.08■□□□□ 0.8
SORT1-201ENST00000256637 DRC1Q96MC2 740 aa20.08■□□□□ 0.8
SORT1-201ENST00000256637 PARP3Q9Y6F1 533 aa20.07■□□□□ 0.8
SORT1-201ENST00000256637 ERICH3Q5RHP9 1530 aa20.07■□□□□ 0.8
SORT1-201ENST00000256637 ZNF444Q8N0Y2 327 aaPredicted RBP20.07■□□□□ 0.8
SORT1-201ENST00000256637 NEK4P51957 841 aa20.07■□□□□ 0.8
SORT1-201ENST00000256637 PRKG1Q13976 671 aa20.07■□□□□ 0.8
SORT1-201ENST00000256637 CCDC8Q9H0W5 538 aaPredicted RBP20.07■□□□□ 0.8
SORT1-201ENST00000256637 ANXA1P04083 346 aa20.06■□□□□ 0.8
SORT1-201ENST00000256637 SETDB2Q96T68 719 aa20.06■□□□□ 0.8
SORT1-201ENST00000256637 IFIT1P09914 478 aaKnown RBP20.06■□□□□ 0.8
SORT1-201ENST00000256637 TRIM22Q8IYM9 498 aa20.06■□□□□ 0.8
SORT1-201ENST00000256637 C22orf23Q9BZE7 217 aa20.06■□□□□ 0.8
SORT1-201ENST00000256637 CCT4P50991 539 aaKnown RBP20.05■□□□□ 0.8
SORT1-201ENST00000256637 PLEKHH2Q8IVE3 1493 aa20.05■□□□□ 0.8
SORT1-201ENST00000256637 DDX11Q96FC9 970 aa20.05■□□□□ 0.8
SORT1-201ENST00000256637 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.05■□□□□ 0.8
SORT1-201ENST00000256637 EHBP1L1Q8N3D4 1523 aa20.05■□□□□ 0.8
SORT1-201ENST00000256637 PPFIA3O75145 1194 aa20.04■□□□□ 0.8
SORT1-201ENST00000256637 SLC5A1P13866 664 aa20.04■□□□□ 0.8
SORT1-201ENST00000256637 SLC39A6Q13433 755 aa20.04■□□□□ 0.8
SORT1-201ENST00000256637 EAPPQ56P03 285 aaPredicted RBP20.04■□□□□ 0.8
SORT1-201ENST00000256637 FAM135AQ9P2D6 1515 aa20.04■□□□□ 0.8
SORT1-201ENST00000256637 EXOC6BQ9Y2D4 811 aa20.04■□□□□ 0.8
SORT1-201ENST00000256637 ANKRD18BA2A2Z9 1011 aa20.04■□□□□ 0.8
SORT1-201ENST00000256637 STK38Q15208 465 aa20.04■□□□□ 0.8
SORT1-201ENST00000256637 DDB1Q16531 1140 aa20.04■□□□□ 0.8
SORT1-201ENST00000256637 DHX37Q8IY37 1157 aaKnown RBP20.04■□□□□ 0.8
SORT1-201ENST00000256637 RAB11FIP4Q86YS3 637 aa20.03■□□□□ 0.8
SORT1-201ENST00000256637 DNMBPQ6XZF7 1577 aa20.03■□□□□ 0.8
SORT1-201ENST00000256637 MSL1Q68DK7 614 aa20.03■□□□□ 0.8
SORT1-201ENST00000256637 AKNAQ7Z591 1439 aa20.03■□□□□ 0.8
SORT1-201ENST00000256637 IDI1Q13907 227 aa20.03■□□□□ 0.8
SORT1-201ENST00000256637 IQGAP2Q13576 1575 aa20.03■□□□□ 0.8
SORT1-201ENST00000256637 CCDC24Q8N4L8 307 aa20.02■□□□□ 0.8
SORT1-201ENST00000256637 MAP3K2Q9Y2U5 619 aa20.02■□□□□ 0.8
SORT1-201ENST00000256637 ANKRD62A6NC57 917 aa20.02■□□□□ 0.8
SORT1-201ENST00000256637 RNF214Q8ND24 703 aa20.02■□□□□ 0.8
SORT1-201ENST00000256637 HIP1O00291 1037 aa20.02■□□□□ 0.8
SORT1-201ENST00000256637 LARP6Q9BRS8 491 aaKnown RBP20.02■□□□□ 0.8
SORT1-201ENST00000256637 SNRKQ9NRH2 765 aa20.02■□□□□ 0.8
SORT1-201ENST00000256637 SAMM50Q9Y512 469 aa20.02■□□□□ 0.79
SORT1-201ENST00000256637 FIBPO43427 364 aa20.01■□□□□ 0.79
SORT1-201ENST00000256637 FAM98CQ17RN3 349 aaKnown RBP20.01■□□□□ 0.79
SORT1-201ENST00000256637 GPR162Q16538 588 aa20.01■□□□□ 0.79
SORT1-201ENST00000256637 TNIP1Q15025 636 aa20.01■□□□□ 0.79
SORT1-201ENST00000256637 TAF7Q15545 349 aaPredicted RBP20.01■□□□□ 0.79
SORT1-201ENST00000256637 LRRC59Q96AG4 307 aaKnown RBP20.01■□□□□ 0.79
SORT1-201ENST00000256637 CADPS2Q86UW7 1296 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms