RNA–Protein interactions for RNA: ENST00000254998.2

NXT1-201, Transcript of nuclear transport factor 2 like export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXT1, Length 1,123 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXT1-201ENST00000254998 PARD3Q8TEW0 1356 aa29.17■■■□□ 2.26
NXT1-201ENST00000254998 COL3A1P02461 1466 aaPredicted RBP29.16■■■□□ 2.26
NXT1-201ENST00000254998 PKD1L3Q7Z443 1732 aa29.15■■■□□ 2.26
NXT1-201ENST00000254998 PPP2R1AP30153 589 aa29.15■■■□□ 2.26
NXT1-201ENST00000254998 BAG6P46379 1132 aa29.15■■■□□ 2.26
NXT1-201ENST00000254998 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.15■■■□□ 2.26
NXT1-201ENST00000254998 DDX54Q8TDD1 881 aaKnown RBP29.14■■■□□ 2.26
NXT1-201ENST00000254998 DEFB132Q7Z7B7 95 aa29.13■■■□□ 2.25
NXT1-201ENST00000254998 BCL11BQ9C0K0 894 aaPredicted RBP29.13■■■□□ 2.25
NXT1-201ENST00000254998 KDRP35968 1356 aa29.13■■■□□ 2.25
NXT1-201ENST00000254998 ZNF316A6NFI3 1004 aaPredicted RBP29.12■■■□□ 2.25
NXT1-201ENST00000254998 DIAPH1O60610 1272 aaKnown RBP29.12■■■□□ 2.25
NXT1-201ENST00000254998 PCDH11XQ9BZA7 1347 aa29.12■■■□□ 2.25
NXT1-201ENST00000254998 PCDH11YQ9BZA8 1340 aa29.12■■■□□ 2.25
NXT1-201ENST00000254998 SPG7Q9UQ90 795 aa29.1■■■□□ 2.25
NXT1-201ENST00000254998 NHSQ6T4R5 1651 aa29.09■■■□□ 2.25
NXT1-201ENST00000254998 APBA3O96018 575 aa29.09■■■□□ 2.25
NXT1-201ENST00000254998 CFAP53Q96M91 514 aa29.09■■■□□ 2.25
NXT1-201ENST00000254998 RALBP1Q15311 655 aa29.08■■■□□ 2.25
NXT1-201ENST00000254998 SULT6B1Q6IMI4 303 aa29.07■■■□□ 2.24
NXT1-201ENST00000254998 AEBP1Q8IUX7 1158 aa29.07■■■□□ 2.24
NXT1-201ENST00000254998 CYP27B1O15528 508 aa29.06■■■□□ 2.24
NXT1-201ENST00000254998 EN1Q05925 392 aaPredicted RBP29.05■■■□□ 2.24
NXT1-201ENST00000254998 PTF1AQ7RTS3 328 aa29.05■■■□□ 2.24
NXT1-201ENST00000254998 CAMKK2Q96RR4 588 aa29.05■■■□□ 2.24
NXT1-201ENST00000254998 RGPD3A6NKT7 1758 aaPredicted RBP29.03■■■□□ 2.24
NXT1-201ENST00000254998 RGPD4Q7Z3J3 1758 aa29.03■■■□□ 2.24
NXT1-201ENST00000254998 KCNQ2O43526 872 aa29.03■■■□□ 2.24
NXT1-201ENST00000254998 ACSBG1Q96GR2 724 aa29.03■■■□□ 2.24
NXT1-201ENST00000254998 PLSCR1O15162 318 aa29.02■■■□□ 2.24
NXT1-201ENST00000254998 NKX1-1Q15270 411 aaPredicted RBP29.02■■■□□ 2.24
NXT1-201ENST00000254998 PLEKHO1Q53GL0 409 aaPredicted RBP29.02■■■□□ 2.24
NXT1-201ENST00000254998 AMOTQ4VCS5 1084 aa29.01■■■□□ 2.23
NXT1-201ENST00000254998 KAT6BQ8WYB5 2073 aa29.01■■■□□ 2.23
NXT1-201ENST00000254998 DOT1LQ8TEK3 1739 aa29■■■□□ 2.23
NXT1-201ENST00000254998 EZH2Q15910 746 aaKnown RBP28.99■■■□□ 2.23
NXT1-201ENST00000254998 IFNL2Q8IZJ0 200 aa28.99■■■□□ 2.23
NXT1-201ENST00000254998 PHKG2P15735 406 aa28.98■■■□□ 2.23
NXT1-201ENST00000254998 NUDCQ9Y266 331 aa28.98■■■□□ 2.23
NXT1-201ENST00000254998 HMOX1P09601 288 aa28.97■■■□□ 2.23
NXT1-201ENST00000254998 BTAF1O14981 1849 aa28.97■■■□□ 2.23
NXT1-201ENST00000254998 RREB1Q92766 1687 aa28.96■■■□□ 2.23
NXT1-201ENST00000254998 U2SURPO15042 1029 aaKnown RBP28.96■■■□□ 2.23
NXT1-201ENST00000254998 PRIM1P49642 420 aaKnown RBP28.96■■■□□ 2.23
NXT1-201ENST00000254998 MYBBP1AQ9BQG0 1328 aaKnown RBP28.94■■■□□ 2.22
NXT1-201ENST00000254998 ZNF530Q6P9A1 599 aaPredicted RBP28.93■■■□□ 2.22
NXT1-201ENST00000254998 TOGARAM1Q9Y4F4 1720 aa28.93■■■□□ 2.22
NXT1-201ENST00000254998 HSP90AB1P08238 724 aaKnown RBP28.92■■■□□ 2.22
NXT1-201ENST00000254998 PRKRIP1Q9H875 184 aaPredicted RBP28.92■■■□□ 2.22
NXT1-201ENST00000254998 SYTL4Q96C24 671 aaPredicted RBP28.91■■■□□ 2.22
NXT1-201ENST00000254998 NUP188Q5SRE5 1749 aa28.89■■■□□ 2.22
NXT1-201ENST00000254998 C1orf141Q5JVX7 400 aa28.88■■■□□ 2.21
NXT1-201ENST00000254998 PROM2Q8N271 834 aa28.88■■■□□ 2.21
NXT1-201ENST00000254998 DCAF5Q96JK2 942 aa28.88■■■□□ 2.21
NXT1-201ENST00000254998 RSPH6AQ9H0K4 717 aa28.88■■■□□ 2.21
NXT1-201ENST00000254998 ITGB4P16144 1822 aa28.87■■■□□ 2.21
NXT1-201ENST00000254998 U2AF1L5P0DN76 240 aaPredicted RBP28.87■■■□□ 2.21
NXT1-201ENST00000254998 U2AF1Q01081 240 aaKnown RBP eCLIP28.87■■■□□ 2.21
NXT1-201ENST00000254998 FCHSD2O94868 740 aa28.86■■■□□ 2.21
NXT1-201ENST00000254998 TXNRD1Q16881 649 aa28.86■■■□□ 2.21
NXT1-201ENST00000254998 AKAP4Q5JQC9 854 aa28.85■■■□□ 2.21
NXT1-201ENST00000254998 KDM6AO15550 1401 aaPredicted RBP28.85■■■□□ 2.21
NXT1-201ENST00000254998 ERVV-2B6SEH9 535 aa28.84■■■□□ 2.21
NXT1-201ENST00000254998 MTHFSDQ2M296 383 aaKnown RBP28.83■■■□□ 2.21
NXT1-201ENST00000254998 PRKAR2BP31323 418 aa28.82■■■□□ 2.2
NXT1-201ENST00000254998 MPRIPQ6WCQ1 1025 aa28.82■■■□□ 2.2
NXT1-201ENST00000254998 PIGBQ92521 554 aa28.82■■■□□ 2.2
NXT1-201ENST00000254998 TMOD3Q9NYL9 352 aa28.81■■■□□ 2.2
NXT1-201ENST00000254998 LY75O60449 1722 aa28.8■■■□□ 2.2
NXT1-201ENST00000254998 SLC27A3Q5K4L6 730 aa28.8■■■□□ 2.2
NXT1-201ENST00000254998 GAS2L2Q8NHY3 880 aa28.8■■■□□ 2.2
NXT1-201ENST00000254998 NBPF14Q5TI25 921 aa28.79■■■□□ 2.2
NXT1-201ENST00000254998 SMARCC1Q92922 1105 aaPredicted RBP28.78■■■□□ 2.2
NXT1-201ENST00000254998 PHACTR3Q96KR7 559 aa28.78■■■□□ 2.2
NXT1-201ENST00000254998 SCN11AQ9UI33 1791 aa28.78■■■□□ 2.2
NXT1-201ENST00000254998 ADAMTS7Q9UKP4 1686 aa28.77■■■□□ 2.2
NXT1-201ENST00000254998 LRRC4BQ9NT99 713 aa28.75■■■□□ 2.19
NXT1-201ENST00000254998 PAPPAQ13219 1627 aa28.75■■■□□ 2.19
NXT1-201ENST00000254998 PALLDQ8WX93 1383 aa28.75■■■□□ 2.19
NXT1-201ENST00000254998 MAP3K5Q99683 1374 aa28.74■■■□□ 2.19
NXT1-201ENST00000254998 MRC1P22897 1456 aa28.73■■■□□ 2.19
NXT1-201ENST00000254998 RNMTO43148 476 aaKnown RBP28.73■■■□□ 2.19
NXT1-201ENST00000254998 CABP4P57796 275 aa28.73■■■□□ 2.19
NXT1-201ENST00000254998 R3HDM1Q15032 1099 aaKnown RBP28.72■■■□□ 2.19
NXT1-201ENST00000254998 PNNQ9H307 717 aaKnown RBP28.72■■■□□ 2.19
NXT1-201ENST00000254998 ANO8Q9HCE9 1232 aaPredicted RBP28.72■■■□□ 2.19
NXT1-201ENST00000254998 GNAT3A8MTJ3 354 aa28.71■■■□□ 2.19
NXT1-201ENST00000254998 PLEKHF1Q96S99 279 aa28.71■■■□□ 2.19
NXT1-201ENST00000254998 LGR6Q9HBX8 967 aa28.71■■■□□ 2.19
NXT1-201ENST00000254998 ATG3Q9NT62 314 aa28.7■■■□□ 2.18
NXT1-201ENST00000254998 CCNL1Q9UK58 526 aaPredicted RBP28.7■■■□□ 2.18
NXT1-201ENST00000254998 ASAP1Q9ULH1 1129 aa28.7■■■□□ 2.18
NXT1-201ENST00000254998 PSDA5PKW4 1024 aaPredicted RBP28.69■■■□□ 2.18
NXT1-201ENST00000254998 ANP32CO43423 234 aa28.69■■■□□ 2.18
NXT1-201ENST00000254998 HMGB2P26583 209 aaKnown RBP28.69■■■□□ 2.18
NXT1-201ENST00000254998 SLC52A2Q9HAB3 445 aa28.69■■■□□ 2.18
NXT1-201ENST00000254998 VIRMAQ69YN4 1812 aaKnown RBP28.69■■■□□ 2.18
NXT1-201ENST00000254998 NFATC2IPQ8NCF5 419 aa28.68■■■□□ 2.18
NXT1-201ENST00000254998 STK32BQ9NY57 414 aa28.68■■■□□ 2.18
NXT1-201ENST00000254998 NEFMP07197 916 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms