RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 PLCD3Q8N3E9 789 aa16.97■□□□□ 0.31
ZC3H4-201ENST00000253048 PPP1R42Q7Z4L9 355 aa16.97■□□□□ 0.31
ZC3H4-201ENST00000253048 USHBP1Q8N6Y0 703 aa16.97■□□□□ 0.31
ZC3H4-201ENST00000253048 STK32BQ9NY57 414 aa16.97■□□□□ 0.31
ZC3H4-201ENST00000253048 ANKRD30BQ9BXX2 1392 aa16.97■□□□□ 0.31
ZC3H4-201ENST00000253048 WAPLQ7Z5K2 1190 aa16.96■□□□□ 0.31
ZC3H4-201ENST00000253048 ZNF444Q8N0Y2 327 aaPredicted RBP16.96■□□□□ 0.31
ZC3H4-201ENST00000253048 EXOSC9Q06265 439 aaKnown RBP16.96■□□□□ 0.31
ZC3H4-201ENST00000253048 NBPF6Q5VWK0 638 aa16.96■□□□□ 0.31
ZC3H4-201ENST00000253048 NBPF5PQ86XG9 351 aaPredicted RBP16.96■□□□□ 0.31
ZC3H4-201ENST00000253048 CAGE1Q8TC20 777 aa16.96■□□□□ 0.31
ZC3H4-201ENST00000253048 NBPF4Q96M43 638 aa16.96■□□□□ 0.31
ZC3H4-201ENST00000253048 CDKL5O76039 1030 aa16.96■□□□□ 0.31
ZC3H4-201ENST00000253048 ANKRD18BA2A2Z9 1011 aa16.95■□□□□ 0.3
ZC3H4-201ENST00000253048 DEKP35659 375 aaKnown RBP16.95■□□□□ 0.3
ZC3H4-201ENST00000253048 IFIT5Q13325 482 aaKnown RBP16.95■□□□□ 0.3
ZC3H4-201ENST00000253048 ACSBG1Q96GR2 724 aa16.95■□□□□ 0.3
ZC3H4-201ENST00000253048 MYD88Q99836 296 aa16.95■□□□□ 0.3
ZC3H4-201ENST00000253048 ADGRL1O94910 1474 aa16.95■□□□□ 0.3
ZC3H4-201ENST00000253048 JDP2Q8WYK2 163 aa16.95■□□□□ 0.3
ZC3H4-201ENST00000253048 STK38Q15208 465 aa16.95■□□□□ 0.3
ZC3H4-201ENST00000253048 EXOC6Q8TAG9 804 aa16.95■□□□□ 0.3
ZC3H4-201ENST00000253048 LRRCC1Q9C099 1032 aa16.95■□□□□ 0.3
ZC3H4-201ENST00000253048 JMYQ8N9B5 988 aa16.95■□□□□ 0.3
ZC3H4-201ENST00000253048 CDC5LQ99459 802 aaKnown RBP16.95■□□□□ 0.3
ZC3H4-201ENST00000253048 WWC3Q9ULE0 1092 aa16.94■□□□□ 0.3
ZC3H4-201ENST00000253048 HLA-DOAP06340 250 aa16.94■□□□□ 0.3
ZC3H4-201ENST00000253048 SMARCE1Q969G3 411 aa16.94■□□□□ 0.3
ZC3H4-201ENST00000253048 SEPT11Q9NVA2 429 aaKnown RBP16.94■□□□□ 0.3
ZC3H4-201ENST00000253048 OGFOD1Q8N543 542 aa16.94■□□□□ 0.3
ZC3H4-201ENST00000253048 POTEJP0CG39 1038 aa16.93■□□□□ 0.3
ZC3H4-201ENST00000253048 LARP1Q6PKG0 1096 aaKnown RBP16.93■□□□□ 0.3
ZC3H4-201ENST00000253048 TROQ12816 1431 aaPredicted RBP16.93■□□□□ 0.3
ZC3H4-201ENST00000253048 AAMPQ13685 434 aa16.93■□□□□ 0.3
ZC3H4-201ENST00000253048 FMNL2Q96PY5 1086 aa16.93■□□□□ 0.3
ZC3H4-201ENST00000253048 DENND4BO75064 1496 aaPredicted RBP16.93■□□□□ 0.3
ZC3H4-201ENST00000253048 MINDY4BA8MYZ0 360 aa16.93■□□□□ 0.3
ZC3H4-201ENST00000253048 BRPF1P55201 1214 aaPredicted RBP16.93■□□□□ 0.3
ZC3H4-201ENST00000253048 SMARCC1Q92922 1105 aaPredicted RBP16.93■□□□□ 0.3
ZC3H4-201ENST00000253048 HECW1Q76N89 1606 aa16.93■□□□□ 0.3
ZC3H4-201ENST00000253048 MAP4K4O95819 1239 aaPredicted RBP16.92■□□□□ 0.3
ZC3H4-201ENST00000253048 GPTP24298 496 aa16.92■□□□□ 0.3
ZC3H4-201ENST00000253048 MAP3K9P80192 1104 aa16.92■□□□□ 0.3
ZC3H4-201ENST00000253048 PANK1Q8TE04 598 aa16.92■□□□□ 0.3
ZC3H4-201ENST00000253048 SRGAP3O43295 1099 aa16.92■□□□□ 0.3
ZC3H4-201ENST00000253048 LDHCP07864 332 aa16.92■□□□□ 0.3
ZC3H4-201ENST00000253048 C1orf115Q9H7X2 142 aa16.92■□□□□ 0.3
ZC3H4-201ENST00000253048 SYNJ1O43426 1573 aa16.92■□□□□ 0.3
ZC3H4-201ENST00000253048 DDB1Q16531 1140 aa16.91■□□□□ 0.3
ZC3H4-201ENST00000253048 TOPBP1Q92547 1522 aa16.91■□□□□ 0.3
ZC3H4-201ENST00000253048 ATP6V1AP38606 617 aa16.91■□□□□ 0.3
ZC3H4-201ENST00000253048 WASF1Q92558 559 aa16.91■□□□□ 0.3
ZC3H4-201ENST00000253048 TEX14Q8IWB6 1497 aa16.91■□□□□ 0.3
ZC3H4-201ENST00000253048 MAP3K12Q12852 859 aa16.91■□□□□ 0.3
ZC3H4-201ENST00000253048 SETDB2Q96T68 719 aa16.91■□□□□ 0.3
ZC3H4-201ENST00000253048 FAM135AQ9P2D6 1515 aa16.91■□□□□ 0.3
ZC3H4-201ENST00000253048 ANKRD1Q15327 319 aa16.9■□□□□ 0.3
ZC3H4-201ENST00000253048 CHRNA2Q15822 529 aa16.9■□□□□ 0.3
ZC3H4-201ENST00000253048 IFNL2Q8IZJ0 200 aa16.9■□□□□ 0.3
ZC3H4-201ENST00000253048 KINO60870 393 aaKnown RBP16.9■□□□□ 0.3
ZC3H4-201ENST00000253048 PPP2R1AP30153 589 aa16.9■□□□□ 0.3
ZC3H4-201ENST00000253048 IMMTQ16891 758 aaKnown RBP16.9■□□□□ 0.3
ZC3H4-201ENST00000253048 TTLL5Q6EMB2 1281 aa16.9■□□□□ 0.3
ZC3H4-201ENST00000253048 FAM13BQ9NYF5 915 aa16.9■□□□□ 0.3
ZC3H4-201ENST00000253048 NOB1Q9ULX3 412 aaKnown RBP16.9■□□□□ 0.3
ZC3H4-201ENST00000253048 NUCB2P80303 420 aa16.9■□□□□ 0.3
ZC3H4-201ENST00000253048 STK3Q13188 491 aa16.9■□□□□ 0.3
ZC3H4-201ENST00000253048 FBXO31Q5XUX0 539 aaPredicted RBP16.9■□□□□ 0.3
ZC3H4-201ENST00000253048 CCDC150Q8NCX0 1101 aa16.9■□□□□ 0.3
ZC3H4-201ENST00000253048 NPHP3Q7Z494 1330 aa16.9■□□□□ 0.3
ZC3H4-201ENST00000253048 ZNHIT6Q9NWK9 470 aaKnown RBP16.89■□□□□ 0.3
ZC3H4-201ENST00000253048 PDCP20941 246 aa16.89■□□□□ 0.29
ZC3H4-201ENST00000253048 ANKRD18AQ8IVF6 992 aa16.89■□□□□ 0.29
ZC3H4-201ENST00000253048 CYP46A1Q9Y6A2 500 aa16.89■□□□□ 0.29
ZC3H4-201ENST00000253048 CCDC7Q96M83 1385 aa16.89■□□□□ 0.29
ZC3H4-201ENST00000253048 SPTY2D1Q68D10 685 aaPredicted RBP16.89■□□□□ 0.29
ZC3H4-201ENST00000253048 ZNF710Q8N1W2 664 aa16.89■□□□□ 0.29
ZC3H4-201ENST00000253048 LUC7LQ9NQ29 371 aaKnown RBP16.89■□□□□ 0.29
ZC3H4-201ENST00000253048 TNRQ92752 1358 aa16.89■□□□□ 0.29
ZC3H4-201ENST00000253048 RFX1P22670 979 aa16.88■□□□□ 0.29
ZC3H4-201ENST00000253048 DAPK1P53355 1430 aa16.88■□□□□ 0.29
ZC3H4-201ENST00000253048 RBM26Q5T8P6 1007 aaKnown RBP16.88■□□□□ 0.29
ZC3H4-201ENST00000253048 BAG3O95817 575 aa16.88■□□□□ 0.29
ZC3H4-201ENST00000253048 LIG1P18858 919 aa16.88■□□□□ 0.29
ZC3H4-201ENST00000253048 ZRSR2Q15696 482 aaKnown RBP16.88■□□□□ 0.29
ZC3H4-201ENST00000253048 PPP1R12BO60237 982 aaPredicted RBP16.88■□□□□ 0.29
ZC3H4-201ENST00000253048 EHBP1L1Q8N3D4 1523 aa16.87■□□□□ 0.29
ZC3H4-201ENST00000253048 LRRC9Q6ZRR7 1453 aa16.87■□□□□ 0.29
ZC3H4-201ENST00000253048 KIF7Q2M1P5 1343 aa16.87■□□□□ 0.29
ZC3H4-201ENST00000253048 NEFHP12036 1026 aa16.87■□□□□ 0.29
ZC3H4-201ENST00000253048 HSPA2P54652 639 aa16.87■□□□□ 0.29
ZC3H4-201ENST00000253048 CEBPZQ03701 1054 aaKnown RBP16.87■□□□□ 0.29
ZC3H4-201ENST00000253048 DACH1Q9UI36 760 aa16.87■□□□□ 0.29
ZC3H4-201ENST00000253048 TSR2Q969E8 191 aaKnown RBP16.87■□□□□ 0.29
ZC3H4-201ENST00000253048 ADAMTS8Q9UP79 889 aa16.87■□□□□ 0.29
ZC3H4-201ENST00000253048 ECM2O94769 699 aaPredicted RBP16.87■□□□□ 0.29
ZC3H4-201ENST00000253048 DEF6Q9H4E7 631 aa16.87■□□□□ 0.29
ZC3H4-201ENST00000253048 SSR1P43307 286 aaKnown RBP16.86■□□□□ 0.29
ZC3H4-201ENST00000253048 GSTO1P78417 241 aa16.86■□□□□ 0.29
ZC3H4-201ENST00000253048 GCC1Q96CN9 775 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms