RNA–Protein interactions for RNA: ENST00000252456.6

CNN1-201, Transcript of calponin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-201ENST00000252456 ZCRB1Q8TBF4 217 aaKnown RBP19.33■□□□□ 0.69
CNN1-201ENST00000252456 RREB1Q92766 1687 aa19.33■□□□□ 0.69
CNN1-201ENST00000252456 RGPD3A6NKT7 1758 aaPredicted RBP19.33■□□□□ 0.69
CNN1-201ENST00000252456 RGPD4Q7Z3J3 1758 aa19.33■□□□□ 0.69
CNN1-201ENST00000252456 DOT1LQ8TEK3 1739 aa19.33■□□□□ 0.68
CNN1-201ENST00000252456 BAG6P46379 1132 aa19.33■□□□□ 0.68
CNN1-201ENST00000252456 TATP17735 454 aaPredicted RBP19.32■□□□□ 0.68
CNN1-201ENST00000252456 IL13P35225 146 aa19.32■□□□□ 0.68
CNN1-201ENST00000252456 EN1Q05925 392 aaPredicted RBP19.32■□□□□ 0.68
CNN1-201ENST00000252456 DDX54Q8TDD1 881 aaKnown RBP19.31■□□□□ 0.68
CNN1-201ENST00000252456 BCL11BQ9C0K0 894 aaPredicted RBP19.3■□□□□ 0.68
CNN1-201ENST00000252456 BTAF1O14981 1849 aa19.3■□□□□ 0.68
CNN1-201ENST00000252456 KDRP35968 1356 aa19.29■□□□□ 0.68
CNN1-201ENST00000252456 KCNQ2O43526 872 aa19.29■□□□□ 0.68
CNN1-201ENST00000252456 APBA3O96018 575 aa19.29■□□□□ 0.68
CNN1-201ENST00000252456 CAMKK2Q96RR4 588 aa19.29■□□□□ 0.68
CNN1-201ENST00000252456 KAT6BQ8WYB5 2073 aa19.29■□□□□ 0.68
CNN1-201ENST00000252456 NUP188Q5SRE5 1749 aa19.29■□□□□ 0.68
CNN1-201ENST00000252456 TOGARAM1Q9Y4F4 1720 aa19.29■□□□□ 0.68
CNN1-201ENST00000252456 DDX10Q13206 875 aaKnown RBP19.29■□□□□ 0.68
CNN1-201ENST00000252456 PARD3Q8TEW0 1356 aa19.28■□□□□ 0.68
CNN1-201ENST00000252456 PLEKHG2Q9H7P9 1386 aa19.28■□□□□ 0.68
CNN1-201ENST00000252456 EZH2Q15910 746 aaKnown RBP19.28■□□□□ 0.68
CNN1-201ENST00000252456 AEBP1Q8IUX7 1158 aa19.28■□□□□ 0.68
CNN1-201ENST00000252456 CYP27B1O15528 508 aa19.27■□□□□ 0.68
CNN1-201ENST00000252456 ACSBG1Q96GR2 724 aa19.27■□□□□ 0.68
CNN1-201ENST00000252456 PCDH11XQ9BZA7 1347 aa19.27■□□□□ 0.68
CNN1-201ENST00000252456 PCDH11YQ9BZA8 1340 aa19.27■□□□□ 0.68
CNN1-201ENST00000252456 PPP2R1AP30153 589 aa19.26■□□□□ 0.67
CNN1-201ENST00000252456 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.25■□□□□ 0.67
CNN1-201ENST00000252456 ITGB4P16144 1822 aa19.23■□□□□ 0.67
CNN1-201ENST00000252456 PLSCR1O15162 318 aa19.23■□□□□ 0.67
CNN1-201ENST00000252456 DIAPH1O60610 1272 aaKnown RBP19.23■□□□□ 0.67
CNN1-201ENST00000252456 SULT6B1Q6IMI4 303 aa19.23■□□□□ 0.67
CNN1-201ENST00000252456 SPG7Q9UQ90 795 aa19.22■□□□□ 0.67
CNN1-201ENST00000252456 SRCAPQ6ZRS2 3230 aa19.21■□□□□ 0.67
CNN1-201ENST00000252456 PROM2Q8N271 834 aa19.21■□□□□ 0.67
CNN1-201ENST00000252456 PRIM1P49642 420 aaKnown RBP19.2■□□□□ 0.66
CNN1-201ENST00000252456 NKX1-1Q15270 411 aaPredicted RBP19.2■□□□□ 0.66
CNN1-201ENST00000252456 PHKG2P15735 406 aa19.19■□□□□ 0.66
CNN1-201ENST00000252456 LY75O60449 1722 aa19.19■□□□□ 0.66
CNN1-201ENST00000252456 HMOX1P09601 288 aa19.18■□□□□ 0.66
CNN1-201ENST00000252456 IFNL2Q8IZJ0 200 aa19.17■□□□□ 0.66
CNN1-201ENST00000252456 SYTL4Q96C24 671 aaPredicted RBP19.17■□□□□ 0.66
CNN1-201ENST00000252456 PAPPAQ13219 1627 aa19.16■□□□□ 0.66
CNN1-201ENST00000252456 PLEKHO1Q53GL0 409 aaPredicted RBP19.16■□□□□ 0.66
CNN1-201ENST00000252456 VIRMAQ69YN4 1812 aaKnown RBP19.15■□□□□ 0.66
CNN1-201ENST00000252456 TXNRD1Q16881 649 aa19.15■□□□□ 0.66
CNN1-201ENST00000252456 AMOTQ4VCS5 1084 aa19.15■□□□□ 0.66
CNN1-201ENST00000252456 CFAP53Q96M91 514 aa19.15■□□□□ 0.66
CNN1-201ENST00000252456 KDM6AO15550 1401 aaPredicted RBP19.15■□□□□ 0.66
CNN1-201ENST00000252456 ZNF316A6NFI3 1004 aaPredicted RBP19.14■□□□□ 0.66
CNN1-201ENST00000252456 RALBP1Q15311 655 aa19.14■□□□□ 0.66
CNN1-201ENST00000252456 SCN11AQ9UI33 1791 aa19.14■□□□□ 0.65
CNN1-201ENST00000252456 U2SURPO15042 1029 aaKnown RBP19.14■□□□□ 0.65
CNN1-201ENST00000252456 ZNF530Q6P9A1 599 aaPredicted RBP19.14■□□□□ 0.65
CNN1-201ENST00000252456 ADAMTS7Q9UKP4 1686 aa19.12■□□□□ 0.65
CNN1-201ENST00000252456 ANO8Q9HCE9 1232 aaPredicted RBP19.12■□□□□ 0.65
CNN1-201ENST00000252456 PSDA5PKW4 1024 aaPredicted RBP19.11■□□□□ 0.65
CNN1-201ENST00000252456 MPRIPQ6WCQ1 1025 aa19.11■□□□□ 0.65
CNN1-201ENST00000252456 RSPH6AQ9H0K4 717 aa19.11■□□□□ 0.65
CNN1-201ENST00000252456 LRRC4BQ9NT99 713 aa19.11■□□□□ 0.65
CNN1-201ENST00000252456 R3HDM1Q15032 1099 aaKnown RBP19.1■□□□□ 0.65
CNN1-201ENST00000252456 PIGBQ92521 554 aa19.1■□□□□ 0.65
CNN1-201ENST00000252456 DCAF5Q96JK2 942 aa19.1■□□□□ 0.65
CNN1-201ENST00000252456 MTHFSDQ2M296 383 aaKnown RBP19.09■□□□□ 0.65
CNN1-201ENST00000252456 PRKRIP1Q9H875 184 aaPredicted RBP19.08■□□□□ 0.65
CNN1-201ENST00000252456 NUDCQ9Y266 331 aa19.08■□□□□ 0.65
CNN1-201ENST00000252456 MYBBP1AQ9BQG0 1328 aaKnown RBP19.08■□□□□ 0.64
CNN1-201ENST00000252456 TAF1LQ8IZX4 1826 aa19.08■□□□□ 0.64
CNN1-201ENST00000252456 HSP90AB1P08238 724 aaKnown RBP19.07■□□□□ 0.64
CNN1-201ENST00000252456 C1orf141Q5JVX7 400 aa19.07■□□□□ 0.64
CNN1-201ENST00000252456 CASZ1Q86V15 1759 aa19.07■□□□□ 0.64
CNN1-201ENST00000252456 U2AF1L5P0DN76 240 aaPredicted RBP19.07■□□□□ 0.64
CNN1-201ENST00000252456 U2AF1Q01081 240 aaKnown RBP eCLIP19.07■□□□□ 0.64
CNN1-201ENST00000252456 PALLDQ8WX93 1383 aa19.06■□□□□ 0.64
CNN1-201ENST00000252456 ERVV-2B6SEH9 535 aa19.06■□□□□ 0.64
CNN1-201ENST00000252456 PRKAR2BP31323 418 aa19.06■□□□□ 0.64
CNN1-201ENST00000252456 KCNQ4P56696 695 aa19.06■□□□□ 0.64
CNN1-201ENST00000252456 AKAP4Q5JQC9 854 aa19.06■□□□□ 0.64
CNN1-201ENST00000252456 NBPF14Q5TI25 921 aa19.06■□□□□ 0.64
CNN1-201ENST00000252456 PHACTR3Q96KR7 559 aa19.06■□□□□ 0.64
CNN1-201ENST00000252456 TMOD3Q9NYL9 352 aa19.06■□□□□ 0.64
CNN1-201ENST00000252456 MRC1P22897 1456 aa19.06■□□□□ 0.64
CNN1-201ENST00000252456 C5P01031 1676 aa19.06■□□□□ 0.64
CNN1-201ENST00000252456 TUBGCP6Q96RT7 1819 aa19.05■□□□□ 0.64
CNN1-201ENST00000252456 SLC27A3Q5K4L6 730 aa19.05■□□□□ 0.64
CNN1-201ENST00000252456 FCHSD2O94868 740 aa19.03■□□□□ 0.64
CNN1-201ENST00000252456 ASAP1Q9ULH1 1129 aa19.03■□□□□ 0.64
CNN1-201ENST00000252456 QSER1Q2KHR3 1735 aa19.03■□□□□ 0.64
CNN1-201ENST00000252456 ZNF827Q17R98 1081 aa19.03■□□□□ 0.64
CNN1-201ENST00000252456 LGR6Q9HBX8 967 aa19.03■□□□□ 0.64
CNN1-201ENST00000252456 LRP5O75197 1615 aa19.02■□□□□ 0.64
CNN1-201ENST00000252456 SIPA1L3O60292 1781 aaPredicted RBP19.02■□□□□ 0.64
CNN1-201ENST00000252456 SLC15A2Q16348 729 aa19.02■□□□□ 0.64
CNN1-201ENST00000252456 ATG3Q9NT62 314 aa19.02■□□□□ 0.64
CNN1-201ENST00000252456 CCNL1Q9UK58 526 aaPredicted RBP19.02■□□□□ 0.64
CNN1-201ENST00000252456 SMARCC1Q92922 1105 aaPredicted RBP19.01■□□□□ 0.63
CNN1-201ENST00000252456 MAP3K5Q99683 1374 aa19.01■□□□□ 0.63
CNN1-201ENST00000252456 ZNF831Q5JPB2 1677 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms