RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 SEC24BO95487 1268 aa31.84■■■□□ 2.69
TMEM55B-201ENST00000250489 GAS2L2Q8NHY3 880 aa31.84■■■□□ 2.69
TMEM55B-201ENST00000250489 RTL1A6NKG5 1358 aa31.83■■■□□ 2.69
TMEM55B-201ENST00000250489 RTF1Q92541 710 aaKnown RBP31.83■■■□□ 2.69
TMEM55B-201ENST00000250489 C14orf37Q86TY3 774 aa31.81■■■□□ 2.68
TMEM55B-201ENST00000250489 LTN1O94822 1766 aa31.79■■■□□ 2.68
TMEM55B-201ENST00000250489 NBR1Q14596 966 aa31.79■■■□□ 2.68
TMEM55B-201ENST00000250489 ESCO1Q5FWF5 840 aa31.78■■■□□ 2.68
TMEM55B-201ENST00000250489 NFAT5O94916 1531 aa31.78■■■□□ 2.68
TMEM55B-201ENST00000250489 LRRC37A3O60309 1634 aa31.78■■■□□ 2.68
TMEM55B-201ENST00000250489 NUCB1Q02818 461 aa31.77■■■□□ 2.68
TMEM55B-201ENST00000250489 HTATSF1O43719 755 aaKnown RBP31.77■■■□□ 2.68
TMEM55B-201ENST00000250489 RGS12O14924 1447 aa31.76■■■□□ 2.68
TMEM55B-201ENST00000250489 C1orf115Q9H7X2 142 aa31.76■■■□□ 2.67
TMEM55B-201ENST00000250489 PSME1Q06323 249 aa31.75■■■□□ 2.67
TMEM55B-201ENST00000250489 MIS18AQ9NYP9 233 aa31.74■■■□□ 2.67
TMEM55B-201ENST00000250489 TSPYL4Q9UJ04 414 aa31.74■■■□□ 2.67
TMEM55B-201ENST00000250489 INTS3Q68E01 1043 aaKnown RBP31.73■■■□□ 2.67
TMEM55B-201ENST00000250489 LTV1Q96GA3 475 aaPredicted RBP31.73■■■□□ 2.67
TMEM55B-201ENST00000250489 IP6K1Q92551 441 aa31.72■■■□□ 2.67
TMEM55B-201ENST00000250489 SLC4A3P48751 1232 aa31.71■■■□□ 2.67
TMEM55B-201ENST00000250489 GCC1Q96CN9 775 aa31.71■■■□□ 2.67
TMEM55B-201ENST00000250489 DAXXQ9UER7 740 aaPredicted RBP31.71■■■□□ 2.67
TMEM55B-201ENST00000250489 PTPRCP08575 1304 aa31.71■■■□□ 2.67
TMEM55B-201ENST00000250489 GNAT3A8MTJ3 354 aa31.7■■■□□ 2.67
TMEM55B-201ENST00000250489 CHD1LQ86WJ1 897 aa31.7■■■□□ 2.67
TMEM55B-201ENST00000250489 SIRT2Q8IXJ6 389 aa31.7■■■□□ 2.67
TMEM55B-201ENST00000250489 MAP3K5Q99683 1374 aa31.68■■■□□ 2.66
TMEM55B-201ENST00000250489 PHRF1Q9P1Y6 1649 aaKnown RBP31.68■■■□□ 2.66
TMEM55B-201ENST00000250489 KCNH5Q8NCM2 988 aa31.67■■■□□ 2.66
TMEM55B-201ENST00000250489 LNPKQ9C0E8 428 aa31.67■■■□□ 2.66
TMEM55B-201ENST00000250489 UPF2Q9HAU5 1272 aaKnown RBP31.67■■■□□ 2.66
TMEM55B-201ENST00000250489 MSH6P52701 1360 aa31.67■■■□□ 2.66
TMEM55B-201ENST00000250489 ORAI2Q96SN7 254 aa31.66■■■□□ 2.66
TMEM55B-201ENST00000250489 TBC1D32Q96NH3 1257 aa31.65■■■□□ 2.66
TMEM55B-201ENST00000250489 SLC4A2P04920 1241 aa31.64■■■□□ 2.66
TMEM55B-201ENST00000250489 USHBP1Q8N6Y0 703 aa31.64■■■□□ 2.66
TMEM55B-201ENST00000250489 ANKRD45Q5TZF3 282 aa31.62■■■□□ 2.65
TMEM55B-201ENST00000250489 IL17REQ8NFR9 667 aa31.62■■■□□ 2.65
TMEM55B-201ENST00000250489 SLIT3O75094 1523 aa31.61■■■□□ 2.65
TMEM55B-201ENST00000250489 PROSER2Q86WR7 435 aaPredicted RBP31.6■■■□□ 2.65
TMEM55B-201ENST00000250489 NBPF6Q5VWK0 638 aa31.59■■■□□ 2.65
TMEM55B-201ENST00000250489 NBPF4Q96M43 638 aa31.59■■■□□ 2.65
TMEM55B-201ENST00000250489 BABAM1Q9NWV8 329 aa31.59■■■□□ 2.65
TMEM55B-201ENST00000250489 ATP10DQ9P241 1426 aa31.58■■■□□ 2.65
TMEM55B-201ENST00000250489 TRPM3Q9HCF6 1732 aaPredicted RBP31.58■■■□□ 2.65
TMEM55B-201ENST00000250489 RTL5Q5HYW3 569 aaPredicted RBP31.58■■■□□ 2.65
TMEM55B-201ENST00000250489 XPCQ01831 940 aaPredicted RBP31.57■■■□□ 2.64
TMEM55B-201ENST00000250489 G2E3Q7L622 706 aa31.57■■■□□ 2.64
TMEM55B-201ENST00000250489 FAM208AQ9UK61 1670 aaKnown RBP31.57■■■□□ 2.64
TMEM55B-201ENST00000250489 KIF1AQ12756 1690 aa31.56■■■□□ 2.64
TMEM55B-201ENST00000250489 TAF7Q15545 349 aaPredicted RBP31.56■■■□□ 2.64
TMEM55B-201ENST00000250489 C1orf167Q5SNV9 1468 aa31.55■■■□□ 2.64
TMEM55B-201ENST00000250489 ZBTB7CA1YPR0 619 aa31.55■■■□□ 2.64
TMEM55B-201ENST00000250489 ANKRD44Q8N8A2 993 aa31.55■■■□□ 2.64
TMEM55B-201ENST00000250489 SOS1Q07889 1333 aaPredicted RBP31.55■■■□□ 2.64
TMEM55B-201ENST00000250489 GCP02774 474 aa31.54■■■□□ 2.64
TMEM55B-201ENST00000250489 RGPD2P0DJD1 1756 aa31.54■■■□□ 2.64
TMEM55B-201ENST00000250489 ARHGEF25Q86VW2 580 aa31.54■■■□□ 2.64
TMEM55B-201ENST00000250489 BMP2KLQ5H9B9 411 aa31.53■■■□□ 2.64
TMEM55B-201ENST00000250489 STK31Q9BXU1 1019 aa31.53■■■□□ 2.64
TMEM55B-201ENST00000250489 DCTPP1Q9H773 170 aa31.53■■■□□ 2.64
TMEM55B-201ENST00000250489 CEMIPQ8WUJ3 1361 aa31.52■■■□□ 2.64
TMEM55B-201ENST00000250489 RPAP2Q8IXW5 612 aaPredicted RBP31.52■■■□□ 2.64
TMEM55B-201ENST00000250489 BECN1Q14457 450 aa31.52■■■□□ 2.64
TMEM55B-201ENST00000250489 C19orf44Q9H6X5 657 aa31.52■■■□□ 2.64
TMEM55B-201ENST00000250489 CCDC30Q5VVM6 783 aa31.51■■■□□ 2.63
TMEM55B-201ENST00000250489 MEIS3Q99687 375 aa31.51■■■□□ 2.63
TMEM55B-201ENST00000250489 MED1Q15648 1581 aaPredicted RBP31.51■■■□□ 2.63
TMEM55B-201ENST00000250489 CEP85Q6P2H3 762 aa31.5■■■□□ 2.63
TMEM55B-201ENST00000250489 KRT28Q7Z3Y7 464 aa31.5■■■□□ 2.63
TMEM55B-201ENST00000250489 USP35Q9P2H5 1018 aa31.5■■■□□ 2.63
TMEM55B-201ENST00000250489 MFAP1P55081 439 aaKnown RBP31.5■■■□□ 2.63
TMEM55B-201ENST00000250489 NCAPD2Q15021 1401 aa31.49■■■□□ 2.63
TMEM55B-201ENST00000250489 CCT4P50991 539 aaKnown RBP31.49■■■□□ 2.63
TMEM55B-201ENST00000250489 LRRC59Q96AG4 307 aaKnown RBP31.49■■■□□ 2.63
TMEM55B-201ENST00000250489 F6X3S4 739 aa31.48■■■□□ 2.63
TMEM55B-201ENST00000250489 C22orf23Q9BZE7 217 aa31.48■■■□□ 2.63
TMEM55B-201ENST00000250489 LMO7Q8WWI1 1683 aa31.47■■■□□ 2.63
TMEM55B-201ENST00000250489 MST1RQ04912 1400 aa31.47■■■□□ 2.63
TMEM55B-201ENST00000250489 LMOD2Q6P5Q4 547 aa31.47■■■□□ 2.63
TMEM55B-201ENST00000250489 SLC4A10Q6U841 1118 aa31.46■■■□□ 2.63
TMEM55B-201ENST00000250489 FLIIQ13045 1269 aa31.45■■■□□ 2.63
TMEM55B-201ENST00000250489 CACNA1FO60840 1977 aa31.44■■■□□ 2.62
TMEM55B-201ENST00000250489 CAMTA1Q9Y6Y1 1673 aa31.44■■■□□ 2.62
TMEM55B-201ENST00000250489 PLEKHG5O94827 1062 aa31.43■■■□□ 2.62
TMEM55B-201ENST00000250489 ALS2Q96Q42 1657 aa31.43■■■□□ 2.62
TMEM55B-201ENST00000250489 PLEKHO1Q53GL0 409 aaPredicted RBP31.42■■■□□ 2.62
TMEM55B-201ENST00000250489 ANKRD24Q8TF21 1146 aa31.42■■■□□ 2.62
TMEM55B-201ENST00000250489 LGR6Q9HBX8 967 aa31.42■■■□□ 2.62
TMEM55B-201ENST00000250489 AKAP4Q5JQC9 854 aa31.41■■■□□ 2.62
TMEM55B-201ENST00000250489 NECTIN2Q92692 538 aa31.41■■■□□ 2.62
TMEM55B-201ENST00000250489 KDM3BQ7LBC6 1761 aa31.41■■■□□ 2.62
TMEM55B-201ENST00000250489 STRCP1A6NGW2 1772 aa31.4■■■□□ 2.62
TMEM55B-201ENST00000250489 FKBP5Q13451 457 aaPredicted RBP31.4■■■□□ 2.62
TMEM55B-201ENST00000250489 ZNF530Q6P9A1 599 aaPredicted RBP31.4■■■□□ 2.62
TMEM55B-201ENST00000250489 TMEM94Q12767 1356 aa31.4■■■□□ 2.62
TMEM55B-201ENST00000250489 N4BP2Q86UW6 1770 aaPredicted RBP31.39■■■□□ 2.62
TMEM55B-201ENST00000250489 AMOTQ4VCS5 1084 aa31.39■■■□□ 2.62
TMEM55B-201ENST00000250489 PLEKHM2Q8IWE5 1019 aa31.39■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms