RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 WWC3Q9ULE0 1092 aa17.32■□□□□ 0.36
RFPL3-201ENST00000249007 EVC2Q86UK5 1308 aa17.32■□□□□ 0.36
RFPL3-201ENST00000249007 TOMM70O94826 608 aa17.31■□□□□ 0.36
RFPL3-201ENST00000249007 DOT1LQ8TEK3 1739 aa17.3■□□□□ 0.36
RFPL3-201ENST00000249007 IGSF1Q8N6C5 1336 aa17.3■□□□□ 0.36
RFPL3-201ENST00000249007 NSD2O96028 1365 aa17.3■□□□□ 0.36
RFPL3-201ENST00000249007 LTN1O94822 1766 aa17.29■□□□□ 0.36
RFPL3-201ENST00000249007 KTN1Q86UP2 1357 aaKnown RBP17.29■□□□□ 0.36
RFPL3-201ENST00000249007 TNS4Q8IZW8 715 aa17.29■□□□□ 0.36
RFPL3-201ENST00000249007 PRELPP51888 382 aa17.28■□□□□ 0.36
RFPL3-201ENST00000249007 USP47Q96K76 1375 aa17.27■□□□□ 0.36
RFPL3-201ENST00000249007 FLAD1Q8NFF5 587 aa17.27■□□□□ 0.36
RFPL3-201ENST00000249007 WDR90Q96KV7 1748 aa17.26■□□□□ 0.35
RFPL3-201ENST00000249007 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.26■□□□□ 0.35
RFPL3-201ENST00000249007 KLRG1Q96E93 195 aa17.26■□□□□ 0.35
RFPL3-201ENST00000249007 USP31Q70CQ4 1352 aa17.26■□□□□ 0.35
RFPL3-201ENST00000249007 JMYQ8N9B5 988 aa17.24■□□□□ 0.35
RFPL3-201ENST00000249007 C5P01031 1676 aa17.24■□□□□ 0.35
RFPL3-201ENST00000249007 HTRA3P83110 453 aa17.23■□□□□ 0.35
RFPL3-201ENST00000249007 NME9Q86XW9 330 aa17.23■□□□□ 0.35
RFPL3-201ENST00000249007 CICQ96RK0 1608 aaPredicted RBP17.23■□□□□ 0.35
RFPL3-201ENST00000249007 USP54Q70EL1 1684 aa17.23■□□□□ 0.35
RFPL3-201ENST00000249007 MON2Q7Z3U7 1717 aa17.23■□□□□ 0.35
RFPL3-201ENST00000249007 HMGB2P26583 209 aaKnown RBP17.22■□□□□ 0.35
RFPL3-201ENST00000249007 NMRK2Q9NPI5 230 aa17.22■□□□□ 0.35
RFPL3-201ENST00000249007 FAM208AQ9UK61 1670 aaKnown RBP17.21■□□□□ 0.35
RFPL3-201ENST00000249007 LTV1Q96GA3 475 aaPredicted RBP17.21■□□□□ 0.35
RFPL3-201ENST00000249007 ZCRB1Q8TBF4 217 aaKnown RBP17.2■□□□□ 0.34
RFPL3-201ENST00000249007 RBM46Q8TBY0 533 aaKnown RBP17.2■□□□□ 0.34
RFPL3-201ENST00000249007 IP6K1Q92551 441 aa17.18■□□□□ 0.34
RFPL3-201ENST00000249007 SBNO2Q9Y2G9 1366 aa17.18■□□□□ 0.34
RFPL3-201ENST00000249007 C16orf71Q8IYS4 520 aaPredicted RBP17.18■□□□□ 0.34
RFPL3-201ENST00000249007 AK7Q96M32 723 aa17.18■□□□□ 0.34
RFPL3-201ENST00000249007 TAF1LQ8IZX4 1826 aa17.17■□□□□ 0.34
RFPL3-201ENST00000249007 MEGF6O75095 1541 aa17.16■□□□□ 0.34
RFPL3-201ENST00000249007 PALLDQ8WX93 1383 aa17.16■□□□□ 0.34
RFPL3-201ENST00000249007 PHF14O94880 888 aa17.16■□□□□ 0.34
RFPL3-201ENST00000249007 AMIGO3Q86WK7 504 aa17.16■□□□□ 0.34
RFPL3-201ENST00000249007 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.15■□□□□ 0.34
RFPL3-201ENST00000249007 FSTL1Q12841 308 aa17.15■□□□□ 0.34
RFPL3-201ENST00000249007 C4BP0C0L5 1744 aa17.15■□□□□ 0.34
RFPL3-201ENST00000249007 TOGARAM1Q9Y4F4 1720 aa17.14■□□□□ 0.33
RFPL3-201ENST00000249007 NSD3Q9BZ95 1437 aa17.14■□□□□ 0.33
RFPL3-201ENST00000249007 BCS1LQ9Y276 419 aa17.13■□□□□ 0.33
RFPL3-201ENST00000249007 UBR3Q6ZT12 1888 aa17.13■□□□□ 0.33
RFPL3-201ENST00000249007 PXDNLA1KZ92 1463 aa17.13■□□□□ 0.33
RFPL3-201ENST00000249007 CD163L1Q9NR16 1453 aa17.13■□□□□ 0.33
RFPL3-201ENST00000249007 ARHGAP27Q6ZUM4 889 aa17.12■□□□□ 0.33
RFPL3-201ENST00000249007 SMIM5Q71RC9 77 aa17.12■□□□□ 0.33
RFPL3-201ENST00000249007 EDC4Q6P2E9 1401 aaKnown RBP17.11■□□□□ 0.33
RFPL3-201ENST00000249007 SSFA2P28290 1259 aa17.11■□□□□ 0.33
RFPL3-201ENST00000249007 MPRIPQ6WCQ1 1025 aa17.11■□□□□ 0.33
RFPL3-201ENST00000249007 HDGFL2Q7Z4V5 671 aaPredicted RBP17.11■□□□□ 0.33
RFPL3-201ENST00000249007 CGNL1Q0VF96 1302 aa17.1■□□□□ 0.33
RFPL3-201ENST00000249007 RGPD2P0DJD1 1756 aa17.1■□□□□ 0.33
RFPL3-201ENST00000249007 SLC34A2O95436 690 aa17.09■□□□□ 0.33
RFPL3-201ENST00000249007 HOXC9P31274 260 aa17.09■□□□□ 0.33
RFPL3-201ENST00000249007 TMC1Q8TDI8 760 aa17.09■□□□□ 0.33
RFPL3-201ENST00000249007 PLEKHG2Q9H7P9 1386 aa17.09■□□□□ 0.33
RFPL3-201ENST00000249007 MAP3K19Q56UN5 1328 aa17.08■□□□□ 0.33
RFPL3-201ENST00000249007 N4BP2Q86UW6 1770 aaPredicted RBP17.08■□□□□ 0.32
RFPL3-201ENST00000249007 A0A0G2JLW4 131 aa17.08■□□□□ 0.32
RFPL3-201ENST00000249007 MMP10P09238 476 aa17.08■□□□□ 0.32
RFPL3-201ENST00000249007 HSPA1AP0DMV8 641 aaKnown RBP17.08■□□□□ 0.32
RFPL3-201ENST00000249007 HSPA1BP0DMV9 641 aaKnown RBP17.08■□□□□ 0.32
RFPL3-201ENST00000249007 TGFB2P61812 414 aa17.08■□□□□ 0.32
RFPL3-201ENST00000249007 SMARCC1Q92922 1105 aaPredicted RBP17.08■□□□□ 0.32
RFPL3-201ENST00000249007 KIF13BQ9NQT8 1826 aa17.08■□□□□ 0.32
RFPL3-201ENST00000249007 KDM2BQ8NHM5 1336 aa17.08■□□□□ 0.32
RFPL3-201ENST00000249007 AMPHP49418 695 aa17.07■□□□□ 0.32
RFPL3-201ENST00000249007 C9orf131Q5VYM1 1079 aa17.07■□□□□ 0.32
RFPL3-201ENST00000249007 RAPGEF4Q8WZA2 1011 aa17.07■□□□□ 0.32
RFPL3-201ENST00000249007 KIAA1551Q9HCM1 1747 aa17.07■□□□□ 0.32
RFPL3-201ENST00000249007 ROCK2O75116 1388 aaKnown RBP17.06■□□□□ 0.32
RFPL3-201ENST00000249007 KCPQ6ZWJ8 1503 aa17.06■□□□□ 0.32
RFPL3-201ENST00000249007 PCDH11XQ9BZA7 1347 aa17.06■□□□□ 0.32
RFPL3-201ENST00000249007 PCDH11YQ9BZA8 1340 aa17.06■□□□□ 0.32
RFPL3-201ENST00000249007 FCHSD2O94868 740 aa17.05■□□□□ 0.32
RFPL3-201ENST00000249007 SLC12A5Q9H2X9 1139 aa17.05■□□□□ 0.32
RFPL3-201ENST00000249007 NBPF6Q5VWK0 638 aa17.05■□□□□ 0.32
RFPL3-201ENST00000249007 C10orf71Q711Q0 1435 aa17.05■□□□□ 0.32
RFPL3-201ENST00000249007 USHBP1Q8N6Y0 703 aa17.05■□□□□ 0.32
RFPL3-201ENST00000249007 SMC1BQ8NDV3 1235 aa17.05■□□□□ 0.32
RFPL3-201ENST00000249007 NBPF4Q96M43 638 aa17.05■□□□□ 0.32
RFPL3-201ENST00000249007 TERF2IPQ9NYB0 399 aa17.05■□□□□ 0.32
RFPL3-201ENST00000249007 A0A1W2PP64 1363 aa17.04■□□□□ 0.32
RFPL3-201ENST00000249007 GNPATO15228 680 aa17.04■□□□□ 0.32
RFPL3-201ENST00000249007 LINC00116Q8NCU8 138 aa17.04■□□□□ 0.32
RFPL3-201ENST00000249007 TATP17735 454 aaPredicted RBP17.03■□□□□ 0.32
RFPL3-201ENST00000249007 RRAGCQ9HB90 399 aa17.03■□□□□ 0.32
RFPL3-201ENST00000249007 PKD1L3Q7Z443 1732 aa17.03■□□□□ 0.32
RFPL3-201ENST00000249007 DPEP1P16444 411 aa17.02■□□□□ 0.32
RFPL3-201ENST00000249007 L3MBTL2Q969R5 705 aa17.02■□□□□ 0.32
RFPL3-201ENST00000249007 COG3Q96JB2 828 aa17.02■□□□□ 0.32
RFPL3-201ENST00000249007 ITGB4P16144 1822 aa17.02■□□□□ 0.31
RFPL3-201ENST00000249007 LOC102724428A0A0B4J2F2 783 aa17.01■□□□□ 0.31
RFPL3-201ENST00000249007 FBLN1P23142 703 aa17.01■□□□□ 0.31
RFPL3-201ENST00000249007 SIK1P57059 783 aa17.01■□□□□ 0.31
RFPL3-201ENST00000249007 TNRC6CQ9HCJ0 1690 aaKnown RBP17.01■□□□□ 0.31
RFPL3-201ENST00000249007 BRCA1P38398 1863 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms