RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 DDX54Q8TDD1 881 aaKnown RBP33.02■■■□□ 2.88
SDF2L1-201ENST00000248958 NHSQ6T4R5 1651 aa33.01■■■□□ 2.87
SDF2L1-201ENST00000248958 RGPD3A6NKT7 1758 aaPredicted RBP33■■■□□ 2.87
SDF2L1-201ENST00000248958 RGPD4Q7Z3J3 1758 aa33■■■□□ 2.87
SDF2L1-201ENST00000248958 MTHFSP49914 203 aa32.99■■■□□ 2.87
SDF2L1-201ENST00000248958 CAMKK2Q96RR4 588 aa32.99■■■□□ 2.87
SDF2L1-201ENST00000248958 PLEKHG2Q9H7P9 1386 aa32.98■■■□□ 2.87
SDF2L1-201ENST00000248958 IGSF1Q8N6C5 1336 aa32.98■■■□□ 2.87
SDF2L1-201ENST00000248958 PKD1L3Q7Z443 1732 aa32.97■■■□□ 2.87
SDF2L1-201ENST00000248958 PLSCR1O15162 318 aa32.97■■■□□ 2.87
SDF2L1-201ENST00000248958 EZH2Q15910 746 aaKnown RBP32.96■■■□□ 2.87
SDF2L1-201ENST00000248958 PCDH11XQ9BZA7 1347 aa32.96■■■□□ 2.87
SDF2L1-201ENST00000248958 PCDH11YQ9BZA8 1340 aa32.96■■■□□ 2.87
SDF2L1-201ENST00000248958 SRCAPQ6ZRS2 3230 aa32.96■■■□□ 2.87
SDF2L1-201ENST00000248958 KAT6BQ8WYB5 2073 aa32.94■■■□□ 2.86
SDF2L1-201ENST00000248958 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.94■■■□□ 2.86
SDF2L1-201ENST00000248958 RREB1Q92766 1687 aa32.94■■■□□ 2.86
SDF2L1-201ENST00000248958 CNGB1Q14028 1251 aaPredicted RBP32.93■■■□□ 2.86
SDF2L1-201ENST00000248958 SPG7Q9UQ90 795 aa32.93■■■□□ 2.86
SDF2L1-201ENST00000248958 ACSBG1Q96GR2 724 aa32.92■■■□□ 2.86
SDF2L1-201ENST00000248958 IL13P35225 146 aa32.91■■■□□ 2.86
SDF2L1-201ENST00000248958 DOT1LQ8TEK3 1739 aa32.89■■■□□ 2.86
SDF2L1-201ENST00000248958 KCNQ2O43526 872 aa32.89■■■□□ 2.86
SDF2L1-201ENST00000248958 PTF1AQ7RTS3 328 aa32.89■■■□□ 2.86
SDF2L1-201ENST00000248958 BTAF1O14981 1849 aa32.87■■■□□ 2.85
SDF2L1-201ENST00000248958 DIAPH1O60610 1272 aaKnown RBP32.86■■■□□ 2.85
SDF2L1-201ENST00000248958 NUP188Q5SRE5 1749 aa32.85■■■□□ 2.85
SDF2L1-201ENST00000248958 KDRP35968 1356 aa32.83■■■□□ 2.85
SDF2L1-201ENST00000248958 CYP27B1O15528 508 aa32.83■■■□□ 2.85
SDF2L1-201ENST00000248958 SULT6B1Q6IMI4 303 aa32.82■■■□□ 2.84
SDF2L1-201ENST00000248958 CFAP53Q96M91 514 aa32.82■■■□□ 2.84
SDF2L1-201ENST00000248958 PRIM1P49642 420 aaKnown RBP32.81■■■□□ 2.84
SDF2L1-201ENST00000248958 AMOTQ4VCS5 1084 aa32.81■■■□□ 2.84
SDF2L1-201ENST00000248958 NBPF14Q5TI25 921 aa32.81■■■□□ 2.84
SDF2L1-201ENST00000248958 IFNL2Q8IZJ0 200 aa32.81■■■□□ 2.84
SDF2L1-201ENST00000248958 NKX1-1Q15270 411 aaPredicted RBP32.8■■■□□ 2.84
SDF2L1-201ENST00000248958 PLEKHO1Q53GL0 409 aaPredicted RBP32.8■■■□□ 2.84
SDF2L1-201ENST00000248958 SYTL4Q96C24 671 aaPredicted RBP32.8■■■□□ 2.84
SDF2L1-201ENST00000248958 COL3A1P02461 1466 aaPredicted RBP32.8■■■□□ 2.84
SDF2L1-201ENST00000248958 PPP2R1AP30153 589 aa32.79■■■□□ 2.84
SDF2L1-201ENST00000248958 DDX10Q13206 875 aaKnown RBP32.78■■■□□ 2.84
SDF2L1-201ENST00000248958 AEBP1Q8IUX7 1158 aa32.77■■■□□ 2.84
SDF2L1-201ENST00000248958 PHKG2P15735 406 aa32.76■■■□□ 2.83
SDF2L1-201ENST00000248958 TXNRD1Q16881 649 aa32.76■■■□□ 2.83
SDF2L1-201ENST00000248958 PROM2Q8N271 834 aa32.74■■■□□ 2.83
SDF2L1-201ENST00000248958 ITGB4P16144 1822 aa32.73■■■□□ 2.83
SDF2L1-201ENST00000248958 HSP90AB1P08238 724 aaKnown RBP32.73■■■□□ 2.83
SDF2L1-201ENST00000248958 TOGARAM1Q9Y4F4 1720 aa32.72■■■□□ 2.83
SDF2L1-201ENST00000248958 NUDCQ9Y266 331 aa32.7■■■□□ 2.83
SDF2L1-201ENST00000248958 LY75O60449 1722 aa32.69■■■□□ 2.82
SDF2L1-201ENST00000248958 HMOX1P09601 288 aa32.69■■■□□ 2.82
SDF2L1-201ENST00000248958 PSDA5PKW4 1024 aaPredicted RBP32.68■■■□□ 2.82
SDF2L1-201ENST00000248958 U2SURPO15042 1029 aaKnown RBP32.68■■■□□ 2.82
SDF2L1-201ENST00000248958 R3HDM1Q15032 1099 aaKnown RBP32.68■■■□□ 2.82
SDF2L1-201ENST00000248958 RALBP1Q15311 655 aa32.68■■■□□ 2.82
SDF2L1-201ENST00000248958 ZNF530Q6P9A1 599 aaPredicted RBP32.68■■■□□ 2.82
SDF2L1-201ENST00000248958 C1orf141Q5JVX7 400 aa32.67■■■□□ 2.82
SDF2L1-201ENST00000248958 SLC27A3Q5K4L6 730 aa32.67■■■□□ 2.82
SDF2L1-201ENST00000248958 MPRIPQ6WCQ1 1025 aa32.66■■■□□ 2.82
SDF2L1-201ENST00000248958 DCAF5Q96JK2 942 aa32.65■■■□□ 2.82
SDF2L1-201ENST00000248958 HMGB2P26583 209 aaKnown RBP32.63■■■□□ 2.81
SDF2L1-201ENST00000248958 ERVV-2B6SEH9 535 aa32.62■■■□□ 2.81
SDF2L1-201ENST00000248958 SMARCC1Q92922 1105 aaPredicted RBP32.62■■■□□ 2.81
SDF2L1-201ENST00000248958 TMOD3Q9NYL9 352 aa32.62■■■□□ 2.81
SDF2L1-201ENST00000248958 STK32BQ9NY57 414 aa32.61■■■□□ 2.81
SDF2L1-201ENST00000248958 AKAP4Q5JQC9 854 aa32.6■■■□□ 2.81
SDF2L1-201ENST00000248958 PAPPAQ13219 1627 aa32.59■■■□□ 2.81
SDF2L1-201ENST00000248958 PIGBQ92521 554 aa32.59■■■□□ 2.81
SDF2L1-201ENST00000248958 ANO8Q9HCE9 1232 aaPredicted RBP32.58■■■□□ 2.81
SDF2L1-201ENST00000248958 ZNF316A6NFI3 1004 aaPredicted RBP32.57■■■□□ 2.8
SDF2L1-201ENST00000248958 SLC15A2Q16348 729 aa32.57■■■□□ 2.8
SDF2L1-201ENST00000248958 LRRC4BQ9NT99 713 aa32.57■■■□□ 2.8
SDF2L1-201ENST00000248958 PALLDQ8WX93 1383 aa32.57■■■□□ 2.8
SDF2L1-201ENST00000248958 SCN11AQ9UI33 1791 aa32.56■■■□□ 2.8
SDF2L1-201ENST00000248958 KDM6AO15550 1401 aaPredicted RBP32.56■■■□□ 2.8
SDF2L1-201ENST00000248958 CCNL1Q9UK58 526 aaPredicted RBP32.55■■■□□ 2.8
SDF2L1-201ENST00000248958 U2AF1L5P0DN76 240 aaPredicted RBP32.54■■■□□ 2.8
SDF2L1-201ENST00000248958 U2AF1Q01081 240 aaKnown RBP eCLIP32.54■■■□□ 2.8
SDF2L1-201ENST00000248958 MTHFSDQ2M296 383 aaKnown RBP32.54■■■□□ 2.8
SDF2L1-201ENST00000248958 LRP5O75197 1615 aa32.54■■■□□ 2.8
SDF2L1-201ENST00000248958 GAS2L2Q8NHY3 880 aa32.53■■■□□ 2.8
SDF2L1-201ENST00000248958 MYBBP1AQ9BQG0 1328 aaKnown RBP32.52■■■□□ 2.8
SDF2L1-201ENST00000248958 VIRMAQ69YN4 1812 aaKnown RBP32.52■■■□□ 2.8
SDF2L1-201ENST00000248958 FCHSD2O94868 740 aa32.52■■■□□ 2.8
SDF2L1-201ENST00000248958 CABP4P57796 275 aa32.52■■■□□ 2.8
SDF2L1-201ENST00000248958 RSPH6AQ9H0K4 717 aa32.52■■■□□ 2.8
SDF2L1-201ENST00000248958 PRKAR2BP31323 418 aa32.49■■■□□ 2.79
SDF2L1-201ENST00000248958 QSER1Q2KHR3 1735 aa32.48■■■□□ 2.79
SDF2L1-201ENST00000248958 C5P01031 1676 aa32.47■■■□□ 2.79
SDF2L1-201ENST00000248958 ADAMTS7Q9UKP4 1686 aa32.47■■■□□ 2.79
SDF2L1-201ENST00000248958 TAF1LQ8IZX4 1826 aa32.47■■■□□ 2.79
SDF2L1-201ENST00000248958 AKT1S1Q96B36 256 aa32.47■■■□□ 2.79
SDF2L1-201ENST00000248958 CASZ1Q86V15 1759 aa32.47■■■□□ 2.79
SDF2L1-201ENST00000248958 ASAP1Q9ULH1 1129 aa32.46■■■□□ 2.79
SDF2L1-201ENST00000248958 RNMTO43148 476 aaKnown RBP32.45■■■□□ 2.79
SDF2L1-201ENST00000248958 ATG3Q9NT62 314 aa32.45■■■□□ 2.79
SDF2L1-201ENST00000248958 KCNQ4P56696 695 aa32.44■■■□□ 2.78
SDF2L1-201ENST00000248958 ZNF827Q17R98 1081 aa32.44■■■□□ 2.78
SDF2L1-201ENST00000248958 PRKRIP1Q9H875 184 aaPredicted RBP32.44■■■□□ 2.78
SDF2L1-201ENST00000248958 LOC102724428A0A0B4J2F2 783 aa32.43■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 143.6 ms