RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 SLC4A10Q6U841 1118 aa31.8■■■□□ 2.68
RAB40C-201ENST00000248139 RGS12O14924 1447 aa31.8■■■□□ 2.68
RAB40C-201ENST00000248139 USP6P35125 1406 aa31.8■■■□□ 2.68
RAB40C-201ENST00000248139 PLEKHG3A1L390 1219 aa31.8■■■□□ 2.68
RAB40C-201ENST00000248139 SNX21Q969T3 373 aa31.79■■■□□ 2.68
RAB40C-201ENST00000248139 PEAK1Q9H792 1746 aa31.79■■■□□ 2.68
RAB40C-201ENST00000248139 PTPRUQ92729 1446 aa31.78■■■□□ 2.68
RAB40C-201ENST00000248139 HSP90AA1P07900 732 aaKnown RBP31.78■■■□□ 2.68
RAB40C-201ENST00000248139 AMOTL2Q9Y2J4 779 aa31.78■■■□□ 2.68
RAB40C-201ENST00000248139 CEP85Q6P2H3 762 aa31.78■■■□□ 2.68
RAB40C-201ENST00000248139 DDIT3P35638 169 aa31.77■■■□□ 2.68
RAB40C-201ENST00000248139 CDC45O75419 566 aa31.77■■■□□ 2.68
RAB40C-201ENST00000248139 ZBTB4Q9P1Z0 1013 aaPredicted RBP31.77■■■□□ 2.68
RAB40C-201ENST00000248139 UBR1Q8IWV7 1749 aa31.76■■■□□ 2.68
RAB40C-201ENST00000248139 ANKRD44Q8N8A2 993 aa31.76■■■□□ 2.68
RAB40C-201ENST00000248139 NECTIN2Q92692 538 aa31.76■■■□□ 2.68
RAB40C-201ENST00000248139 TNPO1Q92973 898 aaKnown RBP31.76■■■□□ 2.68
RAB40C-201ENST00000248139 NGDNQ8NEJ9 315 aaKnown RBP31.75■■■□□ 2.67
RAB40C-201ENST00000248139 ATP10DQ9P241 1426 aa31.75■■■□□ 2.67
RAB40C-201ENST00000248139 TSPYL4Q9UJ04 414 aa31.74■■■□□ 2.67
RAB40C-201ENST00000248139 PANK2Q9BZ23 570 aa31.74■■■□□ 2.67
RAB40C-201ENST00000248139 RIMS1Q86UR5 1692 aaKnown RBP31.74■■■□□ 2.67
RAB40C-201ENST00000248139 NCOA3Q9Y6Q9 1424 aa31.73■■■□□ 2.67
RAB40C-201ENST00000248139 XRCC6P12956 609 aaKnown RBP eCLIP31.72■■■□□ 2.67
RAB40C-201ENST00000248139 TTC22Q5TAA0 569 aa31.72■■■□□ 2.67
RAB40C-201ENST00000248139 NRKQ7Z2Y5 1582 aa31.72■■■□□ 2.67
RAB40C-201ENST00000248139 RTL1A6NKG5 1358 aa31.72■■■□□ 2.67
RAB40C-201ENST00000248139 RTF1Q92541 710 aaKnown RBP31.72■■■□□ 2.67
RAB40C-201ENST00000248139 CRB1P82279 1406 aa31.71■■■□□ 2.67
RAB40C-201ENST00000248139 AMPHP49418 695 aa31.71■■■□□ 2.67
RAB40C-201ENST00000248139 GAS2L2Q8NHY3 880 aa31.71■■■□□ 2.67
RAB40C-201ENST00000248139 EYA1Q99502 592 aa31.71■■■□□ 2.67
RAB40C-201ENST00000248139 GOLGA6L3A6NEY3 463 aa31.7■■■□□ 2.67
RAB40C-201ENST00000248139 KIF13AQ9H1H9 1805 aa31.69■■■□□ 2.66
RAB40C-201ENST00000248139 K7ELQ4 463 aaPredicted RBP31.69■■■□□ 2.66
RAB40C-201ENST00000248139 LTV1Q96GA3 475 aaPredicted RBP31.68■■■□□ 2.66
RAB40C-201ENST00000248139 PLEKHG1Q9ULL1 1385 aa31.68■■■□□ 2.66
RAB40C-201ENST00000248139 SDSP20132 328 aa31.67■■■□□ 2.66
RAB40C-201ENST00000248139 RPAP2Q8IXW5 612 aaPredicted RBP31.67■■■□□ 2.66
RAB40C-201ENST00000248139 L1TD1Q5T7N2 865 aaKnown RBP31.67■■■□□ 2.66
RAB40C-201ENST00000248139 EID1Q9Y6B2 187 aa31.66■■■□□ 2.66
RAB40C-201ENST00000248139 USP31Q70CQ4 1352 aa31.66■■■□□ 2.66
RAB40C-201ENST00000248139 KIAA0232Q92628 1395 aa31.66■■■□□ 2.66
RAB40C-201ENST00000248139 TSHZ3Q63HK5 1081 aa31.66■■■□□ 2.66
RAB40C-201ENST00000248139 KIF24Q5T7B8 1368 aa31.65■■■□□ 2.66
RAB40C-201ENST00000248139 NLRP6P59044 892 aa31.64■■■□□ 2.66
RAB40C-201ENST00000248139 PTPRCP08575 1304 aa31.64■■■□□ 2.66
RAB40C-201ENST00000248139 FSD2A1L4K1 749 aa31.63■■■□□ 2.65
RAB40C-201ENST00000248139 SSFA2P28290 1259 aa31.63■■■□□ 2.65
RAB40C-201ENST00000248139 SSH2Q76I76 1423 aa31.63■■■□□ 2.65
RAB40C-201ENST00000248139 RAB3GAP1Q15042 981 aa31.62■■■□□ 2.65
RAB40C-201ENST00000248139 HAP1P54257 671 aaPredicted RBP31.62■■■□□ 2.65
RAB40C-201ENST00000248139 TOPAZ1Q8N9V7 1692 aa31.62■■■□□ 2.65
RAB40C-201ENST00000248139 EXOC6BQ9Y2D4 811 aa31.62■■■□□ 2.65
RAB40C-201ENST00000248139 CEP170BQ9Y4F5 1589 aaPredicted RBP31.61■■■□□ 2.65
RAB40C-201ENST00000248139 DDX11L8A8MPP1 907 aa31.61■■■□□ 2.65
RAB40C-201ENST00000248139 USP26Q9BXU7 913 aa31.61■■■□□ 2.65
RAB40C-201ENST00000248139 RGPD8O14715 1765 aaPredicted RBP31.6■■■□□ 2.65
RAB40C-201ENST00000248139 RBM33Q96EV2 1170 aaKnown RBP31.6■■■□□ 2.65
RAB40C-201ENST00000248139 FLT4P35916 1363 aa31.59■■■□□ 2.65
RAB40C-201ENST00000248139 RGPD1P0DJD0 1748 aa31.59■■■□□ 2.65
RAB40C-201ENST00000248139 USHBP1Q8N6Y0 703 aa31.58■■■□□ 2.65
RAB40C-201ENST00000248139 ARHGEF10O15013 1369 aa31.58■■■□□ 2.65
RAB40C-201ENST00000248139 AK9Q5TCS8 1911 aa31.57■■■□□ 2.64
RAB40C-201ENST00000248139 C14orf37Q86TY3 774 aa31.57■■■□□ 2.64
RAB40C-201ENST00000248139 RRAGDQ9NQL2 400 aaPredicted RBP31.57■■■□□ 2.64
RAB40C-201ENST00000248139 SBNO1A3KN83 1393 aa31.57■■■□□ 2.64
RAB40C-201ENST00000248139 NALCNQ8IZF0 1738 aa31.55■■■□□ 2.64
RAB40C-201ENST00000248139 TTC21AQ8NDW8 1320 aa31.55■■■□□ 2.64
RAB40C-201ENST00000248139 FKBP5Q13451 457 aaPredicted RBP31.55■■■□□ 2.64
RAB40C-201ENST00000248139 CIZ1Q9ULV3 898 aaPredicted RBP31.55■■■□□ 2.64
RAB40C-201ENST00000248139 PLEKHG5O94827 1062 aa31.54■■■□□ 2.64
RAB40C-201ENST00000248139 FAM43AQ8N2R8 423 aa31.54■■■□□ 2.64
RAB40C-201ENST00000248139 GBP4Q96PP9 640 aa31.54■■■□□ 2.64
RAB40C-201ENST00000248139 IGSF1Q8N6C5 1336 aa31.54■■■□□ 2.64
RAB40C-201ENST00000248139 STK31Q9BXU1 1019 aa31.52■■■□□ 2.64
RAB40C-201ENST00000248139 KCNA6P17658 529 aa31.52■■■□□ 2.64
RAB40C-201ENST00000248139 PNMA6EA0A0J9YXQ4 647 aa31.52■■■□□ 2.64
RAB40C-201ENST00000248139 PKP1Q13835 747 aa31.52■■■□□ 2.64
RAB40C-201ENST00000248139 GAS2L3Q86XJ1 694 aa31.52■■■□□ 2.64
RAB40C-201ENST00000248139 FLIIQ13045 1269 aa31.51■■■□□ 2.63
RAB40C-201ENST00000248139 IL17REQ8NFR9 667 aa31.51■■■□□ 2.63
RAB40C-201ENST00000248139 TBX22Q9Y458 520 aa31.51■■■□□ 2.63
RAB40C-201ENST00000248139 KDRP35968 1356 aa31.5■■■□□ 2.63
RAB40C-201ENST00000248139 RABEP1Q15276 862 aa31.5■■■□□ 2.63
RAB40C-201ENST00000248139 HOXC9P31274 260 aa31.5■■■□□ 2.63
RAB40C-201ENST00000248139 CCT4P50991 539 aaKnown RBP31.5■■■□□ 2.63
RAB40C-201ENST00000248139 ABTB2Q8N961 1025 aa31.5■■■□□ 2.63
RAB40C-201ENST00000248139 PDE1AP54750 535 aa31.49■■■□□ 2.63
RAB40C-201ENST00000248139 HMMRO75330 724 aa31.49■■■□□ 2.63
RAB40C-201ENST00000248139 GNAT3A8MTJ3 354 aa31.48■■■□□ 2.63
RAB40C-201ENST00000248139 GNAI2P04899 355 aa31.48■■■□□ 2.63
RAB40C-201ENST00000248139 ZBTB7CA1YPR0 619 aa31.48■■■□□ 2.63
RAB40C-201ENST00000248139 GRPEL1Q9HAV7 217 aa31.47■■■□□ 2.63
RAB40C-201ENST00000248139 ZGPATQ8N5A5 531 aaKnown RBP31.46■■■□□ 2.63
RAB40C-201ENST00000248139 DIP2AQ14689 1571 aa31.46■■■□□ 2.63
RAB40C-201ENST00000248139 FMN2Q9NZ56 1722 aa31.46■■■□□ 2.63
RAB40C-201ENST00000248139 CASC1Q6TDU7 716 aa31.45■■■□□ 2.62
RAB40C-201ENST00000248139 PIK3C2AO00443 1686 aa31.44■■■□□ 2.62
RAB40C-201ENST00000248139 CHAMP1Q96JM3 812 aa31.44■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms