RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 IL13P35225 146 aa13.96□□□□□ -0.17
SOX9-201ENST00000245479 NINLQ9Y2I6 1382 aa13.96□□□□□ -0.18
SOX9-201ENST00000245479 UBTFL1P0CB47 393 aaPredicted RBP13.96□□□□□ -0.18
SOX9-201ENST00000245479 ZGPATQ8N5A5 531 aaKnown RBP13.95□□□□□ -0.18
SOX9-201ENST00000245479 ZNF592Q92610 1267 aa13.95□□□□□ -0.18
SOX9-201ENST00000245479 PHAXQ9H814 394 aaKnown RBP13.95□□□□□ -0.18
SOX9-201ENST00000245479 NRDCO43847 1150 aa13.95□□□□□ -0.18
SOX9-201ENST00000245479 METP08581 1390 aa13.95□□□□□ -0.18
SOX9-201ENST00000245479 DDX17Q92841 729 aaKnown RBP13.95□□□□□ -0.18
SOX9-201ENST00000245479 DIAPH3Q9NSV4 1193 aa13.95□□□□□ -0.18
SOX9-201ENST00000245479 IFT57Q9NWB7 429 aa13.95□□□□□ -0.18
SOX9-201ENST00000245479 RBM27Q9P2N5 1060 aaKnown RBP13.95□□□□□ -0.18
SOX9-201ENST00000245479 SRGAP3O43295 1099 aa13.94□□□□□ -0.18
SOX9-201ENST00000245479 SDSP20132 328 aa13.94□□□□□ -0.18
SOX9-201ENST00000245479 TTC21BQ7Z4L5 1316 aa13.94□□□□□ -0.18
SOX9-201ENST00000245479 PKP1Q13835 747 aa13.94□□□□□ -0.18
SOX9-201ENST00000245479 SIRT2Q8IXJ6 389 aa13.94□□□□□ -0.18
SOX9-201ENST00000245479 CROCC2H7BZ55 1655 aa13.94□□□□□ -0.18
SOX9-201ENST00000245479 CWC27Q6UX04 472 aaKnown RBP13.94□□□□□ -0.18
SOX9-201ENST00000245479 GCC1Q96CN9 775 aa13.94□□□□□ -0.18
SOX9-201ENST00000245479 REC8O95072 547 aa13.93□□□□□ -0.18
SOX9-201ENST00000245479 INTS3Q68E01 1043 aaKnown RBP13.93□□□□□ -0.18
SOX9-201ENST00000245479 TCEANC2Q96MN5 208 aa13.93□□□□□ -0.18
SOX9-201ENST00000245479 EYA1Q99502 592 aa13.93□□□□□ -0.18
SOX9-201ENST00000245479 EIF2AK4Q9P2K8 1649 aaKnown RBP13.93□□□□□ -0.18
SOX9-201ENST00000245479 MBD3O95983 291 aa13.93□□□□□ -0.18
SOX9-201ENST00000245479 TAF7Q15545 349 aaPredicted RBP13.93□□□□□ -0.18
SOX9-201ENST00000245479 SASS6Q6UVJ0 657 aa13.93□□□□□ -0.18
SOX9-201ENST00000245479 SMC5Q8IY18 1101 aa13.93□□□□□ -0.18
SOX9-201ENST00000245479 FBXW7Q969H0 707 aa13.93□□□□□ -0.18
SOX9-201ENST00000245479 SYCE3A1L190 88 aa13.93□□□□□ -0.18
SOX9-201ENST00000245479 SPG7Q9UQ90 795 aa13.93□□□□□ -0.18
SOX9-201ENST00000245479 MAP3K19Q56UN5 1328 aa13.93□□□□□ -0.18
SOX9-201ENST00000245479 CPA1P15085 419 aa13.92□□□□□ -0.18
SOX9-201ENST00000245479 ZNF530Q6P9A1 599 aaPredicted RBP13.92□□□□□ -0.18
SOX9-201ENST00000245479 SLC39A6Q13433 755 aa13.92□□□□□ -0.18
SOX9-201ENST00000245479 CABLES1Q8TDN4 633 aa13.92□□□□□ -0.18
SOX9-201ENST00000245479 TSPY26PQ9H489 355 aa13.92□□□□□ -0.18
SOX9-201ENST00000245479 SYNMO15061 1565 aa13.92□□□□□ -0.18
SOX9-201ENST00000245479 GNAI2P04899 355 aa13.92□□□□□ -0.18
SOX9-201ENST00000245479 HDAC1Q13547 482 aaPredicted RBP13.92□□□□□ -0.18
SOX9-201ENST00000245479 ZFYVE16Q7Z3T8 1539 aa13.92□□□□□ -0.18
SOX9-201ENST00000245479 OFD1O75665 1012 aa13.91□□□□□ -0.18
SOX9-201ENST00000245479 RABEP1Q15276 862 aa13.91□□□□□ -0.18
SOX9-201ENST00000245479 ZNF692Q9BU19 519 aaPredicted RBP13.91□□□□□ -0.18
SOX9-201ENST00000245479 KCNA6P17658 529 aa13.91□□□□□ -0.18
SOX9-201ENST00000245479 FLIIQ13045 1269 aa13.91□□□□□ -0.18
SOX9-201ENST00000245479 C1orf141Q5JVX7 400 aa13.91□□□□□ -0.18
SOX9-201ENST00000245479 E9PCH4 1651 aa13.9□□□□□ -0.18
SOX9-201ENST00000245479 KCNQ3O43525 872 aa13.9□□□□□ -0.18
SOX9-201ENST00000245479 ALDH1L2Q3SY69 923 aa13.9□□□□□ -0.18
SOX9-201ENST00000245479 PRR36Q9H6K5 1346 aa13.9□□□□□ -0.18
SOX9-201ENST00000245479 PLEKHM2Q8IWE5 1019 aa13.9□□□□□ -0.18
SOX9-201ENST00000245479 RIMS2Q9UQ26 1411 aa13.9□□□□□ -0.18
SOX9-201ENST00000245479 VPS37CA5D8V6 355 aaPredicted RBP13.9□□□□□ -0.18
SOX9-201ENST00000245479 DYNC1I1O14576 645 aa13.9□□□□□ -0.18
SOX9-201ENST00000245479 STK3Q13188 491 aa13.9□□□□□ -0.18
SOX9-201ENST00000245479 CHRNA2Q15822 529 aa13.9□□□□□ -0.18
SOX9-201ENST00000245479 PA2G4Q9UQ80 394 aaKnown RBP13.9□□□□□ -0.18
SOX9-201ENST00000245479 LGR6Q9HBX8 967 aa13.89□□□□□ -0.19
SOX9-201ENST00000245479 KIF3AQ9Y496 699 aa13.89□□□□□ -0.19
SOX9-201ENST00000245479 PI4KAP2A4QPH2 592 aa13.89□□□□□ -0.19
SOX9-201ENST00000245479 GSPT1P15170 499 aaKnown RBP13.89□□□□□ -0.19
SOX9-201ENST00000245479 PI4KAP1Q8N8J0 262 aa13.89□□□□□ -0.19
SOX9-201ENST00000245479 POGZQ7Z3K3 1410 aa13.89□□□□□ -0.19
SOX9-201ENST00000245479 KAT6BQ8WYB5 2073 aa13.89□□□□□ -0.19
SOX9-201ENST00000245479 PNMA6EA0A0J9YXQ4 647 aa13.89□□□□□ -0.19
SOX9-201ENST00000245479 MAPK8IP2Q13387 824 aaPredicted RBP13.89□□□□□ -0.19
SOX9-201ENST00000245479 TRPM2O94759 1503 aa13.89□□□□□ -0.19
SOX9-201ENST00000245479 FAM177BA6PVY3 158 aa13.88□□□□□ -0.19
SOX9-201ENST00000245479 BAG4O95429 457 aaKnown RBP13.88□□□□□ -0.19
SOX9-201ENST00000245479 KLHL40Q2TBA0 621 aa13.88□□□□□ -0.19
SOX9-201ENST00000245479 NPC1L1Q9UHC9 1359 aa13.88□□□□□ -0.19
SOX9-201ENST00000245479 CCDC30Q5VVM6 783 aa13.88□□□□□ -0.19
SOX9-201ENST00000245479 LRRCC1Q9C099 1032 aa13.88□□□□□ -0.19
SOX9-201ENST00000245479 CCDC8Q9H0W5 538 aaPredicted RBP13.88□□□□□ -0.19
SOX9-201ENST00000245479 NDUFB9Q9Y6M9 179 aa13.88□□□□□ -0.19
SOX9-201ENST00000245479 FERMT3Q86UX7 667 aa13.88□□□□□ -0.19
SOX9-201ENST00000245479 PDCL2Q8N4E4 241 aa13.87□□□□□ -0.19
SOX9-201ENST00000245479 KLHDC4Q8TBB5 520 aa13.87□□□□□ -0.19
SOX9-201ENST00000245479 ABCC11Q96J66 1382 aa13.87□□□□□ -0.19
SOX9-201ENST00000245479 GNAT3A8MTJ3 354 aa13.87□□□□□ -0.19
SOX9-201ENST00000245479 CT47B1P0C2W7 299 aaPredicted RBP13.87□□□□□ -0.19
SOX9-201ENST00000245479 BMP2KLQ5H9B9 411 aa13.87□□□□□ -0.19
SOX9-201ENST00000245479 CEP85Q6P2H3 762 aa13.87□□□□□ -0.19
SOX9-201ENST00000245479 ZMYM3Q14202 1370 aa13.87□□□□□ -0.19
SOX9-201ENST00000245479 FIBPO43427 364 aa13.87□□□□□ -0.19
SOX9-201ENST00000245479 CEBPZQ03701 1054 aaKnown RBP13.86□□□□□ -0.19
SOX9-201ENST00000245479 RIC3Q7Z5B4 369 aa13.86□□□□□ -0.19
SOX9-201ENST00000245479 SYTL4Q96C24 671 aaPredicted RBP13.86□□□□□ -0.19
SOX9-201ENST00000245479 IFIT2P09913 472 aaKnown RBP13.86□□□□□ -0.19
SOX9-201ENST00000245479 SPC24Q8NBT2 197 aa13.86□□□□□ -0.19
SOX9-201ENST00000245479 CHPF2Q9P2E5 772 aa13.86□□□□□ -0.19
SOX9-201ENST00000245479 BTBD11A6QL63 1104 aa13.86□□□□□ -0.19
SOX9-201ENST00000245479 CWF19L2Q2TBE0 894 aaKnown RBP13.86□□□□□ -0.19
SOX9-201ENST00000245479 NEUROD6Q96NK8 337 aa13.86□□□□□ -0.19
SOX9-201ENST00000245479 IQGAP3Q86VI3 1631 aa13.86□□□□□ -0.19
SOX9-201ENST00000245479 CWC22Q9HCG8 908 aaKnown RBP13.85□□□□□ -0.19
SOX9-201ENST00000245479 MSH6P52701 1360 aa13.85□□□□□ -0.19
SOX9-201ENST00000245479 PTCD1O75127 700 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms