RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 MTHFSDQ2M296 383 aaKnown RBP22.06■■□□□ 1.12
CDKN1A-201ENST00000244741 SLIT2O94813 1529 aa22.05■■□□□ 1.12
CDKN1A-201ENST00000244741 RAPGEF4Q8WZA2 1011 aa22.05■■□□□ 1.12
CDKN1A-201ENST00000244741 CARD10Q9BWT7 1032 aa22.04■■□□□ 1.12
CDKN1A-201ENST00000244741 USP21Q9UK80 565 aa22.04■■□□□ 1.12
CDKN1A-201ENST00000244741 UNC5CLQ8IV45 518 aa22.04■■□□□ 1.12
CDKN1A-201ENST00000244741 CRB1P82279 1406 aa22.03■■□□□ 1.12
CDKN1A-201ENST00000244741 NFE2L2Q16236 605 aa22.03■■□□□ 1.12
CDKN1A-201ENST00000244741 MEGF6O75095 1541 aa22.03■■□□□ 1.12
CDKN1A-201ENST00000244741 FAM208AQ9UK61 1670 aaKnown RBP22.03■■□□□ 1.12
CDKN1A-201ENST00000244741 BCL9LQ86UU0 1499 aa22.02■■□□□ 1.12
CDKN1A-201ENST00000244741 AFF2P51816 1311 aa22.02■■□□□ 1.12
CDKN1A-201ENST00000244741 FNBP4Q8N3X1 1017 aaPredicted RBP22.02■■□□□ 1.12
CDKN1A-201ENST00000244741 NCAPD2Q15021 1401 aa22.01■■□□□ 1.11
CDKN1A-201ENST00000244741 DCTN1Q14203 1278 aa22.01■■□□□ 1.11
CDKN1A-201ENST00000244741 THUMPD2Q9BTF0 503 aaKnown RBP22.01■■□□□ 1.11
CDKN1A-201ENST00000244741 TATP17735 454 aaPredicted RBP22.01■■□□□ 1.11
CDKN1A-201ENST00000244741 TRIM35Q9UPQ4 493 aa22.01■■□□□ 1.11
CDKN1A-201ENST00000244741 NRAPQ86VF7 1730 aa22■■□□□ 1.11
CDKN1A-201ENST00000244741 WWC1Q8IX03 1113 aa21.99■■□□□ 1.11
CDKN1A-201ENST00000244741 PLIN1O60240 522 aa21.99■■□□□ 1.11
CDKN1A-201ENST00000244741 IL2RBP14784 551 aa21.98■■□□□ 1.11
CDKN1A-201ENST00000244741 SPATA31A1Q5TZJ5 1347 aa21.98■■□□□ 1.11
CDKN1A-201ENST00000244741 NWD2Q9ULI1 1742 aa21.97■■□□□ 1.11
CDKN1A-201ENST00000244741 PLEKHO1Q53GL0 409 aaPredicted RBP21.97■■□□□ 1.11
CDKN1A-201ENST00000244741 ZNF530Q6P9A1 599 aaPredicted RBP21.97■■□□□ 1.11
CDKN1A-201ENST00000244741 MCM10Q7L590 875 aa21.97■■□□□ 1.11
CDKN1A-201ENST00000244741 SPATA31A5Q5VU36 1347 aa21.97■■□□□ 1.11
CDKN1A-201ENST00000244741 SPATA31A7Q8IWB4 1347 aa21.97■■□□□ 1.11
CDKN1A-201ENST00000244741 DLG5Q8TDM6 1919 aa21.96■■□□□ 1.11
CDKN1A-201ENST00000244741 ZNF521Q96K83 1311 aa21.96■■□□□ 1.11
CDKN1A-201ENST00000244741 GAS2L2Q8NHY3 880 aa21.96■■□□□ 1.11
CDKN1A-201ENST00000244741 SPINK5Q9NQ38 1064 aaPredicted RBP21.96■■□□□ 1.11
CDKN1A-201ENST00000244741 FAM98CQ17RN3 349 aaKnown RBP21.94■■□□□ 1.1
CDKN1A-201ENST00000244741 VPS72Q15906 364 aa21.94■■□□□ 1.1
CDKN1A-201ENST00000244741 DUSP27Q5VZP5 1158 aa21.94■■□□□ 1.1
CDKN1A-201ENST00000244741 AMOTQ4VCS5 1084 aa21.93■■□□□ 1.1
CDKN1A-201ENST00000244741 DDX54Q8TDD1 881 aaKnown RBP21.93■■□□□ 1.1
CDKN1A-201ENST00000244741 MPRIPQ6WCQ1 1025 aa21.92■■□□□ 1.1
CDKN1A-201ENST00000244741 PHF23Q9BUL5 403 aaPredicted RBP21.92■■□□□ 1.1
CDKN1A-201ENST00000244741 GNAT3A8MTJ3 354 aa21.92■■□□□ 1.1
CDKN1A-201ENST00000244741 ZCRB1Q8TBF4 217 aaKnown RBP21.92■■□□□ 1.1
CDKN1A-201ENST00000244741 SPG7Q9UQ90 795 aa21.92■■□□□ 1.1
CDKN1A-201ENST00000244741 LAS1LQ9Y4W2 734 aaKnown RBP21.92■■□□□ 1.1
CDKN1A-201ENST00000244741 OVOS2A0A0G2JMS6 1433 aa21.91■■□□□ 1.1
CDKN1A-201ENST00000244741 GOLGA2Q08379 1002 aa21.91■■□□□ 1.1
CDKN1A-201ENST00000244741 C1orf141Q5JVX7 400 aa21.91■■□□□ 1.1
CDKN1A-201ENST00000244741 RTF1Q92541 710 aaKnown RBP21.91■■□□□ 1.1
CDKN1A-201ENST00000244741 A0A0G2JS52 829 aa21.91■■□□□ 1.1
CDKN1A-201ENST00000244741 CYP27B1O15528 508 aa21.91■■□□□ 1.1
CDKN1A-201ENST00000244741 CCDC27Q2M243 656 aa21.91■■□□□ 1.1
CDKN1A-201ENST00000244741 CRBNQ96SW2 442 aa21.91■■□□□ 1.1
CDKN1A-201ENST00000244741 LGR6Q9HBX8 967 aa21.91■■□□□ 1.1
CDKN1A-201ENST00000244741 QTRT2Q9H974 415 aaKnown RBP21.9■■□□□ 1.1
CDKN1A-201ENST00000244741 MAP3K5Q99683 1374 aa21.9■■□□□ 1.1
CDKN1A-201ENST00000244741 ILDR1Q86SU0 546 aaPredicted RBP21.89■■□□□ 1.09
CDKN1A-201ENST00000244741 IL17REQ8NFR9 667 aa21.89■■□□□ 1.09
CDKN1A-201ENST00000244741 AKAP4Q5JQC9 854 aa21.88■■□□□ 1.09
CDKN1A-201ENST00000244741 NGEFQ8N5V2 710 aa21.88■■□□□ 1.09
CDKN1A-201ENST00000244741 GJD4Q96KN9 370 aaPredicted RBP21.88■■□□□ 1.09
CDKN1A-201ENST00000244741 DISP2A7MBM2 1401 aa21.87■■□□□ 1.09
CDKN1A-201ENST00000244741 PHKG2P15735 406 aa21.87■■□□□ 1.09
CDKN1A-201ENST00000244741 SLFN5Q08AF3 891 aa21.87■■□□□ 1.09
CDKN1A-201ENST00000244741 LMOD3Q0VAK6 560 aa21.87■■□□□ 1.09
CDKN1A-201ENST00000244741 C20orf194Q5TEA3 1177 aa21.87■■□□□ 1.09
CDKN1A-201ENST00000244741 TRPC5Q9UL62 973 aaPredicted RBP21.87■■□□□ 1.09
CDKN1A-201ENST00000244741 PARP4Q9UKK3 1724 aaKnown RBP21.87■■□□□ 1.09
CDKN1A-201ENST00000244741 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.87■■□□□ 1.09
CDKN1A-201ENST00000244741 MIS18AQ9NYP9 233 aa21.87■■□□□ 1.09
CDKN1A-201ENST00000244741 THRAP3Q9Y2W1 955 aaKnown RBP21.87■■□□□ 1.09
CDKN1A-201ENST00000244741 IFNL2Q8IZJ0 200 aa21.86■■□□□ 1.09
CDKN1A-201ENST00000244741 TSR2Q969E8 191 aaKnown RBP21.86■■□□□ 1.09
CDKN1A-201ENST00000244741 EXOC5O00471 708 aa21.85■■□□□ 1.09
CDKN1A-201ENST00000244741 WDR63Q8IWG1 891 aa21.85■■□□□ 1.09
CDKN1A-201ENST00000244741 ERICH6Q7L0X2 663 aa21.85■■□□□ 1.09
CDKN1A-201ENST00000244741 DDB1Q16531 1140 aa21.84■■□□□ 1.09
CDKN1A-201ENST00000244741 BARGINQ6ZT62 677 aa21.84■■□□□ 1.09
CDKN1A-201ENST00000244741 TRMT2AQ8IZ69 625 aaKnown RBP21.84■■□□□ 1.09
CDKN1A-201ENST00000244741 PCDH11XQ9BZA7 1347 aa21.84■■□□□ 1.09
CDKN1A-201ENST00000244741 PCDH11YQ9BZA8 1340 aa21.84■■□□□ 1.09
CDKN1A-201ENST00000244741 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.84■■□□□ 1.09
CDKN1A-201ENST00000244741 ATRNO75882 1429 aa21.84■■□□□ 1.09
CDKN1A-201ENST00000244741 PKD1L3Q7Z443 1732 aa21.83■■□□□ 1.09
CDKN1A-201ENST00000244741 NCBP3Q53F19 620 aaKnown RBP21.82■■□□□ 1.08
CDKN1A-201ENST00000244741 GLI3P10071 1580 aa21.82■■□□□ 1.08
CDKN1A-201ENST00000244741 TCERG1O14776 1098 aaKnown RBP21.82■■□□□ 1.08
CDKN1A-201ENST00000244741 RNMTO43148 476 aaKnown RBP21.82■■□□□ 1.08
CDKN1A-201ENST00000244741 E9PSI1 815 aa21.81■■□□□ 1.08
CDKN1A-201ENST00000244741 WNK3Q9BYP7 1800 aa21.81■■□□□ 1.08
CDKN1A-201ENST00000244741 EP400Q96L91 3159 aa21.81■■□□□ 1.08
CDKN1A-201ENST00000244741 HTATSF1O43719 755 aaKnown RBP21.81■■□□□ 1.08
CDKN1A-201ENST00000244741 SHANK3Q9BYB0 1731 aa21.8■■□□□ 1.08
CDKN1A-201ENST00000244741 CDCA7Q9BWT1 371 aaPredicted RBP21.8■■□□□ 1.08
CDKN1A-201ENST00000244741 RGS17Q9UGC6 210 aaPredicted RBP21.8■■□□□ 1.08
CDKN1A-201ENST00000244741 KDM6AO15550 1401 aaPredicted RBP21.8■■□□□ 1.08
CDKN1A-201ENST00000244741 KAT6BQ8WYB5 2073 aa21.8■■□□□ 1.08
CDKN1A-201ENST00000244741 FAM182BQ5T319 152 aa21.8■■□□□ 1.08
CDKN1A-201ENST00000244741 ZNF772Q68DY9 489 aaPredicted RBP21.8■■□□□ 1.08
CDKN1A-201ENST00000244741 TEFQ10587 303 aa21.78■■□□□ 1.08
CDKN1A-201ENST00000244741 MBIPQ9NS73 344 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms