RNA–Protein interactions for RNA: ENST00000243040.10

PFDN5-201, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-201ENST00000243040 RAPGEF4Q8WZA2 1011 aa14.42□□□□□ -0.1
PFDN5-201ENST00000243040 BTAF1O14981 1849 aa14.41□□□□□ -0.1
PFDN5-201ENST00000243040 TATP17735 454 aaPredicted RBP14.41□□□□□ -0.1
PFDN5-201ENST00000243040 PARD3Q8TEW0 1356 aa14.41□□□□□ -0.1
PFDN5-201ENST00000243040 NUP188Q5SRE5 1749 aa14.41□□□□□ -0.1
PFDN5-201ENST00000243040 TOGARAM1Q9Y4F4 1720 aa14.41□□□□□ -0.1
PFDN5-201ENST00000243040 KDRP35968 1356 aa14.4□□□□□ -0.1
PFDN5-201ENST00000243040 TRIM37O94972 964 aa14.4□□□□□ -0.1
PFDN5-201ENST00000243040 BAG6P46379 1132 aa14.4□□□□□ -0.1
PFDN5-201ENST00000243040 ZCRB1Q8TBF4 217 aaKnown RBP14.4□□□□□ -0.1
PFDN5-201ENST00000243040 IL13P35225 146 aa14.39□□□□□ -0.11
PFDN5-201ENST00000243040 PCDH11XQ9BZA7 1347 aa14.39□□□□□ -0.11
PFDN5-201ENST00000243040 PCDH11YQ9BZA8 1340 aa14.39□□□□□ -0.11
PFDN5-201ENST00000243040 DEFB132Q7Z7B7 95 aa14.38□□□□□ -0.11
PFDN5-201ENST00000243040 ITGB4P16144 1822 aa14.38□□□□□ -0.11
PFDN5-201ENST00000243040 KAT6BQ8WYB5 2073 aa14.37□□□□□ -0.11
PFDN5-201ENST00000243040 BCL11BQ9C0K0 894 aaPredicted RBP14.37□□□□□ -0.11
PFDN5-201ENST00000243040 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.37□□□□□ -0.11
PFDN5-201ENST00000243040 VIRMAQ69YN4 1812 aaKnown RBP14.36□□□□□ -0.11
PFDN5-201ENST00000243040 PPP2R1AP30153 589 aa14.36□□□□□ -0.11
PFDN5-201ENST00000243040 DDX10Q13206 875 aaKnown RBP14.36□□□□□ -0.11
PFDN5-201ENST00000243040 CNGB1Q14028 1251 aaPredicted RBP14.36□□□□□ -0.11
PFDN5-201ENST00000243040 LY75O60449 1722 aa14.35□□□□□ -0.11
PFDN5-201ENST00000243040 DIAPH1O60610 1272 aaKnown RBP14.35□□□□□ -0.11
PFDN5-201ENST00000243040 DDX54Q8TDD1 881 aaKnown RBP14.35□□□□□ -0.11
PFDN5-201ENST00000243040 APBA3O96018 575 aa14.34□□□□□ -0.11
PFDN5-201ENST00000243040 EN1Q05925 392 aaPredicted RBP14.34□□□□□ -0.11
PFDN5-201ENST00000243040 CAMKK2Q96RR4 588 aa14.34□□□□□ -0.11
PFDN5-201ENST00000243040 SPG7Q9UQ90 795 aa14.34□□□□□ -0.11
PFDN5-201ENST00000243040 PLSCR1O15162 318 aa14.33□□□□□ -0.12
PFDN5-201ENST00000243040 CYP27B1O15528 508 aa14.33□□□□□ -0.12
PFDN5-201ENST00000243040 AEBP1Q8IUX7 1158 aa14.33□□□□□ -0.12
PFDN5-201ENST00000243040 SCN11AQ9UI33 1791 aa14.32□□□□□ -0.12
PFDN5-201ENST00000243040 KCNQ2O43526 872 aa14.32□□□□□ -0.12
PFDN5-201ENST00000243040 EZH2Q15910 746 aaKnown RBP14.32□□□□□ -0.12
PFDN5-201ENST00000243040 SULT6B1Q6IMI4 303 aa14.32□□□□□ -0.12
PFDN5-201ENST00000243040 PTF1AQ7RTS3 328 aa14.32□□□□□ -0.12
PFDN5-201ENST00000243040 ACSBG1Q96GR2 724 aa14.32□□□□□ -0.12
PFDN5-201ENST00000243040 CFAP53Q96M91 514 aa14.32□□□□□ -0.12
PFDN5-201ENST00000243040 ADAMTS7Q9UKP4 1686 aa14.32□□□□□ -0.12
PFDN5-201ENST00000243040 PAPPAQ13219 1627 aa14.31□□□□□ -0.12
PFDN5-201ENST00000243040 ZNF316A6NFI3 1004 aaPredicted RBP14.31□□□□□ -0.12
PFDN5-201ENST00000243040 NKX1-1Q15270 411 aaPredicted RBP14.31□□□□□ -0.12
PFDN5-201ENST00000243040 RALBP1Q15311 655 aa14.31□□□□□ -0.12
PFDN5-201ENST00000243040 AMOTQ4VCS5 1084 aa14.31□□□□□ -0.12
PFDN5-201ENST00000243040 PHKG2P15735 406 aa14.3□□□□□ -0.12
PFDN5-201ENST00000243040 IFNL2Q8IZJ0 200 aa14.3□□□□□ -0.12
PFDN5-201ENST00000243040 PLEKHO1Q53GL0 409 aaPredicted RBP14.29□□□□□ -0.12
PFDN5-201ENST00000243040 KDM6AO15550 1401 aaPredicted RBP14.27□□□□□ -0.12
PFDN5-201ENST00000243040 MYBBP1AQ9BQG0 1328 aaKnown RBP14.27□□□□□ -0.12
PFDN5-201ENST00000243040 HMOX1P09601 288 aa14.27□□□□□ -0.13
PFDN5-201ENST00000243040 PRIM1P49642 420 aaKnown RBP14.27□□□□□ -0.13
PFDN5-201ENST00000243040 NUDCQ9Y266 331 aa14.27□□□□□ -0.13
PFDN5-201ENST00000243040 TAF1LQ8IZX4 1826 aa14.27□□□□□ -0.13
PFDN5-201ENST00000243040 QSER1Q2KHR3 1735 aa14.27□□□□□ -0.13
PFDN5-201ENST00000243040 MRC1P22897 1456 aa14.26□□□□□ -0.13
PFDN5-201ENST00000243040 U2SURPO15042 1029 aaKnown RBP14.26□□□□□ -0.13
PFDN5-201ENST00000243040 HSP90AB1P08238 724 aaKnown RBP14.26□□□□□ -0.13
PFDN5-201ENST00000243040 ZNF530Q6P9A1 599 aaPredicted RBP14.26□□□□□ -0.13
PFDN5-201ENST00000243040 ZNF831Q5JPB2 1677 aa14.26□□□□□ -0.13
PFDN5-201ENST00000243040 SYTL4Q96C24 671 aaPredicted RBP14.25□□□□□ -0.13
PFDN5-201ENST00000243040 PRKRIP1Q9H875 184 aaPredicted RBP14.25□□□□□ -0.13
PFDN5-201ENST00000243040 C5P01031 1676 aa14.25□□□□□ -0.13
PFDN5-201ENST00000243040 SIPA1L3O60292 1781 aaPredicted RBP14.24□□□□□ -0.13
PFDN5-201ENST00000243040 TXNRD1Q16881 649 aa14.24□□□□□ -0.13
PFDN5-201ENST00000243040 PROM2Q8N271 834 aa14.24□□□□□ -0.13
PFDN5-201ENST00000243040 DCAF5Q96JK2 942 aa14.24□□□□□ -0.13
PFDN5-201ENST00000243040 RSPH6AQ9H0K4 717 aa14.24□□□□□ -0.13
PFDN5-201ENST00000243040 TUBGCP6Q96RT7 1819 aa14.24□□□□□ -0.13
PFDN5-201ENST00000243040 DLG5Q8TDM6 1919 aa14.23□□□□□ -0.13
PFDN5-201ENST00000243040 CICQ96RK0 1608 aaPredicted RBP14.23□□□□□ -0.13
PFDN5-201ENST00000243040 AKAP4Q5JQC9 854 aa14.23□□□□□ -0.13
PFDN5-201ENST00000243040 C1orf141Q5JVX7 400 aa14.23□□□□□ -0.13
PFDN5-201ENST00000243040 CASZ1Q86V15 1759 aa14.23□□□□□ -0.13
PFDN5-201ENST00000243040 ERVV-2B6SEH9 535 aa14.22□□□□□ -0.13
PFDN5-201ENST00000243040 LRP5O75197 1615 aa14.22□□□□□ -0.13
PFDN5-201ENST00000243040 FCHSD2O94868 740 aa14.21□□□□□ -0.13
PFDN5-201ENST00000243040 U2AF1L5P0DN76 240 aaPredicted RBP14.21□□□□□ -0.13
PFDN5-201ENST00000243040 U2AF1Q01081 240 aaKnown RBP eCLIP14.21□□□□□ -0.13
PFDN5-201ENST00000243040 MTHFSDQ2M296 383 aaKnown RBP14.21□□□□□ -0.13
PFDN5-201ENST00000243040 SLC27A3Q5K4L6 730 aa14.21□□□□□ -0.13
PFDN5-201ENST00000243040 MPRIPQ6WCQ1 1025 aa14.21□□□□□ -0.13
PFDN5-201ENST00000243040 PALLDQ8WX93 1383 aa14.21□□□□□ -0.14
PFDN5-201ENST00000243040 PRKAR2BP31323 418 aa14.2□□□□□ -0.14
PFDN5-201ENST00000243040 NBPF14Q5TI25 921 aa14.2□□□□□ -0.14
PFDN5-201ENST00000243040 GAS2L2Q8NHY3 880 aa14.2□□□□□ -0.14
PFDN5-201ENST00000243040 PIGBQ92521 554 aa14.2□□□□□ -0.14
PFDN5-201ENST00000243040 ANO8Q9HCE9 1232 aaPredicted RBP14.2□□□□□ -0.14
PFDN5-201ENST00000243040 TMOD3Q9NYL9 352 aa14.2□□□□□ -0.14
PFDN5-201ENST00000243040 COL5A3P25940 1745 aaPredicted RBP14.2□□□□□ -0.14
PFDN5-201ENST00000243040 MAP3K5Q99683 1374 aa14.2□□□□□ -0.14
PFDN5-201ENST00000243040 UBR2Q8IWV8 1755 aa14.19□□□□□ -0.14
PFDN5-201ENST00000243040 SMARCC1Q92922 1105 aaPredicted RBP14.19□□□□□ -0.14
PFDN5-201ENST00000243040 LRRC4BQ9NT99 713 aa14.19□□□□□ -0.14
PFDN5-201ENST00000243040 C4BP0C0L5 1744 aa14.18□□□□□ -0.14
PFDN5-201ENST00000243040 R3HDM1Q15032 1099 aaKnown RBP14.17□□□□□ -0.14
PFDN5-201ENST00000243040 TJP1Q07157 1748 aa14.17□□□□□ -0.14
PFDN5-201ENST00000243040 UBR3Q6ZT12 1888 aa14.16□□□□□ -0.14
PFDN5-201ENST00000243040 PSDA5PKW4 1024 aaPredicted RBP14.16□□□□□ -0.14
PFDN5-201ENST00000243040 RNMTO43148 476 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms