RNA–Protein interactions for RNA: ENST00000239849.8

TNFSF11-201, Transcript of TNF superfamily member 11, humanhuman

TSL 5 BASIC

Gene TNFSF11, Length 911 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-201ENST00000239849 PRIM1P49642 420 aaKnown RBP18.74■□□□□ 0.59
TNFSF11-201ENST00000239849 KCNQ4P56696 695 aa18.74■□□□□ 0.59
TNFSF11-201ENST00000239849 RBM46Q8TBY0 533 aaKnown RBP18.74■□□□□ 0.59
TNFSF11-201ENST00000239849 USP47Q96K76 1375 aa18.73■□□□□ 0.59
TNFSF11-201ENST00000239849 C16orf71Q8IYS4 520 aaPredicted RBP18.73■□□□□ 0.59
TNFSF11-201ENST00000239849 ANKRD24Q8TF21 1146 aa18.73■□□□□ 0.59
TNFSF11-201ENST00000239849 EVC2Q86UK5 1308 aa18.73■□□□□ 0.59
TNFSF11-201ENST00000239849 WDR90Q96KV7 1748 aa18.72■□□□□ 0.59
TNFSF11-201ENST00000239849 FSTL1Q12841 308 aa18.72■□□□□ 0.59
TNFSF11-201ENST00000239849 LY75O60449 1722 aa18.71■□□□□ 0.59
TNFSF11-201ENST00000239849 SLC34A2O95436 690 aa18.7■□□□□ 0.58
TNFSF11-201ENST00000239849 CICQ96RK0 1608 aaPredicted RBP18.7■□□□□ 0.58
TNFSF11-201ENST00000239849 NSD3Q9BZ95 1437 aa18.68■□□□□ 0.58
TNFSF11-201ENST00000239849 WWC3Q9ULE0 1092 aa18.68■□□□□ 0.58
TNFSF11-201ENST00000239849 NSD2O96028 1365 aa18.68■□□□□ 0.58
TNFSF11-201ENST00000239849 KTN1Q86UP2 1357 aaKnown RBP18.68■□□□□ 0.58
TNFSF11-201ENST00000239849 USP31Q70CQ4 1352 aa18.67■□□□□ 0.58
TNFSF11-201ENST00000239849 NBPF1Q3BBV0 1214 aa18.65■□□□□ 0.58
TNFSF11-201ENST00000239849 NMRK2Q9NPI5 230 aa18.64■□□□□ 0.57
TNFSF11-201ENST00000239849 ZCRB1Q8TBF4 217 aaKnown RBP18.63■□□□□ 0.57
TNFSF11-201ENST00000239849 AK7Q96M32 723 aa18.63■□□□□ 0.57
TNFSF11-201ENST00000239849 PLEKHG2Q9H7P9 1386 aa18.63■□□□□ 0.57
TNFSF11-201ENST00000239849 DOT1LQ8TEK3 1739 aa18.63■□□□□ 0.57
TNFSF11-201ENST00000239849 PCDH10Q9P2E7 1040 aa18.62■□□□□ 0.57
TNFSF11-201ENST00000239849 FAM208AQ9UK61 1670 aaKnown RBP18.61■□□□□ 0.57
TNFSF11-201ENST00000239849 RAB3GAP2Q9H2M9 1393 aa18.61■□□□□ 0.57
TNFSF11-201ENST00000239849 KDM2BQ8NHM5 1336 aa18.61■□□□□ 0.57
TNFSF11-201ENST00000239849 KAT6BQ8WYB5 2073 aa18.61■□□□□ 0.57
TNFSF11-201ENST00000239849 C5P01031 1676 aa18.6■□□□□ 0.57
TNFSF11-201ENST00000239849 HTRA3P83110 453 aa18.6■□□□□ 0.57
TNFSF11-201ENST00000239849 USP54Q70EL1 1684 aa18.6■□□□□ 0.57
TNFSF11-201ENST00000239849 TGFB2P61812 414 aa18.59■□□□□ 0.57
TNFSF11-201ENST00000239849 C10orf71Q711Q0 1435 aa18.58■□□□□ 0.57
TNFSF11-201ENST00000239849 CGNL1Q0VF96 1302 aa18.58■□□□□ 0.57
TNFSF11-201ENST00000239849 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.58■□□□□ 0.56
TNFSF11-201ENST00000239849 SMC1BQ8NDV3 1235 aa18.58■□□□□ 0.56
TNFSF11-201ENST00000239849 IP6K1Q92551 441 aa18.58■□□□□ 0.56
TNFSF11-201ENST00000239849 PALLDQ8WX93 1383 aa18.57■□□□□ 0.56
TNFSF11-201ENST00000239849 HSPA1AP0DMV8 641 aaKnown RBP18.57■□□□□ 0.56
TNFSF11-201ENST00000239849 HSPA1BP0DMV9 641 aaKnown RBP18.57■□□□□ 0.56
TNFSF11-201ENST00000239849 SSFA2P28290 1259 aa18.57■□□□□ 0.56
TNFSF11-201ENST00000239849 ARHGAP27Q6ZUM4 889 aa18.57■□□□□ 0.56
TNFSF11-201ENST00000239849 BCS1LQ9Y276 419 aa18.57■□□□□ 0.56
TNFSF11-201ENST00000239849 LTN1O94822 1766 aa18.57■□□□□ 0.56
TNFSF11-201ENST00000239849 SMARCC1Q92922 1105 aaPredicted RBP18.56■□□□□ 0.56
TNFSF11-201ENST00000239849 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.55■□□□□ 0.56
TNFSF11-201ENST00000239849 PHF14O94880 888 aa18.54■□□□□ 0.56
TNFSF11-201ENST00000239849 NME9Q86XW9 330 aa18.54■□□□□ 0.56
TNFSF11-201ENST00000239849 LTV1Q96GA3 475 aaPredicted RBP18.54■□□□□ 0.56
TNFSF11-201ENST00000239849 PXDNLA1KZ92 1463 aa18.53■□□□□ 0.56
TNFSF11-201ENST00000239849 C4BP0C0L5 1744 aa18.52■□□□□ 0.56
TNFSF11-201ENST00000239849 MON2Q7Z3U7 1717 aa18.52■□□□□ 0.56
TNFSF11-201ENST00000239849 HDGFL2Q7Z4V5 671 aaPredicted RBP18.52■□□□□ 0.56
TNFSF11-201ENST00000239849 C9orf131Q5VYM1 1079 aa18.51■□□□□ 0.55
TNFSF11-201ENST00000239849 FCHSD2O94868 740 aa18.5■□□□□ 0.55
TNFSF11-201ENST00000239849 SBNO2Q9Y2G9 1366 aa18.5■□□□□ 0.55
TNFSF11-201ENST00000239849 MPRIPQ6WCQ1 1025 aa18.49■□□□□ 0.55
TNFSF11-201ENST00000239849 RAPGEF4Q8WZA2 1011 aa18.49■□□□□ 0.55
TNFSF11-201ENST00000239849 MEGF6O75095 1541 aa18.49■□□□□ 0.55
TNFSF11-201ENST00000239849 PCDH11XQ9BZA7 1347 aa18.49■□□□□ 0.55
TNFSF11-201ENST00000239849 PCDH11YQ9BZA8 1340 aa18.49■□□□□ 0.55
TNFSF11-201ENST00000239849 MMP10P09238 476 aa18.48■□□□□ 0.55
TNFSF11-201ENST00000239849 RRAGCQ9HB90 399 aa18.48■□□□□ 0.55
TNFSF11-201ENST00000239849 EDC4Q6P2E9 1401 aaKnown RBP18.48■□□□□ 0.55
TNFSF11-201ENST00000239849 CCDC87Q9NVE4 849 aa18.47■□□□□ 0.55
TNFSF11-201ENST00000239849 KCPQ6ZWJ8 1503 aa18.47■□□□□ 0.55
TNFSF11-201ENST00000239849 TAF1LQ8IZX4 1826 aa18.46■□□□□ 0.55
TNFSF11-201ENST00000239849 A0A0G2JLW4 131 aa18.46■□□□□ 0.55
TNFSF11-201ENST00000239849 AMPHP49418 695 aa18.46■□□□□ 0.55
TNFSF11-201ENST00000239849 NLGN1Q8N2Q7 840 aa18.46■□□□□ 0.55
TNFSF11-201ENST00000239849 ZC3H4Q9UPT8 1303 aaKnown RBP18.46■□□□□ 0.55
TNFSF11-201ENST00000239849 TNRC6CQ9HCJ0 1690 aaKnown RBP18.45■□□□□ 0.54
TNFSF11-201ENST00000239849 TATP17735 454 aaPredicted RBP18.45■□□□□ 0.54
TNFSF11-201ENST00000239849 TERF2IPQ9NYB0 399 aa18.45■□□□□ 0.54
TNFSF11-201ENST00000239849 PCNTO95613 3336 aa18.44■□□□□ 0.54
TNFSF11-201ENST00000239849 TOGARAM1Q9Y4F4 1720 aa18.44■□□□□ 0.54
TNFSF11-201ENST00000239849 SMG6Q86US8 1419 aaKnown RBP18.44■□□□□ 0.54
TNFSF11-201ENST00000239849 HOXC9P31274 260 aa18.44■□□□□ 0.54
TNFSF11-201ENST00000239849 AMIGO3Q86WK7 504 aa18.44■□□□□ 0.54
TNFSF11-201ENST00000239849 RNF181Q9P0P0 153 aa18.44■□□□□ 0.54
TNFSF11-201ENST00000239849 GNPATO15228 680 aa18.43■□□□□ 0.54
TNFSF11-201ENST00000239849 KIF13BQ9NQT8 1826 aa18.43■□□□□ 0.54
TNFSF11-201ENST00000239849 UBR3Q6ZT12 1888 aa18.43■□□□□ 0.54
TNFSF11-201ENST00000239849 DPEP1P16444 411 aa18.42■□□□□ 0.54
TNFSF11-201ENST00000239849 TMC1Q8TDI8 760 aa18.42■□□□□ 0.54
TNFSF11-201ENST00000239849 PIM2Q9P1W9 311 aa18.42■□□□□ 0.54
TNFSF11-201ENST00000239849 RTL1A6NKG5 1358 aa18.42■□□□□ 0.54
TNFSF11-201ENST00000239849 CD163L1Q9NR16 1453 aa18.41■□□□□ 0.54
TNFSF11-201ENST00000239849 LOC102724428A0A0B4J2F2 783 aa18.41■□□□□ 0.54
TNFSF11-201ENST00000239849 SIK1P57059 783 aa18.41■□□□□ 0.54
TNFSF11-201ENST00000239849 TMF1P82094 1093 aa18.41■□□□□ 0.54
TNFSF11-201ENST00000239849 MAP3K19Q56UN5 1328 aa18.41■□□□□ 0.54
TNFSF11-201ENST00000239849 VEGFAP15692 232 aaPredicted RBP18.4■□□□□ 0.54
TNFSF11-201ENST00000239849 DALRD3Q5D0E6 543 aaKnown RBP18.4■□□□□ 0.54
TNFSF11-201ENST00000239849 COG3Q96JB2 828 aa18.4■□□□□ 0.54
TNFSF11-201ENST00000239849 DCAF5Q96JK2 942 aa18.4■□□□□ 0.54
TNFSF11-201ENST00000239849 PRDM10Q9NQV6 1147 aa18.4■□□□□ 0.54
TNFSF11-201ENST00000239849 PARP3Q9Y6F1 533 aa18.4■□□□□ 0.54
TNFSF11-201ENST00000239849 PKD1L3Q7Z443 1732 aa18.4■□□□□ 0.54
TNFSF11-201ENST00000239849 KIAA1551Q9HCM1 1747 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms