RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 NUTM2GQ5VZR2 741 aa13.16□□□□□ -0.3
CCDC170-201ENST00000239374 WAPLQ7Z5K2 1190 aa13.16□□□□□ -0.3
CCDC170-201ENST00000239374 RBSNQ9H1K0 784 aa13.16□□□□□ -0.3
CCDC170-201ENST00000239374 NUP62CLQ9H1M0 184 aa13.16□□□□□ -0.3
CCDC170-201ENST00000239374 USP19O94966 1318 aa13.16□□□□□ -0.3
CCDC170-201ENST00000239374 ADAMTS12P58397 1594 aa13.15□□□□□ -0.3
CCDC170-201ENST00000239374 MBD5Q9P267 1494 aa13.15□□□□□ -0.3
CCDC170-201ENST00000239374 SRGAP3O43295 1099 aa13.15□□□□□ -0.3
CCDC170-201ENST00000239374 RTEL1-TNFRSF6BF6WH68 1400 aa13.15□□□□□ -0.3
CCDC170-201ENST00000239374 HCLS1P14317 486 aaPredicted RBP13.15□□□□□ -0.3
CCDC170-201ENST00000239374 CAMK4Q16566 473 aa13.15□□□□□ -0.3
CCDC170-201ENST00000239374 CCDC83Q8IWF9 413 aa13.15□□□□□ -0.3
CCDC170-201ENST00000239374 KIF21AQ7Z4S6 1674 aa13.15□□□□□ -0.3
CCDC170-201ENST00000239374 CASTP20810 708 aaKnown RBP13.15□□□□□ -0.3
CCDC170-201ENST00000239374 PDRG1Q9NUG6 133 aa13.15□□□□□ -0.3
CCDC170-201ENST00000239374 NEXNQ0ZGT2 675 aa13.15□□□□□ -0.3
CCDC170-201ENST00000239374 DDX54Q8TDD1 881 aaKnown RBP13.14□□□□□ -0.31
CCDC170-201ENST00000239374 EID1Q9Y6B2 187 aa13.14□□□□□ -0.31
CCDC170-201ENST00000239374 DUOX2Q9NRD8 1548 aa13.14□□□□□ -0.31
CCDC170-201ENST00000239374 VAMP4O75379 141 aa13.14□□□□□ -0.31
CCDC170-201ENST00000239374 HS1BP3Q53T59 392 aa13.14□□□□□ -0.31
CCDC170-201ENST00000239374 C1orf141Q5JVX7 400 aa13.14□□□□□ -0.31
CCDC170-201ENST00000239374 C8orf58Q8NAV2 365 aa13.14□□□□□ -0.31
CCDC170-201ENST00000239374 PLEKHM2Q8IWE5 1019 aa13.14□□□□□ -0.31
CCDC170-201ENST00000239374 FMNL2Q96PY5 1086 aa13.14□□□□□ -0.31
CCDC170-201ENST00000239374 MEIS3Q99687 375 aa13.14□□□□□ -0.31
CCDC170-201ENST00000239374 ANKRD36BQ8N2N9 1353 aa13.14□□□□□ -0.31
CCDC170-201ENST00000239374 ZBTB7BO15156 539 aaPredicted RBP13.13□□□□□ -0.31
CCDC170-201ENST00000239374 RAPGEF3O95398 923 aa13.13□□□□□ -0.31
CCDC170-201ENST00000239374 AIMP1Q12904 312 aaKnown RBP13.13□□□□□ -0.31
CCDC170-201ENST00000239374 CREBRFQ8IUR6 639 aa13.13□□□□□ -0.31
CCDC170-201ENST00000239374 KINO60870 393 aaKnown RBP13.13□□□□□ -0.31
CCDC170-201ENST00000239374 MNS1Q8NEH6 495 aa13.13□□□□□ -0.31
CCDC170-201ENST00000239374 MAP3K11Q16584 847 aa13.13□□□□□ -0.31
CCDC170-201ENST00000239374 CSB-PGBD3P0DP91 1061 aa13.13□□□□□ -0.31
CCDC170-201ENST00000239374 NLRP6P59044 892 aa13.13□□□□□ -0.31
CCDC170-201ENST00000239374 ANKRD44Q8N8A2 993 aa13.12□□□□□ -0.31
CCDC170-201ENST00000239374 SPATA32Q96LK8 384 aa13.12□□□□□ -0.31
CCDC170-201ENST00000239374 TTC12Q9H892 705 aaPredicted RBP13.12□□□□□ -0.31
CCDC170-201ENST00000239374 ABCA5Q8WWZ7 1642 aa13.12□□□□□ -0.31
CCDC170-201ENST00000239374 CPLX1O14810 134 aa13.12□□□□□ -0.31
CCDC170-201ENST00000239374 TEX35Q5T0J7 233 aa13.12□□□□□ -0.31
CCDC170-201ENST00000239374 FILIP1Q7Z7B0 1213 aa13.12□□□□□ -0.31
CCDC170-201ENST00000239374 USP26Q9BXU7 913 aa13.12□□□□□ -0.31
CCDC170-201ENST00000239374 DCTPP1Q9H773 170 aa13.12□□□□□ -0.31
CCDC170-201ENST00000239374 PPP4R3BQ5MIZ7 849 aa13.12□□□□□ -0.31
CCDC170-201ENST00000239374 NOL7Q9UMY1 257 aaKnown RBP13.12□□□□□ -0.31
CCDC170-201ENST00000239374 TAF7LQ5H9L4 462 aa13.12□□□□□ -0.31
CCDC170-201ENST00000239374 DDX58O95786 925 aaKnown RBP13.11□□□□□ -0.31
CCDC170-201ENST00000239374 IDI1Q13907 227 aa13.11□□□□□ -0.31
CCDC170-201ENST00000239374 NOLC1Q14978 699 aaKnown RBP eCLIP13.11□□□□□ -0.31
CCDC170-201ENST00000239374 CHMP4CQ96CF2 233 aa13.11□□□□□ -0.31
CCDC170-201ENST00000239374 NAT10Q9H0A0 1025 aaKnown RBP13.11□□□□□ -0.31
CCDC170-201ENST00000239374 TRIM35Q9UPQ4 493 aa13.11□□□□□ -0.31
CCDC170-201ENST00000239374 ZSCAN31Q96LW9 406 aaPredicted RBP13.11□□□□□ -0.31
CCDC170-201ENST00000239374 ZNF692Q9BU19 519 aaPredicted RBP13.11□□□□□ -0.31
CCDC170-201ENST00000239374 SPDYE4A6NLX3 237 aa13.11□□□□□ -0.31
CCDC170-201ENST00000239374 PDE1AP54750 535 aa13.11□□□□□ -0.31
CCDC170-201ENST00000239374 ARGLU1Q9NWB6 273 aaPredicted RBP13.11□□□□□ -0.31
CCDC170-201ENST00000239374 BLOC1S2Q6QNY1 142 aa13.11□□□□□ -0.31
CCDC170-201ENST00000239374 GOLGA6L1Q8N7Z2 621 aa13.11□□□□□ -0.31
CCDC170-201ENST00000239374 PODXL2Q9NZ53 605 aa13.11□□□□□ -0.31
CCDC170-201ENST00000239374 SMC2O95347 1197 aa13.1□□□□□ -0.31
CCDC170-201ENST00000239374 GIMAP6Q6P9H5 292 aa13.1□□□□□ -0.31
CCDC170-201ENST00000239374 USP48Q86UV5 1035 aa13.1□□□□□ -0.31
CCDC170-201ENST00000239374 CCDC34Q96HJ3 373 aa13.1□□□□□ -0.31
CCDC170-201ENST00000239374 PHACTR3Q96KR7 559 aa13.1□□□□□ -0.31
CCDC170-201ENST00000239374 PRIMPOLQ96LW4 560 aa13.1□□□□□ -0.31
CCDC170-201ENST00000239374 LIMCH1Q9UPQ0 1083 aa13.1□□□□□ -0.31
CCDC170-201ENST00000239374 STX6O43752 255 aa13.1□□□□□ -0.31
CCDC170-201ENST00000239374 PRPF40BQ6NWY9 871 aaKnown RBP13.1□□□□□ -0.31
CCDC170-201ENST00000239374 CCDC61Q9Y6R9 512 aa13.1□□□□□ -0.31
CCDC170-201ENST00000239374 CKAP2LQ8IYA6 745 aa13.1□□□□□ -0.31
CCDC170-201ENST00000239374 OTUD7AQ8TE49 926 aaPredicted RBP13.1□□□□□ -0.31
CCDC170-201ENST00000239374 NUDT16Q96DE0 195 aaKnown RBP13.1□□□□□ -0.31
CCDC170-201ENST00000239374 LRRFIP2Q9Y608 721 aaKnown RBP13.1□□□□□ -0.31
CCDC170-201ENST00000239374 C16orf45Q96MC5 204 aaPredicted RBP13.1□□□□□ -0.31
CCDC170-201ENST00000239374 TRAPPC8Q9Y2L5 1435 aa13.09□□□□□ -0.31
CCDC170-201ENST00000239374 CCDC66A2RUB6 948 aa13.09□□□□□ -0.31
CCDC170-201ENST00000239374 ZNF445P59923 1031 aa13.09□□□□□ -0.31
CCDC170-201ENST00000239374 UVSSAQ2YD98 709 aa13.09□□□□□ -0.31
CCDC170-201ENST00000239374 TOMM22Q9NS69 142 aa13.09□□□□□ -0.31
CCDC170-201ENST00000239374 SPG7Q9UQ90 795 aa13.09□□□□□ -0.31
CCDC170-201ENST00000239374 PTPRCP08575 1304 aa13.09□□□□□ -0.31
CCDC170-201ENST00000239374 SYNE3Q6ZMZ3 975 aa13.09□□□□□ -0.31
CCDC170-201ENST00000239374 PPP6R1Q9UPN7 881 aa13.09□□□□□ -0.31
CCDC170-201ENST00000239374 HIP1O00291 1037 aa13.08□□□□□ -0.31
CCDC170-201ENST00000239374 CNPY2Q9Y2B0 182 aa13.08□□□□□ -0.31
CCDC170-201ENST00000239374 UBE2HP62256 183 aa13.08□□□□□ -0.32
CCDC170-201ENST00000239374 RIC3Q7Z5B4 369 aa13.08□□□□□ -0.32
CCDC170-201ENST00000239374 ESYT1Q9BSJ8 1104 aa13.08□□□□□ -0.32
CCDC170-201ENST00000239374 ANKRD1Q15327 319 aa13.08□□□□□ -0.32
CCDC170-201ENST00000239374 SIL1Q9H173 461 aa13.08□□□□□ -0.32
CCDC170-201ENST00000239374 LMBRD1Q9NUN5 540 aa13.08□□□□□ -0.32
CCDC170-201ENST00000239374 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.08□□□□□ -0.32
CCDC170-201ENST00000239374 ZMYM3Q14202 1370 aa13.08□□□□□ -0.32
CCDC170-201ENST00000239374 AACSQ86V21 672 aa13.08□□□□□ -0.32
CCDC170-201ENST00000239374 KIF1BPQ96EK5 621 aa13.08□□□□□ -0.32
CCDC170-201ENST00000239374 NEUROD6Q96NK8 337 aa13.08□□□□□ -0.32
CCDC170-201ENST00000239374 ADGRL1O94910 1474 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms