RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 BAG4O95429 457 aaKnown RBP8.72□□□□□ -1.01
MED28-201ENST00000237380 TSG101Q99816 390 aa8.72□□□□□ -1.01
MED28-201ENST00000237380 IFIT1P09914 478 aaKnown RBP8.72□□□□□ -1.01
MED28-201ENST00000237380 TMEM266Q2M3C6 531 aa8.72□□□□□ -1.01
MED28-201ENST00000237380 HAUS2Q9NVX0 235 aa8.72□□□□□ -1.01
MED28-201ENST00000237380 RRP7AQ9Y3A4 280 aaKnown RBP8.72□□□□□ -1.01
MED28-201ENST00000237380 HLA-DOAP06340 250 aa8.72□□□□□ -1.01
MED28-201ENST00000237380 CASKIN1Q8WXD9 1431 aa8.72□□□□□ -1.01
MED28-201ENST00000237380 MBD3O95983 291 aa8.72□□□□□ -1.01
MED28-201ENST00000237380 SREK1Q8WXA9 508 aaKnown RBP8.72□□□□□ -1.01
MED28-201ENST00000237380 TOP2BQ02880 1626 aa8.72□□□□□ -1.01
MED28-201ENST00000237380 CDC45O75419 566 aa8.72□□□□□ -1.01
MED28-201ENST00000237380 TDO2P48775 406 aa8.72□□□□□ -1.01
MED28-201ENST00000237380 CEP126Q9P2H0 1117 aa8.72□□□□□ -1.01
MED28-201ENST00000237380 RBM27Q9P2N5 1060 aaKnown RBP8.72□□□□□ -1.01
MED28-201ENST00000237380 CCDC181Q5TID7 509 aa8.71□□□□□ -1.01
MED28-201ENST00000237380 RNF41Q9H4P4 317 aaPredicted RBP8.71□□□□□ -1.01
MED28-201ENST00000237380 LRP2BPQ9P2M1 347 aa8.71□□□□□ -1.01
MED28-201ENST00000237380 BAG3O95817 575 aa8.71□□□□□ -1.01
MED28-201ENST00000237380 CEP57L1Q8IYX8 460 aa8.71□□□□□ -1.01
MED28-201ENST00000237380 HOOK2Q96ED9 719 aa8.71□□□□□ -1.01
MED28-201ENST00000237380 SLU7O95391 586 aaKnown RBP8.71□□□□□ -1.01
MED28-201ENST00000237380 ANKIB1Q9P2G1 1089 aa8.71□□□□□ -1.01
MED28-201ENST00000237380 VPS37CA5D8V6 355 aaPredicted RBP8.71□□□□□ -1.01
MED28-201ENST00000237380 PPFIBP1Q86W92 1011 aa8.71□□□□□ -1.01
MED28-201ENST00000237380 TNPO1Q92973 898 aaKnown RBP8.71□□□□□ -1.01
MED28-201ENST00000237380 UTP14AQ9BVJ6 771 aaKnown RBP8.71□□□□□ -1.01
MED28-201ENST00000237380 NOC2LQ9Y3T9 749 aaKnown RBP8.71□□□□□ -1.01
MED28-201ENST00000237380 VIMP08670 466 aaKnown RBP8.71□□□□□ -1.02
MED28-201ENST00000237380 TSHZ2Q9NRE2 1034 aa8.71□□□□□ -1.02
MED28-201ENST00000237380 ANKRD50Q9ULJ7 1429 aa8.71□□□□□ -1.02
MED28-201ENST00000237380 CABP5Q9NP86 173 aa8.71□□□□□ -1.02
MED28-201ENST00000237380 FGD6Q6ZV73 1430 aa8.71□□□□□ -1.02
MED28-201ENST00000237380 MCM3P25205 808 aa8.71□□□□□ -1.02
MED28-201ENST00000237380 BMS1Q14692 1282 aaKnown RBP8.71□□□□□ -1.02
MED28-201ENST00000237380 CASTP20810 708 aaKnown RBP8.71□□□□□ -1.02
MED28-201ENST00000237380 GZF1Q9H116 711 aaPredicted RBP8.71□□□□□ -1.02
MED28-201ENST00000237380 DDX54Q8TDD1 881 aaKnown RBP8.7□□□□□ -1.02
MED28-201ENST00000237380 CCDC39Q9UFE4 941 aa8.7□□□□□ -1.02
MED28-201ENST00000237380 USP5P45974 858 aa8.7□□□□□ -1.02
MED28-201ENST00000237380 ARHGEF6Q15052 776 aa8.7□□□□□ -1.02
MED28-201ENST00000237380 VSIG10Q8N0Z9 540 aa8.7□□□□□ -1.02
MED28-201ENST00000237380 CDC5LQ99459 802 aaKnown RBP8.7□□□□□ -1.02
MED28-201ENST00000237380 MSH6P52701 1360 aa8.7□□□□□ -1.02
MED28-201ENST00000237380 TTC12Q9H892 705 aaPredicted RBP8.7□□□□□ -1.02
MED28-201ENST00000237380 PRG4Q92954 1404 aaPredicted RBP8.7□□□□□ -1.02
MED28-201ENST00000237380 CCDC172P0C7W6 258 aa8.7□□□□□ -1.02
MED28-201ENST00000237380 CADPS2Q86UW7 1296 aa8.7□□□□□ -1.02
MED28-201ENST00000237380 DZIP1Q86YF9 867 aaKnown RBP8.7□□□□□ -1.02
MED28-201ENST00000237380 MKNK2Q9HBH9 465 aa8.7□□□□□ -1.02
MED28-201ENST00000237380 AKNAQ7Z591 1439 aa8.7□□□□□ -1.02
MED28-201ENST00000237380 GOLGA6L10A0A0M3HER8 536 aa8.69□□□□□ -1.02
MED28-201ENST00000237380 BTBD11A6QL63 1104 aa8.69□□□□□ -1.02
MED28-201ENST00000237380 LMOD1P29536 600 aaPredicted RBP8.69□□□□□ -1.02
MED28-201ENST00000237380 CCDC117Q8IWD4 279 aaPredicted RBP8.69□□□□□ -1.02
MED28-201ENST00000237380 SLC26A8Q96RN1 970 aa8.69□□□□□ -1.02
MED28-201ENST00000237380 TRIM5Q9C035 493 aa8.69□□□□□ -1.02
MED28-201ENST00000237380 ENOX2Q16206 610 aaKnown RBP8.69□□□□□ -1.02
MED28-201ENST00000237380 TANGO6Q9C0B7 1094 aa8.69□□□□□ -1.02
MED28-201ENST00000237380 TAOK3Q9H2K8 898 aa8.69□□□□□ -1.02
MED28-201ENST00000237380 TTF1Q15361 905 aaPredicted RBP8.69□□□□□ -1.02
MED28-201ENST00000237380 HDGFL1Q5TGJ6 251 aa8.69□□□□□ -1.02
MED28-201ENST00000237380 PPP1R42Q7Z4L9 355 aa8.69□□□□□ -1.02
MED28-201ENST00000237380 IQCA1Q86XH1 822 aa8.69□□□□□ -1.02
MED28-201ENST00000237380 IMMTQ16891 758 aaKnown RBP8.69□□□□□ -1.02
MED28-201ENST00000237380 PATL2C9JE40 543 aaKnown RBP8.69□□□□□ -1.02
MED28-201ENST00000237380 SLC5A1P13866 664 aa8.69□□□□□ -1.02
MED28-201ENST00000237380 ZNF444Q8N0Y2 327 aaPredicted RBP8.69□□□□□ -1.02
MED28-201ENST00000237380 POLR3DP05423 398 aaPredicted RBP8.69□□□□□ -1.02
MED28-201ENST00000237380 AMPD3Q01432 767 aa8.69□□□□□ -1.02
MED28-201ENST00000237380 OGFOD1Q8N543 542 aa8.69□□□□□ -1.02
MED28-201ENST00000237380 LRRC9Q6ZRR7 1453 aa8.69□□□□□ -1.02
MED28-201ENST00000237380 ELL2O00472 640 aaPredicted RBP8.68□□□□□ -1.02
MED28-201ENST00000237380 SMTNL1A8MU46 457 aa8.68□□□□□ -1.02
MED28-201ENST00000237380 SURF6O75683 361 aaKnown RBP8.68□□□□□ -1.02
MED28-201ENST00000237380 RAB11FIP3O75154 756 aa8.68□□□□□ -1.02
MED28-201ENST00000237380 TSNARE1Q96NA8 513 aa8.68□□□□□ -1.02
MED28-201ENST00000237380 MAP3K12Q12852 859 aa8.68□□□□□ -1.02
MED28-201ENST00000237380 STK38Q15208 465 aa8.68□□□□□ -1.02
MED28-201ENST00000237380 PDILTQ8N807 584 aa8.68□□□□□ -1.02
MED28-201ENST00000237380 SMARCC1Q92922 1105 aaPredicted RBP8.68□□□□□ -1.02
MED28-201ENST00000237380 CYP46A1Q9Y6A2 500 aa8.68□□□□□ -1.02
MED28-201ENST00000237380 U3KPZ7 1027 aaPredicted RBP8.68□□□□□ -1.02
MED28-201ENST00000237380 EXOC5O00471 708 aa8.68□□□□□ -1.02
MED28-201ENST00000237380 EIF3JO75822 258 aaKnown RBP8.68□□□□□ -1.02
MED28-201ENST00000237380 FMNL3Q8IVF7 1028 aa8.68□□□□□ -1.02
MED28-201ENST00000237380 ZHX3Q9H4I2 956 aa8.68□□□□□ -1.02
MED28-201ENST00000237380 NCAPD3P42695 1498 aa8.68□□□□□ -1.02
MED28-201ENST00000237380 SNAPC4Q5SXM2 1469 aa8.68□□□□□ -1.02
MED28-201ENST00000237380 RAI14Q9P0K7 980 aa8.68□□□□□ -1.02
MED28-201ENST00000237380 FAM135AQ9P2D6 1515 aa8.68□□□□□ -1.02
MED28-201ENST00000237380 ZBTB24O43167 697 aaPredicted RBP8.68□□□□□ -1.02
MED28-201ENST00000237380 PRC1O43663 620 aa8.68□□□□□ -1.02
MED28-201ENST00000237380 AIDAQ96BJ3 306 aa8.68□□□□□ -1.02
MED28-201ENST00000237380 NYXQ9GZU5 481 aa8.68□□□□□ -1.02
MED28-201ENST00000237380 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.67□□□□□ -1.02
MED28-201ENST00000237380 NECTIN2Q92692 538 aa8.67□□□□□ -1.02
MED28-201ENST00000237380 BRDTQ58F21 947 aaPredicted RBP8.67□□□□□ -1.02
MED28-201ENST00000237380 ZNF530Q6P9A1 599 aaPredicted RBP8.67□□□□□ -1.02
MED28-201ENST00000237380 KIF5BP33176 963 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms