RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 PHACTR3Q96KR7 559 aa14.38□□□□□ -0.11
TNFAIP3-201ENST00000237289 CRB1P82279 1406 aa14.37□□□□□ -0.11
TNFAIP3-201ENST00000237289 TOPAZ1Q8N9V7 1692 aa14.37□□□□□ -0.11
TNFAIP3-201ENST00000237289 E9PSI1 815 aa14.37□□□□□ -0.11
TNFAIP3-201ENST00000237289 DCTN1Q14203 1278 aa14.37□□□□□ -0.11
TNFAIP3-201ENST00000237289 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.36□□□□□ -0.11
TNFAIP3-201ENST00000237289 MON2Q7Z3U7 1717 aa14.36□□□□□ -0.11
TNFAIP3-201ENST00000237289 SEPT12Q8IYM1 358 aa14.35□□□□□ -0.11
TNFAIP3-201ENST00000237289 RBM42Q9BTD8 480 aaKnown RBP14.35□□□□□ -0.11
TNFAIP3-201ENST00000237289 ZNF330Q9Y3S2 320 aaPredicted RBP14.35□□□□□ -0.11
TNFAIP3-201ENST00000237289 BTBD11A6QL63 1104 aa14.35□□□□□ -0.11
TNFAIP3-201ENST00000237289 FNBP4Q8N3X1 1017 aaPredicted RBP14.35□□□□□ -0.11
TNFAIP3-201ENST00000237289 KIF20BQ96Q89 1820 aa14.35□□□□□ -0.11
TNFAIP3-201ENST00000237289 ELL2O00472 640 aaPredicted RBP14.35□□□□□ -0.11
TNFAIP3-201ENST00000237289 ACSBG1Q96GR2 724 aa14.35□□□□□ -0.11
TNFAIP3-201ENST00000237289 DCAF5Q96JK2 942 aa14.35□□□□□ -0.11
TNFAIP3-201ENST00000237289 THUMPD2Q9BTF0 503 aaKnown RBP14.35□□□□□ -0.11
TNFAIP3-201ENST00000237289 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.35□□□□□ -0.119e-7■■■□□ 15.3
TNFAIP3-201ENST00000237289 AKAP12Q02952 1782 aa14.35□□□□□ -0.11
TNFAIP3-201ENST00000237289 ZBED9Q6R2W3 1325 aa14.34□□□□□ -0.11
TNFAIP3-201ENST00000237289 HTATSF1O43719 755 aaKnown RBP14.34□□□□□ -0.11
TNFAIP3-201ENST00000237289 STK31Q9BXU1 1019 aa14.34□□□□□ -0.11
TNFAIP3-201ENST00000237289 SPATA31A1Q5TZJ5 1347 aa14.34□□□□□ -0.11
TNFAIP3-201ENST00000237289 TAF7Q15545 349 aaPredicted RBP14.33□□□□□ -0.11
TNFAIP3-201ENST00000237289 WDR63Q8IWG1 891 aa14.33□□□□□ -0.11
TNFAIP3-201ENST00000237289 WWC1Q8IX03 1113 aa14.33□□□□□ -0.12
TNFAIP3-201ENST00000237289 SPATA31A5Q5VU36 1347 aa14.33□□□□□ -0.12
TNFAIP3-201ENST00000237289 SPATA31A7Q8IWB4 1347 aa14.33□□□□□ -0.12
TNFAIP3-201ENST00000237289 MED1Q15648 1581 aaPredicted RBP14.33□□□□□ -0.12
TNFAIP3-201ENST00000237289 XIRP1Q702N8 1843 aaKnown RBP14.33□□□□□ -0.12
TNFAIP3-201ENST00000237289 MAP3K5Q99683 1374 aa14.32□□□□□ -0.12
TNFAIP3-201ENST00000237289 EIF2S2P20042 333 aaKnown RBP14.32□□□□□ -0.12
TNFAIP3-201ENST00000237289 PIK3C2AO00443 1686 aa14.32□□□□□ -0.12
TNFAIP3-201ENST00000237289 KRT27Q7Z3Y8 459 aa14.31□□□□□ -0.12
TNFAIP3-201ENST00000237289 PHKG2P15735 406 aa14.3□□□□□ -0.12
TNFAIP3-201ENST00000237289 BARGINQ6ZT62 677 aa14.3□□□□□ -0.12
TNFAIP3-201ENST00000237289 RNMTO43148 476 aaKnown RBP14.3□□□□□ -0.12
TNFAIP3-201ENST00000237289 PTCD1O75127 700 aaKnown RBP14.3□□□□□ -0.12
TNFAIP3-201ENST00000237289 MIS18AQ9NYP9 233 aa14.3□□□□□ -0.12
TNFAIP3-201ENST00000237289 SLIT3O75094 1523 aa14.3□□□□□ -0.12
TNFAIP3-201ENST00000237289 KAT6BQ8WYB5 2073 aa14.29□□□□□ -0.12
TNFAIP3-201ENST00000237289 HMGB2P26583 209 aaKnown RBP14.29□□□□□ -0.12
TNFAIP3-201ENST00000237289 NFATC2IPQ8NCF5 419 aa14.29□□□□□ -0.12
TNFAIP3-201ENST00000237289 COL5A2P05997 1499 aaPredicted RBP14.29□□□□□ -0.12
TNFAIP3-201ENST00000237289 FRAT1Q92837 279 aaPredicted RBP14.29□□□□□ -0.12
TNFAIP3-201ENST00000237289 FAM196AQ6ZSG2 479 aa14.28□□□□□ -0.12
TNFAIP3-201ENST00000237289 IFT57Q9NWB7 429 aa14.28□□□□□ -0.12
TNFAIP3-201ENST00000237289 NHSL1Q5SYE7 1610 aa14.28□□□□□ -0.12
TNFAIP3-201ENST00000237289 PRIM1P49642 420 aaKnown RBP14.27□□□□□ -0.12
TNFAIP3-201ENST00000237289 NECTIN2Q92692 538 aa14.27□□□□□ -0.12
TNFAIP3-201ENST00000237289 TSR2Q969E8 191 aaKnown RBP14.27□□□□□ -0.12
TNFAIP3-201ENST00000237289 SMARCC1Q92922 1105 aaPredicted RBP14.27□□□□□ -0.12
TNFAIP3-201ENST00000237289 PLEKHF1Q96S99 279 aa14.27□□□□□ -0.12
TNFAIP3-201ENST00000237289 MAP2P11137 1827 aaKnown RBP14.27□□□□□ -0.13
TNFAIP3-201ENST00000237289 LGR6Q9HBX8 967 aa14.27□□□□□ -0.13
TNFAIP3-201ENST00000237289 NPHP1O15259 732 aa14.26□□□□□ -0.13
TNFAIP3-201ENST00000237289 CCDC27Q2M243 656 aa14.26□□□□□ -0.13
TNFAIP3-201ENST00000237289 FAM182BQ5T319 152 aa14.26□□□□□ -0.13
TNFAIP3-201ENST00000237289 CFAP44Q96MT7 982 aa14.26□□□□□ -0.13
TNFAIP3-201ENST00000237289 CDCA7LQ96GN5 454 aa14.26□□□□□ -0.13
TNFAIP3-201ENST00000237289 SMC4Q9NTJ3 1288 aa14.26□□□□□ -0.13
TNFAIP3-201ENST00000237289 COL16A1Q07092 1604 aaPredicted RBP14.26□□□□□ -0.13
TNFAIP3-201ENST00000237289 MSH5O43196 834 aa14.26□□□□□ -0.13
TNFAIP3-201ENST00000237289 ERVV-2B6SEH9 535 aa14.25□□□□□ -0.13
TNFAIP3-201ENST00000237289 FMNL2Q96PY5 1086 aa14.25□□□□□ -0.13
TNFAIP3-201ENST00000237289 NFAT5O94916 1531 aa14.25□□□□□ -0.13
TNFAIP3-201ENST00000237289 FTSJ3Q8IY81 847 aaKnown RBP14.25□□□□□ -0.13
TNFAIP3-201ENST00000237289 CAMTA1Q9Y6Y1 1673 aa14.25□□□□□ -0.13
TNFAIP3-201ENST00000237289 IPO8O15397 1037 aaKnown RBP14.25□□□□□ -0.13
TNFAIP3-201ENST00000237289 EXOSC9Q06265 439 aaKnown RBP14.25□□□□□ -0.13
TNFAIP3-201ENST00000237289 CYP27B1O15528 508 aa14.24□□□□□ -0.13
TNFAIP3-201ENST00000237289 SLC39A6Q13433 755 aa14.24□□□□□ -0.13
TNFAIP3-201ENST00000237289 STARD3NLO95772 234 aa14.24□□□□□ -0.13
TNFAIP3-201ENST00000237289 TWISTNBQ3B726 338 aaPredicted RBP14.24□□□□□ -0.13
TNFAIP3-201ENST00000237289 SLC52A2Q9HAB3 445 aa14.24□□□□□ -0.13
TNFAIP3-201ENST00000237289 RCAN3Q9UKA8 241 aa14.23□□□□□ -0.13
TNFAIP3-201ENST00000237289 NRKQ7Z2Y5 1582 aa14.23□□□□□ -0.13
TNFAIP3-201ENST00000237289 MS4A1P11836 297 aa14.23□□□□□ -0.13
TNFAIP3-201ENST00000237289 HDGFL1Q5TGJ6 251 aa14.23□□□□□ -0.13
TNFAIP3-201ENST00000237289 IL16Q14005 1332 aa14.23□□□□□ -0.13
TNFAIP3-201ENST00000237289 CCDC30Q5VVM6 783 aa14.23□□□□□ -0.13
TNFAIP3-201ENST00000237289 KDRP35968 1356 aa14.22□□□□□ -0.13
TNFAIP3-201ENST00000237289 TCERG1O14776 1098 aaKnown RBP14.22□□□□□ -0.13
TNFAIP3-201ENST00000237289 IL17REQ8NFR9 667 aa14.22□□□□□ -0.13
TNFAIP3-201ENST00000237289 TRPM3Q9HCF6 1732 aaPredicted RBP14.22□□□□□ -0.13
TNFAIP3-201ENST00000237289 TEX13AQ9BXU3 409 aaPredicted RBP14.22□□□□□ -0.13
TNFAIP3-201ENST00000237289 OVOS2A0A0G2JMS6 1433 aa14.22□□□□□ -0.13
TNFAIP3-201ENST00000237289 ALS2Q96Q42 1657 aa14.21□□□□□ -0.13
TNFAIP3-201ENST00000237289 SLFN5Q08AF3 891 aa14.21□□□□□ -0.13
TNFAIP3-201ENST00000237289 TRIM35Q9UPQ4 493 aa14.21□□□□□ -0.13
TNFAIP3-201ENST00000237289 TRIM37O94972 964 aa14.21□□□□□ -0.13
TNFAIP3-201ENST00000237289 APBA3O96018 575 aa14.21□□□□□ -0.13
TNFAIP3-201ENST00000237289 MBIPQ9NS73 344 aa14.21□□□□□ -0.13
TNFAIP3-201ENST00000237289 BCL2L13Q9BXK5 485 aa14.21□□□□□ -0.14
TNFAIP3-201ENST00000237289 ANKRD26Q9UPS8 1709 aa14.2□□□□□ -0.14
TNFAIP3-201ENST00000237289 DUSP27Q5VZP5 1158 aa14.2□□□□□ -0.14
TNFAIP3-201ENST00000237289 ATP6V1AP38606 617 aa14.2□□□□□ -0.14
TNFAIP3-201ENST00000237289 NCBP3Q53F19 620 aaKnown RBP14.2□□□□□ -0.14
TNFAIP3-201ENST00000237289 COL14A1Q05707 1796 aaKnown RBP14.2□□□□□ -0.14
TNFAIP3-201ENST00000237289 SNRPA1P09661 255 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms