RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 SPATA31D1Q6ZQQ2 1576 aa11.37□□□□□ -0.59
SYDE2-201ENST00000234668 TNPO1Q92973 898 aaKnown RBP11.37□□□□□ -0.59
SYDE2-201ENST00000234668 EID1Q9Y6B2 187 aa11.37□□□□□ -0.59
SYDE2-201ENST00000234668 MSH6P52701 1360 aa11.37□□□□□ -0.59
SYDE2-201ENST00000234668 GAS2L2Q8NHY3 880 aa11.36□□□□□ -0.59
SYDE2-201ENST00000234668 NRXN3Q9Y4C0 1643 aa11.36□□□□□ -0.59
SYDE2-201ENST00000234668 DLC1Q96QB1 1528 aa11.36□□□□□ -0.59
SYDE2-201ENST00000234668 ADAMTS13Q76LX8 1427 aa11.36□□□□□ -0.59
SYDE2-201ENST00000234668 PLEKHG3A1L390 1219 aa11.35□□□□□ -0.59
SYDE2-201ENST00000234668 INTS3Q68E01 1043 aaKnown RBP11.35□□□□□ -0.59
SYDE2-201ENST00000234668 PTPRUQ92729 1446 aa11.35□□□□□ -0.59
SYDE2-201ENST00000234668 CDC45O75419 566 aa11.35□□□□□ -0.59
SYDE2-201ENST00000234668 XRCC6P12956 609 aaKnown RBP eCLIP11.35□□□□□ -0.592e-6■■■■■ 34.5
SYDE2-201ENST00000234668 SDSP20132 328 aa11.35□□□□□ -0.59
SYDE2-201ENST00000234668 ANKRD44Q8N8A2 993 aa11.35□□□□□ -0.59
SYDE2-201ENST00000234668 CHMP4BQ9H444 224 aaKnown RBP11.35□□□□□ -0.59
SYDE2-201ENST00000234668 CHAMP1Q96JM3 812 aa11.35□□□□□ -0.59
SYDE2-201ENST00000234668 SSFA2P28290 1259 aa11.34□□□□□ -0.59
SYDE2-201ENST00000234668 PIK3R4Q99570 1358 aa11.34□□□□□ -0.59
SYDE2-201ENST00000234668 KCNA6P17658 529 aa11.34□□□□□ -0.59
SYDE2-201ENST00000234668 FKBP5Q13451 457 aaPredicted RBP11.34□□□□□ -0.59
SYDE2-201ENST00000234668 TTC22Q5TAA0 569 aa11.34□□□□□ -0.59
SYDE2-201ENST00000234668 FOXD4L5Q5VV16 416 aaPredicted RBP11.34□□□□□ -0.59
SYDE2-201ENST00000234668 ABTB2Q8N961 1025 aa11.34□□□□□ -0.59
SYDE2-201ENST00000234668 FOXD4L4Q8WXT5 416 aaPredicted RBP11.34□□□□□ -0.59
SYDE2-201ENST00000234668 DLG5Q8TDM6 1919 aa11.34□□□□□ -0.59
SYDE2-201ENST00000234668 AGLP35573 1532 aa11.34□□□□□ -0.59
SYDE2-201ENST00000234668 SIRT1Q96EB6 747 aa11.33□□□□□ -0.6
SYDE2-201ENST00000234668 USP6P35125 1406 aa11.33□□□□□ -0.6
SYDE2-201ENST00000234668 CDC42BPGQ6DT37 1551 aa11.33□□□□□ -0.6
SYDE2-201ENST00000234668 SETD1AO15047 1707 aaKnown RBP11.33□□□□□ -0.6
SYDE2-201ENST00000234668 GOLGA6L3A6NEY3 463 aa11.33□□□□□ -0.6
SYDE2-201ENST00000234668 EIF2S2P20042 333 aaKnown RBP11.33□□□□□ -0.6
SYDE2-201ENST00000234668 NOL8Q76FK4 1167 aaKnown RBP11.33□□□□□ -0.6
SYDE2-201ENST00000234668 RTL1A6NKG5 1358 aa11.33□□□□□ -0.6
SYDE2-201ENST00000234668 XPCQ01831 940 aaPredicted RBP11.33□□□□□ -0.6
SYDE2-201ENST00000234668 K7ELQ4 463 aaPredicted RBP11.32□□□□□ -0.6
SYDE2-201ENST00000234668 ANXA1P04083 346 aa11.32□□□□□ -0.6
SYDE2-201ENST00000234668 PKP1Q13835 747 aa11.32□□□□□ -0.6
SYDE2-201ENST00000234668 PNMA6EA0A0J9YXQ4 647 aa11.32□□□□□ -0.6
SYDE2-201ENST00000234668 IL17REQ8NFR9 667 aa11.32□□□□□ -0.6
SYDE2-201ENST00000234668 SNX21Q969T3 373 aa11.32□□□□□ -0.6
SYDE2-201ENST00000234668 RGS12O14924 1447 aa11.31□□□□□ -0.6
SYDE2-201ENST00000234668 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.31□□□□□ -0.6
SYDE2-201ENST00000234668 LMOD2Q6P5Q4 547 aa11.31□□□□□ -0.6
SYDE2-201ENST00000234668 RPAP2Q8IXW5 612 aaPredicted RBP11.31□□□□□ -0.6
SYDE2-201ENST00000234668 PHAXQ9H814 394 aaKnown RBP11.31□□□□□ -0.6
SYDE2-201ENST00000234668 MAP4K4O95819 1239 aaPredicted RBP11.3□□□□□ -0.6
SYDE2-201ENST00000234668 DDIT3P35638 169 aa11.3□□□□□ -0.6
SYDE2-201ENST00000234668 STK31Q9BXU1 1019 aa11.3□□□□□ -0.6
SYDE2-201ENST00000234668 USP26Q9BXU7 913 aa11.3□□□□□ -0.6
SYDE2-201ENST00000234668 IL1RAPL2Q9NP60 686 aa11.3□□□□□ -0.6
SYDE2-201ENST00000234668 OVOS2A0A0J9YW53 1432 aa11.3□□□□□ -0.6
SYDE2-201ENST00000234668 CRB1P82279 1406 aa11.3□□□□□ -0.6
SYDE2-201ENST00000234668 OVOS2Q6IE36 1432 aa11.3□□□□□ -0.6
SYDE2-201ENST00000234668 EIF5BO60841 1220 aaKnown RBP11.3□□□□□ -0.6
SYDE2-201ENST00000234668 RILPL2Q969X0 211 aa11.3□□□□□ -0.6
SYDE2-201ENST00000234668 RRAGDQ9NQL2 400 aaPredicted RBP11.3□□□□□ -0.6
SYDE2-201ENST00000234668 ATP10DQ9P241 1426 aa11.3□□□□□ -0.6
SYDE2-201ENST00000234668 FLIIQ13045 1269 aa11.3□□□□□ -0.6
SYDE2-201ENST00000234668 GAS2L3Q86XJ1 694 aa11.3□□□□□ -0.6
SYDE2-201ENST00000234668 ZGPATQ8N5A5 531 aaKnown RBP11.3□□□□□ -0.6
SYDE2-201ENST00000234668 DTNBO60941 627 aa11.29□□□□□ -0.6
SYDE2-201ENST00000234668 NCLP19338 710 aaKnown RBP11.29□□□□□ -0.6
SYDE2-201ENST00000234668 TECPR2O15040 1411 aa11.29□□□□□ -0.6
SYDE2-201ENST00000234668 KCNQ3O43525 872 aa11.29□□□□□ -0.6
SYDE2-201ENST00000234668 HOXC9P31274 260 aa11.29□□□□□ -0.6
SYDE2-201ENST00000234668 LGR6Q9HBX8 967 aa11.29□□□□□ -0.6
SYDE2-201ENST00000234668 KNDC1Q76NI1 1749 aa11.29□□□□□ -0.6
SYDE2-201ENST00000234668 SETD1BQ9UPS6 1966 aaKnown RBP11.28□□□□□ -0.6
SYDE2-201ENST00000234668 RIMS1Q86UR5 1692 aaKnown RBP11.28□□□□□ -0.6
SYDE2-201ENST00000234668 GNAT3A8MTJ3 354 aa11.28□□□□□ -0.6
SYDE2-201ENST00000234668 TRIM6-TRIM34B2RNG4 842 aa11.28□□□□□ -0.6
SYDE2-201ENST00000234668 FOXD4L6Q3SYB3 417 aaPredicted RBP11.28□□□□□ -0.6
SYDE2-201ENST00000234668 FOXD4L3Q6VB84 417 aaPredicted RBP11.28□□□□□ -0.6
SYDE2-201ENST00000234668 LRRFIP2Q9Y608 721 aaKnown RBP11.28□□□□□ -0.6
SYDE2-201ENST00000234668 PDE1AP54750 535 aa11.28□□□□□ -0.6
SYDE2-201ENST00000234668 RAB3GAP1Q15042 981 aa11.28□□□□□ -0.6
SYDE2-201ENST00000234668 TPRNQ4KMQ1 711 aa11.28□□□□□ -0.6
SYDE2-201ENST00000234668 LRRC59Q96AG4 307 aaKnown RBP11.28□□□□□ -0.6
SYDE2-201ENST00000234668 PTPRCP08575 1304 aa11.28□□□□□ -0.6
SYDE2-201ENST00000234668 GNAI2P04899 355 aa11.27□□□□□ -0.6
SYDE2-201ENST00000234668 TRHP20396 242 aaPredicted RBP11.27□□□□□ -0.6
SYDE2-201ENST00000234668 L1TD1Q5T7N2 865 aaKnown RBP11.27□□□□□ -0.6
SYDE2-201ENST00000234668 PLEKHG1Q9ULL1 1385 aa11.27□□□□□ -0.61
SYDE2-201ENST00000234668 PEAK1Q9H792 1746 aa11.27□□□□□ -0.61
SYDE2-201ENST00000234668 NUTM1Q86Y26 1132 aa11.27□□□□□ -0.61
SYDE2-201ENST00000234668 CEP170BQ9Y4F5 1589 aaPredicted RBP11.27□□□□□ -0.61
SYDE2-201ENST00000234668 FLT4P35916 1363 aa11.27□□□□□ -0.61
SYDE2-201ENST00000234668 MCTP1Q6DN14 999 aa11.27□□□□□ -0.61
SYDE2-201ENST00000234668 UNC5CLQ8IV45 518 aa11.27□□□□□ -0.61
SYDE2-201ENST00000234668 TBX22Q9Y458 520 aa11.27□□□□□ -0.61
SYDE2-201ENST00000234668 DDX11L8A8MPP1 907 aa11.26□□□□□ -0.61
SYDE2-201ENST00000234668 HAP1P54257 671 aaPredicted RBP11.26□□□□□ -0.61
SYDE2-201ENST00000234668 AK9Q5TCS8 1911 aa11.26□□□□□ -0.61
SYDE2-201ENST00000234668 C3P01024 1663 aa11.26□□□□□ -0.61
SYDE2-201ENST00000234668 USP31Q70CQ4 1352 aa11.26□□□□□ -0.61
SYDE2-201ENST00000234668 KIAA0232Q92628 1395 aa11.26□□□□□ -0.61
SYDE2-201ENST00000234668 FSD2A1L4K1 749 aa11.26□□□□□ -0.61
SYDE2-201ENST00000234668 THEMISQ8N1K5 641 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms