RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 EXOSC9Q06265 439 aaKnown RBP24.15■■□□□ 1.46
SNX17-201ENST00000233575 MAP3K5Q99683 1374 aa24.15■■□□□ 1.46
SNX17-201ENST00000233575 GNAT3A8MTJ3 354 aa24.15■■□□□ 1.46
SNX17-201ENST00000233575 RTF1Q92541 710 aaKnown RBP24.15■■□□□ 1.46
SNX17-201ENST00000233575 IFT57Q9NWB7 429 aa24.15■■□□□ 1.46
SNX17-201ENST00000233575 MBIPQ9NS73 344 aa24.14■■□□□ 1.45
SNX17-201ENST00000233575 CRB1P82279 1406 aa24.13■■□□□ 1.45
SNX17-201ENST00000233575 TOM1L2Q6ZVM7 507 aa24.13■■□□□ 1.45
SNX17-201ENST00000233575 CFAP44Q96MT7 982 aa24.13■■□□□ 1.45
SNX17-201ENST00000233575 BTG4Q9NY30 223 aa24.13■■□□□ 1.45
SNX17-201ENST00000233575 COL14A1Q05707 1796 aaKnown RBP24.13■■□□□ 1.45
SNX17-201ENST00000233575 PLIN1O60240 522 aa24.13■■□□□ 1.45
SNX17-201ENST00000233575 ADAMTS2O95450 1211 aa24.13■■□□□ 1.45
SNX17-201ENST00000233575 GNAI1P63096 354 aa24.13■■□□□ 1.45
SNX17-201ENST00000233575 PLEKHO1Q53GL0 409 aaPredicted RBP24.13■■□□□ 1.45
SNX17-201ENST00000233575 LARP1Q6PKG0 1096 aaKnown RBP24.13■■□□□ 1.45
SNX17-201ENST00000233575 ZNF530Q6P9A1 599 aaPredicted RBP24.12■■□□□ 1.45
SNX17-201ENST00000233575 IL17REQ8NFR9 667 aa24.12■■□□□ 1.45
SNX17-201ENST00000233575 RAPGEF4Q8WZA2 1011 aa24.12■■□□□ 1.45
SNX17-201ENST00000233575 NUTM2BA6NNL0 878 aaPredicted RBP24.11■■□□□ 1.45
SNX17-201ENST00000233575 NUTM2EB1AL46 878 aaPredicted RBP24.11■■□□□ 1.45
SNX17-201ENST00000233575 BCAR3O75815 825 aa24.11■■□□□ 1.45
SNX17-201ENST00000233575 NUTM2AQ8IVF1 878 aaPredicted RBP24.11■■□□□ 1.45
SNX17-201ENST00000233575 PELP1Q8IZL8 1130 aaKnown RBP24.11■■□□□ 1.45
SNX17-201ENST00000233575 LRRC37A3O60309 1634 aa24.11■■□□□ 1.45
SNX17-201ENST00000233575 AMOTQ4VCS5 1084 aa24.11■■□□□ 1.45
SNX17-201ENST00000233575 EVA1CP58658 441 aa24.1■■□□□ 1.45
SNX17-201ENST00000233575 HTATSF1O43719 755 aaKnown RBP24.1■■□□□ 1.45
SNX17-201ENST00000233575 TATP17735 454 aaPredicted RBP24.08■■□□□ 1.45
SNX17-201ENST00000233575 MIS18AQ9NYP9 233 aa24.08■■□□□ 1.45
SNX17-201ENST00000233575 CHL1O00533 1208 aa24.07■■□□□ 1.44
SNX17-201ENST00000233575 RARSP54136 660 aaKnown RBP24.07■■□□□ 1.44
SNX17-201ENST00000233575 AKAP4Q5JQC9 854 aa24.07■■□□□ 1.44
SNX17-201ENST00000233575 LGR6Q9HBX8 967 aa24.07■■□□□ 1.44
SNX17-201ENST00000233575 PLCH1Q4KWH8 1693 aa24.07■■□□□ 1.44
SNX17-201ENST00000233575 CARD10Q9BWT7 1032 aa24.06■■□□□ 1.44
SNX17-201ENST00000233575 BCL2L13Q9BXK5 485 aa24.06■■□□□ 1.44
SNX17-201ENST00000233575 VIRMAQ69YN4 1812 aaKnown RBP24.05■■□□□ 1.44
SNX17-201ENST00000233575 MPRIPQ6WCQ1 1025 aa24.05■■□□□ 1.44
SNX17-201ENST00000233575 TSPYL6Q8N831 410 aa24.05■■□□□ 1.44
SNX17-201ENST00000233575 USP35Q9P2H5 1018 aa24.05■■□□□ 1.44
SNX17-201ENST00000233575 CEMIPQ8WUJ3 1361 aa24.04■■□□□ 1.44
SNX17-201ENST00000233575 JCADQ9P266 1359 aa24.04■■□□□ 1.44
SNX17-201ENST00000233575 PKD1L3Q7Z443 1732 aa24.04■■□□□ 1.44
SNX17-201ENST00000233575 C1orf141Q5JVX7 400 aa24.04■■□□□ 1.44
SNX17-201ENST00000233575 ELL2O00472 640 aaPredicted RBP24.03■■□□□ 1.44
SNX17-201ENST00000233575 C8orf58Q8NAV2 365 aa24.03■■□□□ 1.44
SNX17-201ENST00000233575 OVOS2A0A0G2JMS6 1433 aa24.03■■□□□ 1.44
SNX17-201ENST00000233575 KRT24Q2M2I5 525 aa24.03■■□□□ 1.44
SNX17-201ENST00000233575 C20orf194Q5TEA3 1177 aa24.03■■□□□ 1.44
SNX17-201ENST00000233575 PARP4Q9UKK3 1724 aaKnown RBP24.02■■□□□ 1.44
SNX17-201ENST00000233575 CT47B1P0C2W7 299 aaPredicted RBP24.01■■□□□ 1.43
SNX17-201ENST00000233575 HSPA1LP34931 641 aa24.01■■□□□ 1.43
SNX17-201ENST00000233575 SPG7Q9UQ90 795 aa24.01■■□□□ 1.43
SNX17-201ENST00000233575 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.01■■□□□ 1.435e-9■□□□□ 8.6
SNX17-201ENST00000233575 TSPYL4Q9UJ04 414 aa24.01■■□□□ 1.43
SNX17-201ENST00000233575 NRAPQ86VF7 1730 aa24■■□□□ 1.43
SNX17-201ENST00000233575 CYP27B1O15528 508 aa24■■□□□ 1.43
SNX17-201ENST00000233575 RNMTO43148 476 aaKnown RBP24■■□□□ 1.43
SNX17-201ENST00000233575 VAMP4O75379 141 aa24■■□□□ 1.43
SNX17-201ENST00000233575 PHKG2P15735 406 aa24■■□□□ 1.43
SNX17-201ENST00000233575 IL2RBP14784 551 aa23.99■■□□□ 1.43
SNX17-201ENST00000233575 SSH1Q8WYL5 1049 aa23.99■■□□□ 1.43
SNX17-201ENST00000233575 ADAMTS7Q9UKP4 1686 aa23.98■■□□□ 1.43
SNX17-201ENST00000233575 PLEKHG2Q9H7P9 1386 aa23.98■■□□□ 1.43
SNX17-201ENST00000233575 KDM6AO15550 1401 aaPredicted RBP23.98■■□□□ 1.43
SNX17-201ENST00000233575 TAF7Q15545 349 aaPredicted RBP23.98■■□□□ 1.43
SNX17-201ENST00000233575 TWISTNBQ3B726 338 aaPredicted RBP23.98■■□□□ 1.43
SNX17-201ENST00000233575 SHANK3Q9BYB0 1731 aa23.96■■□□□ 1.43
SNX17-201ENST00000233575 IFNL2Q8IZJ0 200 aa23.96■■□□□ 1.43
SNX17-201ENST00000233575 FRAT1Q92837 279 aaPredicted RBP23.96■■□□□ 1.43
SNX17-201ENST00000233575 SMC4Q9NTJ3 1288 aa23.96■■□□□ 1.43
SNX17-201ENST00000233575 LRP6O75581 1613 aa23.95■■□□□ 1.43
SNX17-201ENST00000233575 SCN11AQ9UI33 1791 aa23.95■■□□□ 1.42
SNX17-201ENST00000233575 SLIT2O94813 1529 aa23.95■■□□□ 1.42
SNX17-201ENST00000233575 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.94■■□□□ 1.42
SNX17-201ENST00000233575 EXOC6Q8TAG9 804 aa23.94■■□□□ 1.42
SNX17-201ENST00000233575 ZCRB1Q8TBF4 217 aaKnown RBP23.94■■□□□ 1.42
SNX17-201ENST00000233575 TCERG1O14776 1098 aaKnown RBP23.94■■□□□ 1.42
SNX17-201ENST00000233575 TEFQ10587 303 aa23.94■■□□□ 1.42
SNX17-201ENST00000233575 NWD2Q9ULI1 1742 aa23.93■■□□□ 1.42
SNX17-201ENST00000233575 C8orf37Q96NL8 207 aa23.93■■□□□ 1.42
SNX17-201ENST00000233575 TNNQ9UQP3 1299 aa23.93■■□□□ 1.42
SNX17-201ENST00000233575 SIPA1L3O60292 1781 aaPredicted RBP23.93■■□□□ 1.42
SNX17-201ENST00000233575 ERICH6BQ5W0A0 696 aa23.93■■□□□ 1.42
SNX17-201ENST00000233575 CRBNQ96SW2 442 aa23.93■■□□□ 1.42
SNX17-201ENST00000233575 KDM3BQ7LBC6 1761 aa23.92■■□□□ 1.42
SNX17-201ENST00000233575 DISP2A7MBM2 1401 aa23.91■■□□□ 1.42
SNX17-201ENST00000233575 CANXP27824 592 aaKnown RBP23.91■■□□□ 1.42
SNX17-201ENST00000233575 SPATA31A6Q5VVP1 1343 aa23.91■■□□□ 1.42
SNX17-201ENST00000233575 PCDH11XQ9BZA7 1347 aa23.91■■□□□ 1.42
SNX17-201ENST00000233575 PCDH11YQ9BZA8 1340 aa23.91■■□□□ 1.42
SNX17-201ENST00000233575 KCNQ3O43525 872 aa23.91■■□□□ 1.42
SNX17-201ENST00000233575 ALDH1L2Q3SY69 923 aa23.91■■□□□ 1.42
SNX17-201ENST00000233575 BABAM1Q9NWV8 329 aa23.9■■□□□ 1.42
SNX17-201ENST00000233575 DDX54Q8TDD1 881 aaKnown RBP23.89■■□□□ 1.42
SNX17-201ENST00000233575 WNK3Q9BYP7 1800 aa23.89■■□□□ 1.42
SNX17-201ENST00000233575 SPATA31A1Q5TZJ5 1347 aa23.89■■□□□ 1.41
SNX17-201ENST00000233575 BTBD11A6QL63 1104 aa23.89■■□□□ 1.41
SNX17-201ENST00000233575 ZNF428Q96B54 188 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms