RNA–Protein interactions for RNA: ENST00000229854.11

MCM3-201, Transcript of minichromosome maintenance complex component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCM3, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-201ENST00000229854 KIF20AO95235 890 aa12.63□□□□□ -0.39
MCM3-201ENST00000229854 HMGN5P82970 282 aaKnown RBP12.63□□□□□ -0.39
MCM3-201ENST00000229854 PLEKHF1Q96S99 279 aa12.63□□□□□ -0.39
MCM3-201ENST00000229854 AKAP12Q02952 1782 aa12.63□□□□□ -0.39
MCM3-201ENST00000229854 LETM1O95202 739 aaPredicted RBP12.62□□□□□ -0.39
MCM3-201ENST00000229854 KIF3AQ9Y496 699 aa12.62□□□□□ -0.39
MCM3-201ENST00000229854 ATP7BP35670 1465 aa12.62□□□□□ -0.39
MCM3-201ENST00000229854 KIF13AQ9H1H9 1805 aa12.62□□□□□ -0.39
MCM3-201ENST00000229854 U2SURPO15042 1029 aaKnown RBP12.62□□□□□ -0.39
MCM3-201ENST00000229854 TPRNQ4KMQ1 711 aa12.62□□□□□ -0.39
MCM3-201ENST00000229854 PRIMPOLQ96LW4 560 aa12.62□□□□□ -0.39
MCM3-201ENST00000229854 TSPY26PQ9H489 355 aa12.62□□□□□ -0.39
MCM3-201ENST00000229854 NOLC1Q14978 699 aaKnown RBP eCLIP12.61□□□□□ -0.391e-7■■□□□ 13.7
MCM3-201ENST00000229854 CYP2E1P05181 493 aaPredicted RBP12.61□□□□□ -0.39
MCM3-201ENST00000229854 CT47B1P0C2W7 299 aaPredicted RBP12.61□□□□□ -0.39
MCM3-201ENST00000229854 CABP2Q9NPB3 220 aa12.61□□□□□ -0.39
MCM3-201ENST00000229854 GTF2E1P29083 439 aaPredicted RBP12.6□□□□□ -0.39
MCM3-201ENST00000229854 FOXD4L6Q3SYB3 417 aaPredicted RBP12.6□□□□□ -0.39
MCM3-201ENST00000229854 FOXD4L3Q6VB84 417 aaPredicted RBP12.6□□□□□ -0.39
MCM3-201ENST00000229854 CWC22Q9HCG8 908 aaKnown RBP12.6□□□□□ -0.39
MCM3-201ENST00000229854 MAP2P11137 1827 aaKnown RBP12.6□□□□□ -0.39
MCM3-201ENST00000229854 PDCL2Q8N4E4 241 aa12.6□□□□□ -0.39
MCM3-201ENST00000229854 TTC12Q9H892 705 aaPredicted RBP12.6□□□□□ -0.39
MCM3-201ENST00000229854 PPP6R1Q9UPN7 881 aa12.6□□□□□ -0.39
MCM3-201ENST00000229854 LRRC7Q96NW7 1537 aa12.6□□□□□ -0.39
MCM3-201ENST00000229854 NUTM2DQ5VT03 806 aaPredicted RBP12.6□□□□□ -0.39
MCM3-201ENST00000229854 ST18O60284 1047 aa12.59□□□□□ -0.39
MCM3-201ENST00000229854 GCC1Q96CN9 775 aa12.59□□□□□ -0.39
MCM3-201ENST00000229854 C3P01024 1663 aa12.59□□□□□ -0.39
MCM3-201ENST00000229854 PLCB2Q00722 1185 aa12.59□□□□□ -0.39
MCM3-201ENST00000229854 ZDHHC9Q9Y397 364 aa12.59□□□□□ -0.39
MCM3-201ENST00000229854 MBD3O95983 291 aa12.58□□□□□ -0.39
MCM3-201ENST00000229854 ZNF771Q7L3S4 317 aaPredicted RBP12.58□□□□□ -0.39
MCM3-201ENST00000229854 BCL2L12Q9HB09 334 aa12.58□□□□□ -0.39
MCM3-201ENST00000229854 CPS1P31327 1500 aa12.58□□□□□ -0.39
MCM3-201ENST00000229854 PIBF1Q8WXW3 757 aa12.58□□□□□ -0.4
MCM3-201ENST00000229854 USP25Q9UHP3 1055 aa12.58□□□□□ -0.4
MCM3-201ENST00000229854 NRKQ7Z2Y5 1582 aa12.57□□□□□ -0.4
MCM3-201ENST00000229854 U2AF2P26368 475 aaKnown RBP eCLIP12.57□□□□□ -0.45e-7■■■■□ 20.3
MCM3-201ENST00000229854 CGNQ9P2M7 1197 aaKnown RBP12.57□□□□□ -0.4
MCM3-201ENST00000229854 TOPAZ1Q8N9V7 1692 aa12.57□□□□□ -0.4
MCM3-201ENST00000229854 FYB1O15117 783 aa12.57□□□□□ -0.4
MCM3-201ENST00000229854 ITSN1Q15811 1721 aa12.57□□□□□ -0.4
MCM3-201ENST00000229854 TMPOP42166 694 aaKnown RBP12.56□□□□□ -0.4
MCM3-201ENST00000229854 SYAP1Q96A49 352 aaPredicted RBP12.56□□□□□ -0.4
MCM3-201ENST00000229854 PRAM1Q96QH2 718 aa12.56□□□□□ -0.4
MCM3-201ENST00000229854 BCL11BQ9C0K0 894 aaPredicted RBP12.56□□□□□ -0.4
MCM3-201ENST00000229854 DLG5Q8TDM6 1919 aa12.56□□□□□ -0.4
MCM3-201ENST00000229854 CPSF1Q10570 1443 aaKnown RBP12.56□□□□□ -0.4
MCM3-201ENST00000229854 IL16Q14005 1332 aa12.56□□□□□ -0.4
MCM3-201ENST00000229854 UBR1Q8IWV7 1749 aa12.56□□□□□ -0.4
MCM3-201ENST00000229854 GSPT1P15170 499 aaKnown RBP12.56□□□□□ -0.4
MCM3-201ENST00000229854 USP26Q9BXU7 913 aa12.56□□□□□ -0.4
MCM3-201ENST00000229854 TECPR2O15040 1411 aa12.55□□□□□ -0.4
MCM3-201ENST00000229854 FAM135BQ49AJ0 1406 aa12.55□□□□□ -0.4
MCM3-201ENST00000229854 PPIP5K1Q6PFW1 1433 aa12.55□□□□□ -0.4
MCM3-201ENST00000229854 CHAF1AQ13111 956 aaPredicted RBP12.55□□□□□ -0.4
MCM3-201ENST00000229854 FBXO31Q5XUX0 539 aaPredicted RBP12.55□□□□□ -0.4
MCM3-201ENST00000229854 CHMP4BQ9H444 224 aaKnown RBP12.55□□□□□ -0.4
MCM3-201ENST00000229854 NAP1L2Q9ULW6 460 aaPredicted RBP12.55□□□□□ -0.4
MCM3-201ENST00000229854 TRIM35Q9UPQ4 493 aa12.55□□□□□ -0.4
MCM3-201ENST00000229854 VGLL3A8MV65 326 aa12.55□□□□□ -0.4
MCM3-201ENST00000229854 GTF2F1P35269 517 aaKnown RBP eCLIP12.55□□□□□ -0.4
MCM3-201ENST00000229854 NOL8Q76FK4 1167 aaKnown RBP12.55□□□□□ -0.4
MCM3-201ENST00000229854 RIMS2Q9UQ26 1411 aa12.54□□□□□ -0.4
MCM3-201ENST00000229854 GDPD2Q9HCC8 539 aa12.54□□□□□ -0.4
MCM3-201ENST00000229854 APBB1O00213 710 aa12.54□□□□□ -0.4
MCM3-201ENST00000229854 ADCY5O95622 1261 aa12.54□□□□□ -0.4
MCM3-201ENST00000229854 NALCNQ8IZF0 1738 aa12.53□□□□□ -0.4
MCM3-201ENST00000229854 ZBTB7BO15156 539 aaPredicted RBP12.53□□□□□ -0.4
MCM3-201ENST00000229854 INTS3Q68E01 1043 aaKnown RBP12.53□□□□□ -0.4
MCM3-201ENST00000229854 TERF2IPQ9NYB0 399 aa12.53□□□□□ -0.4
MCM3-201ENST00000229854 C16orf71Q8IYS4 520 aaPredicted RBP12.53□□□□□ -0.4
MCM3-201ENST00000229854 ZBTB22O15209 634 aa12.53□□□□□ -0.4
MCM3-201ENST00000229854 CDK11BP21127 795 aaKnown RBP12.53□□□□□ -0.4
MCM3-201ENST00000229854 CASC1Q6TDU7 716 aa12.53□□□□□ -0.4
MCM3-201ENST00000229854 TMEM51Q9NW97 253 aa12.53□□□□□ -0.4
MCM3-201ENST00000229854 CDK12Q9NYV4 1490 aaPredicted RBP12.52□□□□□ -0.4
MCM3-201ENST00000229854 RIOK3O14730 519 aaKnown RBP12.52□□□□□ -0.4
MCM3-201ENST00000229854 PHF14O94880 888 aa12.52□□□□□ -0.4
MCM3-201ENST00000229854 PLEKHM2Q8IWE5 1019 aa12.52□□□□□ -0.4
MCM3-201ENST00000229854 DIAPH3Q9NSV4 1193 aa12.52□□□□□ -0.4
MCM3-201ENST00000229854 ELL2O00472 640 aaPredicted RBP12.52□□□□□ -0.41
MCM3-201ENST00000229854 SRPK2P78362 688 aaKnown RBP12.52□□□□□ -0.41
MCM3-201ENST00000229854 FKBP5Q13451 457 aaPredicted RBP12.52□□□□□ -0.41
MCM3-201ENST00000229854 SIRT2Q8IXJ6 389 aa12.52□□□□□ -0.41
MCM3-201ENST00000229854 GGNBP2Q9H3C7 697 aa12.51□□□□□ -0.41
MCM3-201ENST00000229854 MINK1Q8N4C8 1332 aaPredicted RBP12.51□□□□□ -0.41
MCM3-201ENST00000229854 NEK4P51957 841 aa12.51□□□□□ -0.41
MCM3-201ENST00000229854 CDK19Q9BWU1 502 aa12.51□□□□□ -0.41
MCM3-201ENST00000229854 STK26Q9P289 416 aa12.51□□□□□ -0.41
MCM3-201ENST00000229854 GADD45BO75293 160 aaPredicted RBP12.51□□□□□ -0.41
MCM3-201ENST00000229854 TTC22Q5TAA0 569 aa12.51□□□□□ -0.41
MCM3-201ENST00000229854 CFAP44Q96MT7 982 aa12.51□□□□□ -0.41
MCM3-201ENST00000229854 EDC4Q6P2E9 1401 aaKnown RBP12.5□□□□□ -0.41
MCM3-201ENST00000229854 SAFB2Q14151 953 aaKnown RBP eCLIP12.5□□□□□ -0.41
MCM3-201ENST00000229854 TAF3Q5VWG9 929 aa12.5□□□□□ -0.41
MCM3-201ENST00000229854 RGPD1P0DJD0 1748 aa12.5□□□□□ -0.41
MCM3-201ENST00000229854 HCLS1P14317 486 aaPredicted RBP12.5□□□□□ -0.41
MCM3-201ENST00000229854 MAPK8IP2Q13387 824 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms