RNA–Protein interactions for RNA: ENST00000229729.10

SLC44A4-202, Transcript of solute carrier family 44 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC44A4, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4-202ENST00000229729 SPDYE4A6NLX3 237 aa15.39■□□□□ 0.05
SLC44A4-202ENST00000229729 C17orf53Q8N3J3 647 aaPredicted RBP15.39■□□□□ 0.05
SLC44A4-202ENST00000229729 INTS4Q96HW7 963 aaKnown RBP15.39■□□□□ 0.05
SLC44A4-202ENST00000229729 C14orf93Q9H972 538 aaKnown RBP15.39■□□□□ 0.05
SLC44A4-202ENST00000229729 FAM177BA6PVY3 158 aa15.38■□□□□ 0.05
SLC44A4-202ENST00000229729 TPM3P06753 285 aa15.38■□□□□ 0.05
SLC44A4-202ENST00000229729 GTF2E1P29083 439 aaPredicted RBP15.38■□□□□ 0.05
SLC44A4-202ENST00000229729 MPNDQ8N594 471 aa15.38■□□□□ 0.05
SLC44A4-202ENST00000229729 KNDC1Q76NI1 1749 aa15.38■□□□□ 0.05
SLC44A4-202ENST00000229729 TULP4Q9NRJ4 1543 aa15.38■□□□□ 0.05
SLC44A4-202ENST00000229729 CTIFO43310 598 aaKnown RBP15.37■□□□□ 0.05
SLC44A4-202ENST00000229729 DIAPH1O60610 1272 aaKnown RBP15.37■□□□□ 0.05
SLC44A4-202ENST00000229729 NEK4P51957 841 aa15.37■□□□□ 0.05
SLC44A4-202ENST00000229729 CCDC183Q5T5S1 534 aa15.37■□□□□ 0.05
SLC44A4-202ENST00000229729 RIOK3O14730 519 aaKnown RBP15.37■□□□□ 0.05
SLC44A4-202ENST00000229729 KIF3BO15066 747 aa15.37■□□□□ 0.05
SLC44A4-202ENST00000229729 U2AF2P26368 475 aaKnown RBP eCLIP15.36■□□□□ 0.05
SLC44A4-202ENST00000229729 C16orf71Q8IYS4 520 aaPredicted RBP15.36■□□□□ 0.05
SLC44A4-202ENST00000229729 KLHL34Q8N239 644 aa15.36■□□□□ 0.05
SLC44A4-202ENST00000229729 KIAA1524Q8TCG1 905 aa15.36■□□□□ 0.05
SLC44A4-202ENST00000229729 KIDINS220Q9ULH0 1771 aa15.36■□□□□ 0.05
SLC44A4-202ENST00000229729 CDC42BPGQ6DT37 1551 aa15.36■□□□□ 0.05
SLC44A4-202ENST00000229729 FCHSD2O94868 740 aa15.36■□□□□ 0.05
SLC44A4-202ENST00000229729 ANKRD26Q9UPS8 1709 aa15.36■□□□□ 0.05
SLC44A4-202ENST00000229729 PDE4CQ08493 712 aa15.35■□□□□ 0.05
SLC44A4-202ENST00000229729 OGFRQ9NZT2 677 aa15.35■□□□□ 0.05
SLC44A4-202ENST00000229729 LRRC7Q96NW7 1537 aa15.35■□□□□ 0.05
SLC44A4-202ENST00000229729 KDM4AO75164 1064 aa15.35■□□□□ 0.05
SLC44A4-202ENST00000229729 GADD45BO75293 160 aaPredicted RBP15.35■□□□□ 0.05
SLC44A4-202ENST00000229729 ANKRD44Q8N8A2 993 aa15.35■□□□□ 0.05
SLC44A4-202ENST00000229729 TMEM87AQ8NBN3 555 aa15.35■□□□□ 0.05
SLC44A4-202ENST00000229729 GABPB1Q06547 395 aaPredicted RBP15.34■□□□□ 0.05
SLC44A4-202ENST00000229729 USP48Q86UV5 1035 aa15.34■□□□□ 0.05
SLC44A4-202ENST00000229729 OTUD7AQ8TE49 926 aaPredicted RBP15.34■□□□□ 0.05
SLC44A4-202ENST00000229729 PPLO60437 1756 aa15.34■□□□□ 0.05
SLC44A4-202ENST00000229729 A0A1W2PP64 1363 aa15.34■□□□□ 0.05
SLC44A4-202ENST00000229729 PNPLA6Q8IY17 1366 aa15.34■□□□□ 0.05
SLC44A4-202ENST00000229729 GNAI1P63096 354 aa15.34■□□□□ 0.05
SLC44A4-202ENST00000229729 ZNF771Q7L3S4 317 aaPredicted RBP15.34■□□□□ 0.05
SLC44A4-202ENST00000229729 GGNBP2Q9H3C7 697 aa15.34■□□□□ 0.05
SLC44A4-202ENST00000229729 FAM135BQ49AJ0 1406 aa15.34■□□□□ 0.05
SLC44A4-202ENST00000229729 WDR33Q9C0J8 1336 aaKnown RBP15.34■□□□□ 0.05
SLC44A4-202ENST00000229729 HCLS1P14317 486 aaPredicted RBP15.33■□□□□ 0.05
SLC44A4-202ENST00000229729 SYCP1Q15431 976 aa15.33■□□□□ 0.05
SLC44A4-202ENST00000229729 RPAP2Q8IXW5 612 aaPredicted RBP15.33■□□□□ 0.05
SLC44A4-202ENST00000229729 TSPYL6Q8N831 410 aa15.33■□□□□ 0.05
SLC44A4-202ENST00000229729 IFT57Q9NWB7 429 aa15.33■□□□□ 0.05
SLC44A4-202ENST00000229729 ATP10DQ9P241 1426 aa15.33■□□□□ 0.05
SLC44A4-202ENST00000229729 MX1P20591 662 aa15.33■□□□□ 0.04
SLC44A4-202ENST00000229729 MCCP23508 829 aa15.32■□□□□ 0.04
SLC44A4-202ENST00000229729 TMEM51Q9NW97 253 aa15.32■□□□□ 0.04
SLC44A4-202ENST00000229729 GOLGA6L6A8MZA4 724 aa15.32■□□□□ 0.04
SLC44A4-202ENST00000229729 GDPD2Q9HCC8 539 aa15.32■□□□□ 0.04
SLC44A4-202ENST00000229729 RTL1A6NKG5 1358 aa15.32■□□□□ 0.04
SLC44A4-202ENST00000229729 GLI2P10070 1586 aa15.32■□□□□ 0.04
SLC44A4-202ENST00000229729 ANAPC15P60006 121 aa15.31■□□□□ 0.04
SLC44A4-202ENST00000229729 TMEM132EQ6IEE7 984 aa15.31■□□□□ 0.04
SLC44A4-202ENST00000229729 ARHGEF28Q8N1W1 1705 aaKnown RBP15.31■□□□□ 0.04
SLC44A4-202ENST00000229729 ZFYVE9O95405 1425 aa15.31■□□□□ 0.04
SLC44A4-202ENST00000229729 TWISTNBQ3B726 338 aaPredicted RBP15.31■□□□□ 0.04
SLC44A4-202ENST00000229729 PYCARDQ9ULZ3 195 aa15.31■□□□□ 0.04
SLC44A4-202ENST00000229729 PRKAR2BP31323 418 aa15.31■□□□□ 0.04
SLC44A4-202ENST00000229729 NFE2L2Q16236 605 aa15.31■□□□□ 0.04
SLC44A4-202ENST00000229729 KCNF1Q9H3M0 494 aa15.31■□□□□ 0.04
SLC44A4-202ENST00000229729 RGS12O14924 1447 aa15.3■□□□□ 0.04
SLC44A4-202ENST00000229729 ASXL2Q76L83 1435 aa15.3■□□□□ 0.04
SLC44A4-202ENST00000229729 CABP2Q9NPB3 220 aa15.3■□□□□ 0.04
SLC44A4-202ENST00000229729 CGNQ9P2M7 1197 aaKnown RBP15.3■□□□□ 0.04
SLC44A4-202ENST00000229729 ATAD2Q6PL18 1390 aa15.3■□□□□ 0.04
SLC44A4-202ENST00000229729 SMARCA5O60264 1052 aaPredicted RBP15.3■□□□□ 0.04
SLC44A4-202ENST00000229729 ZNF853P0CG23 659 aa15.3■□□□□ 0.04
SLC44A4-202ENST00000229729 NCBP1Q09161 790 aaKnown RBP15.3■□□□□ 0.04
SLC44A4-202ENST00000229729 CEP85Q6P2H3 762 aa15.29■□□□□ 0.04
SLC44A4-202ENST00000229729 OSBPL3Q9H4L5 887 aa15.29■□□□□ 0.04
SLC44A4-202ENST00000229729 ELL2O00472 640 aaPredicted RBP15.29■□□□□ 0.04
SLC44A4-202ENST00000229729 IGSF3O75054 1194 aa15.29■□□□□ 0.04
SLC44A4-202ENST00000229729 UBE2HP62256 183 aa15.29■□□□□ 0.04
SLC44A4-202ENST00000229729 MBIPQ9NS73 344 aa15.29■□□□□ 0.04
SLC44A4-202ENST00000229729 RPAP1Q9BWH6 1393 aaPredicted RBP15.28■□□□□ 0.04
SLC44A4-202ENST00000229729 FYB1O15117 783 aa15.28■□□□□ 0.04
SLC44A4-202ENST00000229729 CHGAP10645 457 aaKnown RBP15.28■□□□□ 0.04
SLC44A4-202ENST00000229729 CTNNA3Q9UI47 895 aa15.28■□□□□ 0.04
SLC44A4-202ENST00000229729 HECW2Q9P2P5 1572 aa15.28■□□□□ 0.04
SLC44A4-202ENST00000229729 FOXD4L6Q3SYB3 417 aaPredicted RBP15.28■□□□□ 0.04
SLC44A4-202ENST00000229729 FOXD4L3Q6VB84 417 aaPredicted RBP15.28■□□□□ 0.04
SLC44A4-202ENST00000229729 FUCA2Q9BTY2 467 aa15.28■□□□□ 0.04
SLC44A4-202ENST00000229729 ARHGEF40Q8TER5 1519 aa15.27■□□□□ 0.04
SLC44A4-202ENST00000229729 RPGRIP1LQ68CZ1 1315 aa15.27■□□□□ 0.04
SLC44A4-202ENST00000229729 PLCB2Q00722 1185 aa15.27■□□□□ 0.04
SLC44A4-202ENST00000229729 IL17RAQ96F46 866 aa15.27■□□□□ 0.04
SLC44A4-202ENST00000229729 FRMPD1Q5SYB0 1578 aa15.27■□□□□ 0.03
SLC44A4-202ENST00000229729 NPATQ14207 1427 aa15.27■□□□□ 0.03
SLC44A4-202ENST00000229729 ESYT1Q9BSJ8 1104 aa15.27■□□□□ 0.03
SLC44A4-202ENST00000229729 THUMPD2Q9BTF0 503 aaKnown RBP15.27■□□□□ 0.03
SLC44A4-202ENST00000229729 SRCIN1Q9C0H9 1055 aa15.27■□□□□ 0.03
SLC44A4-202ENST00000229729 TERF2IPQ9NYB0 399 aa15.27■□□□□ 0.03
SLC44A4-202ENST00000229729 SSH2Q76I76 1423 aa15.26■□□□□ 0.03
SLC44A4-202ENST00000229729 SMTNL1A8MU46 457 aa15.26■□□□□ 0.03
SLC44A4-202ENST00000229729 DDX41Q9UJV9 622 aaKnown RBP15.26■□□□□ 0.03
SLC44A4-202ENST00000229729 CCDC66A2RUB6 948 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms