RNA–Protein interactions for RNA: ENST00000229307.8

NANOG-201, Transcript of Nanog homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NANOG, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-201ENST00000229307 ST18O60284 1047 aa9.76□□□□□ -0.85
NANOG-201ENST00000229307 MARCH6O60337 910 aa9.76□□□□□ -0.85
NANOG-201ENST00000229307 PTCD1O75127 700 aaKnown RBP9.76□□□□□ -0.85
NANOG-201ENST00000229307 CCDC27Q2M243 656 aa9.76□□□□□ -0.85
NANOG-201ENST00000229307 ERICH2A1L162 156 aa9.76□□□□□ -0.85
NANOG-201ENST00000229307 ADGRB3O60242 1522 aa9.76□□□□□ -0.85
NANOG-201ENST00000229307 JCADQ9P266 1359 aa9.76□□□□□ -0.85
NANOG-201ENST00000229307 CLSTN1O94985 981 aa9.76□□□□□ -0.85
NANOG-201ENST00000229307 REC8O95072 547 aa9.76□□□□□ -0.85
NANOG-201ENST00000229307 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.76□□□□□ -0.85
NANOG-201ENST00000229307 SLC3A2P08195 630 aaKnown RBP9.75□□□□□ -0.85
NANOG-201ENST00000229307 PTMSP20962 102 aa9.75□□□□□ -0.85
NANOG-201ENST00000229307 LARP1Q6PKG0 1096 aaKnown RBP9.75□□□□□ -0.85
NANOG-201ENST00000229307 BICDL1Q6ZP65 573 aa9.75□□□□□ -0.85
NANOG-201ENST00000229307 NCOA3Q9Y6Q9 1424 aa9.75□□□□□ -0.85
NANOG-201ENST00000229307 CRBNQ96SW2 442 aa9.75□□□□□ -0.85
NANOG-201ENST00000229307 FLT4P35916 1363 aa9.75□□□□□ -0.85
NANOG-201ENST00000229307 HYPKQ9NX55 129 aa9.74□□□□□ -0.85
NANOG-201ENST00000229307 CSPP1Q1MSJ5 1256 aa9.74□□□□□ -0.85
NANOG-201ENST00000229307 VPS53Q5VIR6 699 aa9.74□□□□□ -0.85
NANOG-201ENST00000229307 SPATA31A6Q5VVP1 1343 aa9.74□□□□□ -0.85
NANOG-201ENST00000229307 PIK3C2GO75747 1445 aa9.74□□□□□ -0.85
NANOG-201ENST00000229307 HIP1O00291 1037 aa9.74□□□□□ -0.85
NANOG-201ENST00000229307 RAD21O60216 631 aa9.74□□□□□ -0.85
NANOG-201ENST00000229307 TPRNQ4KMQ1 711 aa9.74□□□□□ -0.85
NANOG-201ENST00000229307 TTC39AQ5SRH9 613 aa9.74□□□□□ -0.85
NANOG-201ENST00000229307 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.74□□□□□ -0.85
NANOG-201ENST00000229307 NKTRP30414 1462 aaKnown RBP9.74□□□□□ -0.85
NANOG-201ENST00000229307 TET3O43151 1660 aa9.74□□□□□ -0.85
NANOG-201ENST00000229307 SURF6O75683 361 aaKnown RBP9.74□□□□□ -0.85
NANOG-201ENST00000229307 GCP02774 474 aa9.74□□□□□ -0.85
NANOG-201ENST00000229307 RFC4P35249 363 aa9.74□□□□□ -0.85
NANOG-201ENST00000229307 WASHC4Q2M389 1173 aa9.74□□□□□ -0.85
NANOG-201ENST00000229307 NRDCO43847 1150 aa9.73□□□□□ -0.85
NANOG-201ENST00000229307 TCEAL9Q9UHQ7 104 aa9.73□□□□□ -0.85
NANOG-201ENST00000229307 RPGRQ92834 1020 aaKnown RBP9.73□□□□□ -0.85
NANOG-201ENST00000229307 MED14O60244 1454 aa9.73□□□□□ -0.85
NANOG-201ENST00000229307 POLD1P28340 1107 aa9.72□□□□□ -0.85
NANOG-201ENST00000229307 DUSP27Q5VZP5 1158 aa9.72□□□□□ -0.85
NANOG-201ENST00000229307 ZSCAN25Q6NSZ9 544 aa9.72□□□□□ -0.85
NANOG-201ENST00000229307 TSR2Q969E8 191 aaKnown RBP9.72□□□□□ -0.85
NANOG-201ENST00000229307 RASSF8Q8NHQ8 419 aa9.72□□□□□ -0.85
NANOG-201ENST00000229307 ZFYVE9O95405 1425 aa9.72□□□□□ -0.85
NANOG-201ENST00000229307 MCM10Q7L590 875 aa9.72□□□□□ -0.85
NANOG-201ENST00000229307 CNTROBQ8N137 903 aa9.72□□□□□ -0.85
NANOG-201ENST00000229307 DHX16O60231 1041 aaKnown RBP9.72□□□□□ -0.85
NANOG-201ENST00000229307 RXRBP28702 533 aa9.72□□□□□ -0.85
NANOG-201ENST00000229307 PDE3AQ14432 1141 aa9.72□□□□□ -0.85
NANOG-201ENST00000229307 BTG4Q9NY30 223 aa9.72□□□□□ -0.85
NANOG-201ENST00000229307 DBF4Q9UBU7 674 aaPredicted RBP9.72□□□□□ -0.85
NANOG-201ENST00000229307 PCDH11XQ9BZA7 1347 aa9.72□□□□□ -0.85
NANOG-201ENST00000229307 PCDH11YQ9BZA8 1340 aa9.72□□□□□ -0.85
NANOG-201ENST00000229307 SNRPA1P09661 255 aaKnown RBP9.71□□□□□ -0.85
NANOG-201ENST00000229307 ST5P78524 1137 aa9.71□□□□□ -0.85
NANOG-201ENST00000229307 AKAP4Q5JQC9 854 aa9.71□□□□□ -0.85
NANOG-201ENST00000229307 CFAP65Q6ZU64 1925 aaKnown RBP9.71□□□□□ -0.85
NANOG-201ENST00000229307 FYB1O15117 783 aa9.71□□□□□ -0.85
NANOG-201ENST00000229307 PPP1R42Q7Z4L9 355 aa9.71□□□□□ -0.85
NANOG-201ENST00000229307 NOB1Q9ULX3 412 aaKnown RBP9.71□□□□□ -0.85
NANOG-201ENST00000229307 CEP152O94986 1710 aa9.71□□□□□ -0.85
NANOG-201ENST00000229307 CROCC2H7BZ55 1655 aa9.71□□□□□ -0.85
NANOG-201ENST00000229307 CABLES1Q8TDN4 633 aa9.71□□□□□ -0.86
NANOG-201ENST00000229307 TMOD2Q9NZR1 351 aa9.71□□□□□ -0.86
NANOG-201ENST00000229307 CEP126Q9P2H0 1117 aa9.71□□□□□ -0.86
NANOG-201ENST00000229307 IP6K1Q92551 441 aa9.71□□□□□ -0.86
NANOG-201ENST00000229307 TRIM29Q14134 588 aa9.7□□□□□ -0.86
NANOG-201ENST00000229307 INTS3Q68E01 1043 aaKnown RBP9.7□□□□□ -0.86
NANOG-201ENST00000229307 RALYLQ86SE5 291 aaKnown RBP9.7□□□□□ -0.86
NANOG-201ENST00000229307 ASXL1Q8IXJ9 1541 aa9.7□□□□□ -0.86
NANOG-201ENST00000229307 USP21Q9UK80 565 aa9.7□□□□□ -0.86
NANOG-201ENST00000229307 SLIT1O75093 1534 aa9.7□□□□□ -0.86
NANOG-201ENST00000229307 FAM184AQ8NB25 1140 aa9.7□□□□□ -0.86
NANOG-201ENST00000229307 GCC1Q96CN9 775 aa9.7□□□□□ -0.86
NANOG-201ENST00000229307 GBP4Q96PP9 640 aa9.7□□□□□ -0.86
NANOG-201ENST00000229307 FSD1Q9BTV5 496 aa9.7□□□□□ -0.86
NANOG-201ENST00000229307 IQGAP1P46940 1657 aa9.7□□□□□ -0.86
NANOG-201ENST00000229307 EDC4Q6P2E9 1401 aaKnown RBP9.7□□□□□ -0.86
NANOG-201ENST00000229307 EXOC6Q8TAG9 804 aa9.69□□□□□ -0.86
NANOG-201ENST00000229307 ZNF142P52746 1687 aaPredicted RBP9.69□□□□□ -0.86
NANOG-201ENST00000229307 SART3Q15020 963 aaKnown RBP9.69□□□□□ -0.86
NANOG-201ENST00000229307 NFXL1Q6ZNB6 911 aa9.69□□□□□ -0.86
NANOG-201ENST00000229307 AKAP2Q9Y2D5 859 aa9.69□□□□□ -0.86
NANOG-201ENST00000229307 PTMAP06454 111 aaKnown RBP9.69□□□□□ -0.86
NANOG-201ENST00000229307 ATP6V1AP38606 617 aa9.69□□□□□ -0.86
NANOG-201ENST00000229307 ALDH1L2Q3SY69 923 aa9.69□□□□□ -0.86
NANOG-201ENST00000229307 CCAR1Q8IX12 1150 aaKnown RBP9.69□□□□□ -0.86
NANOG-201ENST00000229307 ANO2Q9NQ90 1003 aa9.69□□□□□ -0.86
NANOG-201ENST00000229307 TRMT112Q9UI30 125 aaKnown RBP9.69□□□□□ -0.86
NANOG-201ENST00000229307 FAM135BQ49AJ0 1406 aa9.69□□□□□ -0.86
NANOG-201ENST00000229307 ORAI2Q96SN7 254 aa9.69□□□□□ -0.86
NANOG-201ENST00000229307 STK32BQ9NY57 414 aa9.69□□□□□ -0.86
NANOG-201ENST00000229307 CPLX1O14810 134 aa9.69□□□□□ -0.86
NANOG-201ENST00000229307 RBM5P52756 815 aaKnown RBP eCLIP9.69□□□□□ -0.86
NANOG-201ENST00000229307 ATF7IPQ6VMQ6 1270 aa9.69□□□□□ -0.86
NANOG-201ENST00000229307 NACAP1Q9BZK3 213 aa9.69□□□□□ -0.86
NANOG-201ENST00000229307 H3BQV1 296 aa9.68□□□□□ -0.86
NANOG-201ENST00000229307 NBR1Q14596 966 aa9.68□□□□□ -0.86
NANOG-201ENST00000229307 IFFO2Q5TF58 517 aa9.68□□□□□ -0.86
NANOG-201ENST00000229307 PANK1Q8TE04 598 aa9.68□□□□□ -0.86
NANOG-201ENST00000229307 GCC2Q8IWJ2 1684 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms