RNA–Protein interactions for RNA: ENST00000229268.12

USP5-201, Transcript of ubiquitin specific peptidase 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP5, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-201ENST00000229268 MRPL50Q8N5N7 158 aaKnown RBP17■□□□□ 0.31
USP5-201ENST00000229268 ANKRD24Q8TF21 1146 aa17■□□□□ 0.31
USP5-201ENST00000229268 SLC4A2P04920 1241 aa17■□□□□ 0.31
USP5-201ENST00000229268 LGR6Q9HBX8 967 aa17■□□□□ 0.31
USP5-201ENST00000229268 PIK3C2AO00443 1686 aa17■□□□□ 0.31
USP5-201ENST00000229268 IL17REQ8NFR9 667 aa16.99■□□□□ 0.31
USP5-201ENST00000229268 DDX19BQ9UMR2 479 aa16.99■□□□□ 0.31
USP5-201ENST00000229268 EIF2S2P20042 333 aaKnown RBP16.99■□□□□ 0.31
USP5-201ENST00000229268 CHL1O00533 1208 aa16.98■□□□□ 0.31
USP5-201ENST00000229268 ANP32AP39687 249 aaKnown RBP16.98■□□□□ 0.31
USP5-201ENST00000229268 ZNF428Q96B54 188 aa16.98■□□□□ 0.31
USP5-201ENST00000229268 NRKQ7Z2Y5 1582 aa16.98■□□□□ 0.31
USP5-201ENST00000229268 F6X3S4 739 aa16.98■□□□□ 0.31
USP5-201ENST00000229268 RWDD1Q9H446 243 aaPredicted RBP16.98■□□□□ 0.31
USP5-201ENST00000229268 MS4A1P11836 297 aa16.97■□□□□ 0.31
USP5-201ENST00000229268 ALDH1L2Q3SY69 923 aa16.97■□□□□ 0.31
USP5-201ENST00000229268 ZNF530Q6P9A1 599 aaPredicted RBP16.97■□□□□ 0.31
USP5-201ENST00000229268 CADPS2Q86UW7 1296 aa16.97■□□□□ 0.31
USP5-201ENST00000229268 APBB1O00213 710 aa16.97■□□□□ 0.31
USP5-201ENST00000229268 BACH2Q9BYV9 841 aa16.97■□□□□ 0.31
USP5-201ENST00000229268 ANO8Q9HCE9 1232 aaPredicted RBP16.97■□□□□ 0.31
USP5-201ENST00000229268 PDZRN3Q9UPQ7 1066 aa16.97■□□□□ 0.31
USP5-201ENST00000229268 ARHGEF10O15013 1369 aa16.97■□□□□ 0.31
USP5-201ENST00000229268 C1orf167Q5SNV9 1468 aa16.97■□□□□ 0.31
USP5-201ENST00000229268 ARHGEF25Q86VW2 580 aa16.97■□□□□ 0.31
USP5-201ENST00000229268 FMN2Q9NZ56 1722 aa16.96■□□□□ 0.31
USP5-201ENST00000229268 G2E3Q7L622 706 aa16.96■□□□□ 0.31
USP5-201ENST00000229268 ZNF142P52746 1687 aaPredicted RBP16.95■□□□□ 0.3
USP5-201ENST00000229268 MSH6P52701 1360 aa16.94■□□□□ 0.3
USP5-201ENST00000229268 KCNQ3O43525 872 aa16.93■□□□□ 0.3
USP5-201ENST00000229268 USP35Q9P2H5 1018 aa16.93■□□□□ 0.3
USP5-201ENST00000229268 ANXA1P04083 346 aa16.93■□□□□ 0.3
USP5-201ENST00000229268 TEFQ10587 303 aa16.93■□□□□ 0.3
USP5-201ENST00000229268 LNPKQ9C0E8 428 aa16.92■□□□□ 0.3
USP5-201ENST00000229268 ZBTB40Q9NUA8 1239 aa16.92■□□□□ 0.3
USP5-201ENST00000229268 C1orf141Q5JVX7 400 aa16.91■□□□□ 0.3
USP5-201ENST00000229268 DEKP35659 375 aaKnown RBP16.91■□□□□ 0.3
USP5-201ENST00000229268 KDRP35968 1356 aa16.91■□□□□ 0.3
USP5-201ENST00000229268 DLG5Q8TDM6 1919 aa16.91■□□□□ 0.3
USP5-201ENST00000229268 FKBP5Q13451 457 aaPredicted RBP16.9■□□□□ 0.3
USP5-201ENST00000229268 TAF7Q15545 349 aaPredicted RBP16.9■□□□□ 0.3
USP5-201ENST00000229268 STK31Q9BXU1 1019 aa16.9■□□□□ 0.3
USP5-201ENST00000229268 SLAIN2Q9P270 581 aa16.9■□□□□ 0.3
USP5-201ENST00000229268 NPHP3Q7Z494 1330 aa16.9■□□□□ 0.3
USP5-201ENST00000229268 SLC4A3P48751 1232 aa16.9■□□□□ 0.3
USP5-201ENST00000229268 BRINP3Q76B58 766 aa16.9■□□□□ 0.3
USP5-201ENST00000229268 ZBTB7BO15156 539 aaPredicted RBP16.89■□□□□ 0.29
USP5-201ENST00000229268 PLEKHO1Q53GL0 409 aaPredicted RBP16.89■□□□□ 0.29
USP5-201ENST00000229268 MAP3K5Q99683 1374 aa16.89■□□□□ 0.29
USP5-201ENST00000229268 RAPGEF4Q8WZA2 1011 aa16.89■□□□□ 0.29
USP5-201ENST00000229268 API5Q9BZZ5 524 aaKnown RBP16.89■□□□□ 0.29
USP5-201ENST00000229268 STRN4Q9NRL3 753 aa16.89■□□□□ 0.29
USP5-201ENST00000229268 FAM161AQ3B820 660 aa16.88■□□□□ 0.29
USP5-201ENST00000229268 ANKRD45Q5TZF3 282 aa16.88■□□□□ 0.29
USP5-201ENST00000229268 CRB1P82279 1406 aa16.88■□□□□ 0.29
USP5-201ENST00000229268 PRDM11Q9NQV5 511 aa16.87■□□□□ 0.29
USP5-201ENST00000229268 BTBD11A6QL63 1104 aa16.87■□□□□ 0.29
USP5-201ENST00000229268 HDGFL1Q5TGJ6 251 aa16.87■□□□□ 0.29
USP5-201ENST00000229268 MST1RQ04912 1400 aa16.87■□□□□ 0.29
USP5-201ENST00000229268 SLC39A6Q13433 755 aa16.86■□□□□ 0.29
USP5-201ENST00000229268 C8orf34Q49A92 452 aa16.86■□□□□ 0.29
USP5-201ENST00000229268 SEC24BO95487 1268 aa16.86■□□□□ 0.29
USP5-201ENST00000229268 MEIS3Q99687 375 aa16.85■□□□□ 0.29
USP5-201ENST00000229268 PHAXQ9H814 394 aaKnown RBP16.85■□□□□ 0.29
USP5-201ENST00000229268 ZBTB47Q9UFB7 747 aaPredicted RBP16.85■□□□□ 0.29
USP5-201ENST00000229268 PRAMEF22A3QJZ6 481 aa16.85■□□□□ 0.29
USP5-201ENST00000229268 NBR1Q14596 966 aa16.85■□□□□ 0.29
USP5-201ENST00000229268 KIAA0232Q92628 1395 aa16.85■□□□□ 0.29
USP5-201ENST00000229268 ERBB3P21860 1342 aa16.84■□□□□ 0.29
USP5-201ENST00000229268 ARHGAP45Q92619 1136 aa16.83■□□□□ 0.28
USP5-201ENST00000229268 TOM1L2Q6ZVM7 507 aa16.83■□□□□ 0.28
USP5-201ENST00000229268 PIP4K2AP48426 406 aaPredicted RBP16.82■□□□□ 0.28
USP5-201ENST00000229268 FLIIQ13045 1269 aa16.82■□□□□ 0.28
USP5-201ENST00000229268 CCDC30Q5VVM6 783 aa16.82■□□□□ 0.28
USP5-201ENST00000229268 IPO9Q96P70 1041 aaKnown RBP16.82■□□□□ 0.28
USP5-201ENST00000229268 SIRT2Q8IXJ6 389 aa16.82■□□□□ 0.28
USP5-201ENST00000229268 AKAP4Q5JQC9 854 aa16.81■□□□□ 0.28
USP5-201ENST00000229268 RTL1A6NKG5 1358 aa16.81■□□□□ 0.28
USP5-201ENST00000229268 ABCC4O15439 1325 aa16.81■□□□□ 0.28
USP5-201ENST00000229268 RNMTO43148 476 aaKnown RBP16.81■□□□□ 0.28
USP5-201ENST00000229268 TATP17735 454 aaPredicted RBP16.81■□□□□ 0.28
USP5-201ENST00000229268 AIMP1Q12904 312 aaKnown RBP16.81■□□□□ 0.28
USP5-201ENST00000229268 NOP58Q9Y2X3 529 aaKnown RBP16.81■□□□□ 0.28
USP5-201ENST00000229268 USP19O94966 1318 aa16.81■□□□□ 0.28
USP5-201ENST00000229268 SPATA31A3Q5VYP0 1347 aa16.81■□□□□ 0.28
USP5-201ENST00000229268 KIF24Q5T7B8 1368 aa16.81■□□□□ 0.28
USP5-201ENST00000229268 NFATC2IPQ8NCF5 419 aa16.8■□□□□ 0.28
USP5-201ENST00000229268 DDX54Q8TDD1 881 aaKnown RBP16.8■□□□□ 0.28
USP5-201ENST00000229268 CHPF2Q9P2E5 772 aa16.8■□□□□ 0.28
USP5-201ENST00000229268 NFAT5O94916 1531 aa16.8■□□□□ 0.28
USP5-201ENST00000229268 HTATSF1O43719 755 aaKnown RBP16.8■□□□□ 0.28
USP5-201ENST00000229268 EVA1CP58658 441 aa16.8■□□□□ 0.28
USP5-201ENST00000229268 AAMPQ13685 434 aa16.8■□□□□ 0.28
USP5-201ENST00000229268 LMTK3Q96Q04 1460 aa16.8■□□□□ 0.28
USP5-201ENST00000229268 STRCP1A6NGW2 1772 aa16.79■□□□□ 0.28
USP5-201ENST00000229268 HDAC1Q13547 482 aaPredicted RBP16.79■□□□□ 0.28
USP5-201ENST00000229268 LTN1O94822 1766 aa16.79■□□□□ 0.28
USP5-201ENST00000229268 A0A0G2JS52 829 aa16.79■□□□□ 0.28
USP5-201ENST00000229268 BRPF1P55201 1214 aaPredicted RBP16.79■□□□□ 0.28
USP5-201ENST00000229268 AMOTQ4VCS5 1084 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms