RNA–Protein interactions for RNA: ENST00000225983.10

HDAC5-201, Transcript of histone deacetylase 5, humanhuman

APPRIS P3 TSL 5 BASIC

Gene HDAC5, Length 5,326 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-201ENST00000225983 FAM135AQ9P2D6 1515 aa19.19■□□□□ 0.66
HDAC5-201ENST00000225983 LAMC3Q9Y6N6 1575 aa19.19■□□□□ 0.66
HDAC5-201ENST00000225983 PRM3Q9NNZ6 103 aa19.18■□□□□ 0.66
HDAC5-201ENST00000225983 SCAF11Q99590 1463 aaKnown RBP19.18■□□□□ 0.66
HDAC5-201ENST00000225983 SPATA32Q96LK8 384 aa19.17■□□□□ 0.66
HDAC5-201ENST00000225983 ABCC11Q96J66 1382 aa19.17■□□□□ 0.66
HDAC5-201ENST00000225983 CD109Q6YHK3 1445 aa19.17■□□□□ 0.66
HDAC5-201ENST00000225983 NOS1P29475 1434 aa19.17■□□□□ 0.66
HDAC5-201ENST00000225983 PTPRKQ15262 1439 aa19.17■□□□□ 0.66
HDAC5-201ENST00000225983 SPINK5Q9NQ38 1064 aaPredicted RBP19.17■□□□□ 0.66
HDAC5-201ENST00000225983 IDI1Q13907 227 aa19.16■□□□□ 0.66
HDAC5-201ENST00000225983 PRDM11Q9NQV5 511 aa19.16■□□□□ 0.66
HDAC5-201ENST00000225983 MAPKBP1O60336 1514 aa19.16■□□□□ 0.66
HDAC5-201ENST00000225983 THOC2Q8NI27 1593 aaKnown RBP19.16■□□□□ 0.66
HDAC5-201ENST00000225983 IGHDP01880 384 aa19.16■□□□□ 0.66
HDAC5-201ENST00000225983 IKQ13123 557 aaPredicted RBP19.16■□□□□ 0.66
HDAC5-201ENST00000225983 ZSCAN31Q96LW9 406 aaPredicted RBP19.15■□□□□ 0.66
HDAC5-201ENST00000225983 SYCE3A1L190 88 aa19.15■□□□□ 0.66
HDAC5-201ENST00000225983 NUP133Q8WUM0 1156 aa19.15■□□□□ 0.66
HDAC5-201ENST00000225983 TBC1D2Q9BYX2 928 aa19.15■□□□□ 0.66
HDAC5-201ENST00000225983 URB2Q14146 1524 aaKnown RBP19.15■□□□□ 0.66
HDAC5-201ENST00000225983 KIF1BPQ96EK5 621 aa19.15■□□□□ 0.66
HDAC5-201ENST00000225983 DDX11Q96FC9 970 aa19.15■□□□□ 0.66
HDAC5-201ENST00000225983 CEP126Q9P2H0 1117 aa19.15■□□□□ 0.66
HDAC5-201ENST00000225983 SERPINC1P01008 464 aa19.14■□□□□ 0.66
HDAC5-201ENST00000225983 EPS15P42566 896 aa19.14■□□□□ 0.66
HDAC5-201ENST00000225983 JMYQ8N9B5 988 aa19.14■□□□□ 0.66
HDAC5-201ENST00000225983 SLC3A2P08195 630 aaKnown RBP19.14■□□□□ 0.65
HDAC5-201ENST00000225983 GNL3LQ9NVN8 582 aaKnown RBP19.14■□□□□ 0.65
HDAC5-201ENST00000225983 CCDC69A6NI79 296 aa19.14■□□□□ 0.65
HDAC5-201ENST00000225983 PRPF40BQ6NWY9 871 aaKnown RBP19.14■□□□□ 0.65
HDAC5-201ENST00000225983 FERMT3Q86UX7 667 aa19.14■□□□□ 0.65
HDAC5-201ENST00000225983 OFD1O75665 1012 aa19.13■□□□□ 0.65
HDAC5-201ENST00000225983 RUFY1Q96T51 708 aa19.13■□□□□ 0.65
HDAC5-201ENST00000225983 MPHOSPH8Q99549 860 aa19.13■□□□□ 0.65
HDAC5-201ENST00000225983 NACAP1Q9BZK3 213 aa19.13■□□□□ 0.65
HDAC5-201ENST00000225983 CCDC83Q8IWF9 413 aa19.13■□□□□ 0.65
HDAC5-201ENST00000225983 TRIM22Q8IYM9 498 aa19.13■□□□□ 0.65
HDAC5-201ENST00000225983 CAGE1Q8TC20 777 aa19.13■□□□□ 0.65
HDAC5-201ENST00000225983 SETQ01105 290 aaPredicted RBP19.13■□□□□ 0.65
HDAC5-201ENST00000225983 BIVM-ERCC5R4GMW8 1640 aa19.13■□□□□ 0.65
HDAC5-201ENST00000225983 FILIP1LQ4L180 1135 aa19.12■□□□□ 0.65
HDAC5-201ENST00000225983 WASLO00401 505 aaPredicted RBP19.12■□□□□ 0.65
HDAC5-201ENST00000225983 TAF7Q15545 349 aaPredicted RBP19.12■□□□□ 0.65
HDAC5-201ENST00000225983 NUP62CLQ9H1M0 184 aa19.12■□□□□ 0.65
HDAC5-201ENST00000225983 PPP6R1Q9UPN7 881 aa19.12■□□□□ 0.65
HDAC5-201ENST00000225983 TXLNAP40222 546 aa19.11■□□□□ 0.65
HDAC5-201ENST00000225983 HSP90B2PQ58FF3 399 aa19.11■□□□□ 0.65
HDAC5-201ENST00000225983 LRRFIP2Q9Y608 721 aaKnown RBP19.11■□□□□ 0.65
HDAC5-201ENST00000225983 PATL2C9JE40 543 aaKnown RBP19.11■□□□□ 0.65
HDAC5-201ENST00000225983 BOLA2Q9H3K6 86 aa19.11■□□□□ 0.65
HDAC5-201ENST00000225983 FAM83GA6ND36 823 aa19.11■□□□□ 0.65
HDAC5-201ENST00000225983 ESPNB1AK53 854 aa19.11■□□□□ 0.65
HDAC5-201ENST00000225983 ZNF608Q9ULD9 1512 aaPredicted RBP19.11■□□□□ 0.65
HDAC5-201ENST00000225983 FBLN1P23142 703 aa19.11■□□□□ 0.65
HDAC5-201ENST00000225983 HMGN5P82970 282 aaKnown RBP19.11■□□□□ 0.65
HDAC5-201ENST00000225983 GLRX3O76003 335 aaKnown RBP19.1■□□□□ 0.65
HDAC5-201ENST00000225983 SSFA2P28290 1259 aa19.1■□□□□ 0.65
HDAC5-201ENST00000225983 KLHL34Q8N239 644 aa19.1■□□□□ 0.65
HDAC5-201ENST00000225983 CDK5RAP3Q96JB5 506 aa19.1■□□□□ 0.65
HDAC5-201ENST00000225983 KRT32Q14532 448 aa19.1■□□□□ 0.65
HDAC5-201ENST00000225983 ZSCAN25Q6NSZ9 544 aa19.1■□□□□ 0.65
HDAC5-201ENST00000225983 CAMK4Q16566 473 aa19.1■□□□□ 0.65
HDAC5-201ENST00000225983 KCNH5Q8NCM2 988 aa19.1■□□□□ 0.65
HDAC5-201ENST00000225983 RAB11FIP3O75154 756 aa19.1■□□□□ 0.65
HDAC5-201ENST00000225983 C14orf93Q9H972 538 aaKnown RBP19.1■□□□□ 0.65
HDAC5-201ENST00000225983 MPRIPQ6WCQ1 1025 aa19.09■□□□□ 0.65
HDAC5-201ENST00000225983 MTERF4Q7Z6M4 381 aaKnown RBP19.09■□□□□ 0.65
HDAC5-201ENST00000225983 ACBD3Q9H3P7 528 aa19.09■□□□□ 0.65
HDAC5-201ENST00000225983 IDH1O75874 414 aaKnown RBP19.09■□□□□ 0.65
HDAC5-201ENST00000225983 MAP7D2Q96T17 732 aa19.09■□□□□ 0.65
HDAC5-201ENST00000225983 MYD88Q99836 296 aa19.09■□□□□ 0.65
HDAC5-201ENST00000225983 GPATCH8Q9UKJ3 1502 aaKnown RBP19.09■□□□□ 0.65
HDAC5-201ENST00000225983 NUTM2BA6NNL0 878 aaPredicted RBP19.09■□□□□ 0.65
HDAC5-201ENST00000225983 NUTM2EB1AL46 878 aaPredicted RBP19.09■□□□□ 0.65
HDAC5-201ENST00000225983 PTCD1O75127 700 aaKnown RBP19.09■□□□□ 0.65
HDAC5-201ENST00000225983 NUTM2AQ8IVF1 878 aaPredicted RBP19.09■□□□□ 0.65
HDAC5-201ENST00000225983 SMARCE1Q969G3 411 aa19.09■□□□□ 0.65
HDAC5-201ENST00000225983 AK7Q96M32 723 aa19.09■□□□□ 0.65
HDAC5-201ENST00000225983 MAGEC2Q9UBF1 373 aaPredicted RBP19.09■□□□□ 0.65
HDAC5-201ENST00000225983 CFAP45Q9UL16 551 aa19.09■□□□□ 0.65
HDAC5-201ENST00000225983 CTNNA3Q9UI47 895 aa19.08■□□□□ 0.65
HDAC5-201ENST00000225983 CT47A1Q5JQC4 288 aaPredicted RBP19.08■□□□□ 0.64
HDAC5-201ENST00000225983 MBIPQ9NS73 344 aa19.08■□□□□ 0.64
HDAC5-201ENST00000225983 TDO2P48775 406 aa19.08■□□□□ 0.64
HDAC5-201ENST00000225983 ATP2B2Q01814 1243 aa19.07■□□□□ 0.64
HDAC5-201ENST00000225983 CCDC8Q9H0W5 538 aaPredicted RBP19.07■□□□□ 0.64
HDAC5-201ENST00000225983 TNPO1Q92973 898 aaKnown RBP19.07■□□□□ 0.64
HDAC5-201ENST00000225983 LARP6Q9BRS8 491 aaKnown RBP19.07■□□□□ 0.64
HDAC5-201ENST00000225983 TBC1D9Q6ZT07 1266 aa19.06■□□□□ 0.64
HDAC5-201ENST00000225983 CCP110O43303 1012 aa19.06■□□□□ 0.64
HDAC5-201ENST00000225983 FAM177A1Q8N128 213 aaPredicted RBP19.06■□□□□ 0.64
HDAC5-201ENST00000225983 AMOTL2Q9Y2J4 779 aa19.06■□□□□ 0.64
HDAC5-201ENST00000225983 FLIIQ13045 1269 aa19.05■□□□□ 0.64
HDAC5-201ENST00000225983 FILIP1Q7Z7B0 1213 aa19.05■□□□□ 0.64
HDAC5-201ENST00000225983 DNAAF4Q8WXU2 420 aa19.05■□□□□ 0.64
HDAC5-201ENST00000225983 TSHZ3Q63HK5 1081 aa19.05■□□□□ 0.64
HDAC5-201ENST00000225983 LARP1Q6PKG0 1096 aaKnown RBP19.05■□□□□ 0.64
HDAC5-201ENST00000225983 POGZQ7Z3K3 1410 aa19.05■□□□□ 0.64
HDAC5-201ENST00000225983 RAI14Q9P0K7 980 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms