RNA–Protein interactions for RNA: ENST00000222399.10

LAMB1-201, Transcript of laminin subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMB1, Length 5,725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-201ENST00000222399 ATP2B2Q01814 1243 aa16.1■□□□□ 0.17
LAMB1-201ENST00000222399 TMEM132AQ24JP5 1023 aa16.1■□□□□ 0.17
LAMB1-201ENST00000222399 MTERF4Q7Z6M4 381 aaKnown RBP16.1■□□□□ 0.17
LAMB1-201ENST00000222399 PATL2C9JE40 543 aaKnown RBP16.09■□□□□ 0.17
LAMB1-201ENST00000222399 SF3B2Q13435 895 aaKnown RBP16.09■□□□□ 0.17
LAMB1-201ENST00000222399 WWC2Q6AWC2 1192 aa16.09■□□□□ 0.17
LAMB1-201ENST00000222399 CIZ1Q9ULV3 898 aaPredicted RBP16.09■□□□□ 0.17
LAMB1-201ENST00000222399 TTLL5Q6EMB2 1281 aa16.09■□□□□ 0.17
LAMB1-201ENST00000222399 NUP133Q8WUM0 1156 aa16.09■□□□□ 0.17
LAMB1-201ENST00000222399 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.09■□□□□ 0.179e-7■■■■■ 105.8
LAMB1-201ENST00000222399 ZNHIT6Q9NWK9 470 aaKnown RBP16.09■□□□□ 0.17
LAMB1-201ENST00000222399 SYCP1Q15431 976 aa16.09■□□□□ 0.17
LAMB1-201ENST00000222399 TMEM57Q8N5G2 664 aa16.09■□□□□ 0.17
LAMB1-201ENST00000222399 STARD3NLO95772 234 aa16.09■□□□□ 0.17
LAMB1-201ENST00000222399 CWC27Q6UX04 472 aaKnown RBP16.09■□□□□ 0.17
LAMB1-201ENST00000222399 JAKMIP1Q96N16 626 aaKnown RBP16.09■□□□□ 0.17
LAMB1-201ENST00000222399 SERPINC1P01008 464 aa16.08■□□□□ 0.17
LAMB1-201ENST00000222399 BRPF1P55201 1214 aaPredicted RBP16.08■□□□□ 0.17
LAMB1-201ENST00000222399 ALDH1L2Q3SY69 923 aa16.08■□□□□ 0.17
LAMB1-201ENST00000222399 CD109Q6YHK3 1445 aa16.08■□□□□ 0.17
LAMB1-201ENST00000222399 RAB11FIP3O75154 756 aa16.08■□□□□ 0.16
LAMB1-201ENST00000222399 IGHMBP2P38935 993 aaKnown RBP16.08■□□□□ 0.16
LAMB1-201ENST00000222399 TDO2P48775 406 aa16.08■□□□□ 0.16
LAMB1-201ENST00000222399 PPP6R1Q9UPN7 881 aa16.08■□□□□ 0.16
LAMB1-201ENST00000222399 FAM135AQ9P2D6 1515 aa16.08■□□□□ 0.16
LAMB1-201ENST00000222399 DUSP27Q5VZP5 1158 aa16.08■□□□□ 0.16
LAMB1-201ENST00000222399 UBAC1Q9BSL1 405 aa16.08■□□□□ 0.16
LAMB1-201ENST00000222399 IL1RAPL2Q9NP60 686 aa16.08■□□□□ 0.16
LAMB1-201ENST00000222399 CFAP45Q9UL16 551 aa16.07■□□□□ 0.16
LAMB1-201ENST00000222399 LAMC3Q9Y6N6 1575 aa16.07■□□□□ 0.16
LAMB1-201ENST00000222399 STK11IPQ8N1F8 1099 aa16.07■□□□□ 0.16
LAMB1-201ENST00000222399 WASF1Q92558 559 aa16.07■□□□□ 0.16
LAMB1-201ENST00000222399 KIF1BPQ96EK5 621 aa16.06■□□□□ 0.16
LAMB1-201ENST00000222399 RAI14Q9P0K7 980 aa16.06■□□□□ 0.16
LAMB1-201ENST00000222399 CCDC184Q52MB2 194 aa16.06■□□□□ 0.16
LAMB1-201ENST00000222399 ABCC5O15440 1437 aa16.06■□□□□ 0.16
LAMB1-201ENST00000222399 ZC3H6P61129 1189 aaKnown RBP16.06■□□□□ 0.16
LAMB1-201ENST00000222399 XPCQ01831 940 aaPredicted RBP16.06■□□□□ 0.16
LAMB1-201ENST00000222399 ADGRL1O94910 1474 aa16.06■□□□□ 0.16
LAMB1-201ENST00000222399 AMOTQ4VCS5 1084 aa16.06■□□□□ 0.16
LAMB1-201ENST00000222399 PPFIBP1Q86W92 1011 aa16.06■□□□□ 0.16
LAMB1-201ENST00000222399 VSIG10Q8N0Z9 540 aa16.06■□□□□ 0.16
LAMB1-201ENST00000222399 SPATA32Q96LK8 384 aa16.06■□□□□ 0.16
LAMB1-201ENST00000222399 MAP7D2Q96T17 732 aa16.06■□□□□ 0.16
LAMB1-201ENST00000222399 LUC7LQ9NQ29 371 aaKnown RBP16.06■□□□□ 0.16
LAMB1-201ENST00000222399 CBFA2T2O43439 604 aa16.06■□□□□ 0.16
LAMB1-201ENST00000222399 TXLNBQ8N3L3 684 aa16.06■□□□□ 0.16
LAMB1-201ENST00000222399 DCAF8L1A6NGE4 600 aa16.05■□□□□ 0.16
LAMB1-201ENST00000222399 HMGN5P82970 282 aaKnown RBP16.05■□□□□ 0.16
LAMB1-201ENST00000222399 AKAP2Q9Y2D5 859 aa16.05■□□□□ 0.16
LAMB1-201ENST00000222399 IMMTQ16891 758 aaKnown RBP16.05■□□□□ 0.16
LAMB1-201ENST00000222399 LARP1Q6PKG0 1096 aaKnown RBP16.05■□□□□ 0.16
LAMB1-201ENST00000222399 LRP2BPQ9P2M1 347 aa16.05■□□□□ 0.16
LAMB1-201ENST00000222399 NOM1Q5C9Z4 860 aaKnown RBP16.04■□□□□ 0.16
LAMB1-201ENST00000222399 WAPLQ7Z5K2 1190 aa16.04■□□□□ 0.16
LAMB1-201ENST00000222399 RBM5P52756 815 aaKnown RBP eCLIP16.04■□□□□ 0.161e-6■■□□□ 13.9
LAMB1-201ENST00000222399 MAP3K1Q13233 1512 aa16.04■□□□□ 0.16
LAMB1-201ENST00000222399 TAF7Q15545 349 aaPredicted RBP16.04■□□□□ 0.16
LAMB1-201ENST00000222399 MCM10Q7L590 875 aa16.04■□□□□ 0.16
LAMB1-201ENST00000222399 SPC24Q8NBT2 197 aa16.03■□□□□ 0.16
LAMB1-201ENST00000222399 GLRX3O76003 335 aaKnown RBP16.03■□□□□ 0.16
LAMB1-201ENST00000222399 NUTM1Q86Y26 1132 aa16.03■□□□□ 0.16
LAMB1-201ENST00000222399 MX1P20591 662 aa16.03■□□□□ 0.16
LAMB1-201ENST00000222399 AIDAQ96BJ3 306 aa16.03■□□□□ 0.16
LAMB1-201ENST00000222399 NKTRP30414 1462 aaKnown RBP16.03■□□□□ 0.16
LAMB1-201ENST00000222399 DCTN1Q14203 1278 aa16.03■□□□□ 0.16
LAMB1-201ENST00000222399 ZNF652Q9Y2D9 606 aa16.03■□□□□ 0.16
LAMB1-201ENST00000222399 TMOD3Q9NYL9 352 aa16.02■□□□□ 0.15
LAMB1-201ENST00000222399 IDH1O75874 414 aaKnown RBP16.02■□□□□ 0.15
LAMB1-201ENST00000222399 METTL24Q5JXM2 366 aa16.02■□□□□ 0.15
LAMB1-201ENST00000222399 MIS18AQ9NYP9 233 aa16.02■□□□□ 0.15
LAMB1-201ENST00000222399 EXOC6BQ9Y2D4 811 aa16.02■□□□□ 0.15
LAMB1-201ENST00000222399 BMP2KQ9NSY1 1161 aaPredicted RBP16.01■□□□□ 0.15
LAMB1-201ENST00000222399 PLB1Q6P1J6 1458 aa16.01■□□□□ 0.15
LAMB1-201ENST00000222399 CASTP20810 708 aaKnown RBP16.01■□□□□ 0.15
LAMB1-201ENST00000222399 RARSP54136 660 aaKnown RBP16.01■□□□□ 0.15
LAMB1-201ENST00000222399 BCL11BQ9C0K0 894 aaPredicted RBP16.01■□□□□ 0.15
LAMB1-201ENST00000222399 NUP62CLQ9H1M0 184 aa16.01■□□□□ 0.15
LAMB1-201ENST00000222399 CEP57L1Q8IYX8 460 aa16.01■□□□□ 0.15
LAMB1-201ENST00000222399 ZHX3Q9H4I2 956 aa16.01■□□□□ 0.15
LAMB1-201ENST00000222399 DEF6Q9H4E7 631 aa16.01■□□□□ 0.15
LAMB1-201ENST00000222399 PPP1R1BQ9UD71 204 aaPredicted RBP16■□□□□ 0.15
LAMB1-201ENST00000222399 GRIN2AQ12879 1464 aa16■□□□□ 0.15
LAMB1-201ENST00000222399 THUMPD2Q9BTF0 503 aaKnown RBP16■□□□□ 0.15
LAMB1-201ENST00000222399 TANGO6Q9C0B7 1094 aa16■□□□□ 0.15
LAMB1-201ENST00000222399 CEP131Q9UPN4 1083 aa16■□□□□ 0.15
LAMB1-201ENST00000222399 U3KPZ7 1027 aaPredicted RBP16■□□□□ 0.15
LAMB1-201ENST00000222399 NSD2O96028 1365 aa16■□□□□ 0.15
LAMB1-201ENST00000222399 KRI1Q8N9T8 703 aaKnown RBP16■□□□□ 0.15
LAMB1-201ENST00000222399 GRPEL1Q9HAV7 217 aa16■□□□□ 0.15
LAMB1-201ENST00000222399 NME9Q86XW9 330 aa15.99■□□□□ 0.15
LAMB1-201ENST00000222399 BICDL1Q6ZP65 573 aa15.99■□□□□ 0.15
LAMB1-201ENST00000222399 ZSCAN29Q8IWY8 852 aaPredicted RBP15.99■□□□□ 0.15
LAMB1-201ENST00000222399 SSH1Q8WYL5 1049 aa15.99■□□□□ 0.15
LAMB1-201ENST00000222399 ZNF287Q9HBT7 754 aa15.99■□□□□ 0.15
LAMB1-201ENST00000222399 NCOA1Q15788 1441 aa15.99■□□□□ 0.15
LAMB1-201ENST00000222399 WASLO00401 505 aaPredicted RBP15.99■□□□□ 0.15
LAMB1-201ENST00000222399 ERLIN2O94905 339 aa15.99■□□□□ 0.15
LAMB1-201ENST00000222399 CWC15Q9P013 229 aaKnown RBP15.99■□□□□ 0.15
LAMB1-201ENST00000222399 MYD88Q99836 296 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms