RNA–Protein interactions for RNA: ENST00000222388.6

ABCF2-201, Transcript of ATP binding cassette subfamily F member 2, humanhuman

TSL 5 BASIC

Gene ABCF2, Length 2,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF2-201ENST00000222388 SLIT3O75094 1523 aa16.23■□□□□ 0.19
ABCF2-201ENST00000222388 AMPHP49418 695 aa16.23■□□□□ 0.19
ABCF2-201ENST00000222388 UPF2Q9HAU5 1272 aaKnown RBP16.23■□□□□ 0.19
ABCF2-201ENST00000222388 MED1Q15648 1581 aaPredicted RBP16.22■□□□□ 0.19
ABCF2-201ENST00000222388 GCP02774 474 aa16.22■□□□□ 0.19
ABCF2-201ENST00000222388 RSPH6AQ9H0K4 717 aa16.22■□□□□ 0.19
ABCF2-201ENST00000222388 PHRF1Q9P1Y6 1649 aaKnown RBP16.22■□□□□ 0.19
ABCF2-201ENST00000222388 KIF16BQ96L93 1317 aa16.22■□□□□ 0.19
ABCF2-201ENST00000222388 PRKAR2BP31323 418 aa16.21■□□□□ 0.19
ABCF2-201ENST00000222388 HDAC1Q13547 482 aaPredicted RBP16.21■□□□□ 0.19
ABCF2-201ENST00000222388 BECN1Q14457 450 aa16.21■□□□□ 0.19
ABCF2-201ENST00000222388 CABLES1Q8TDN4 633 aa16.21■□□□□ 0.19
ABCF2-201ENST00000222388 FLT4P35916 1363 aa16.21■□□□□ 0.19
ABCF2-201ENST00000222388 HSP90AB2PQ58FF8 381 aa16.21■□□□□ 0.19
ABCF2-201ENST00000222388 CERKQ8TCT0 537 aa16.21■□□□□ 0.19
ABCF2-201ENST00000222388 AHDC1Q5TGY3 1603 aaPredicted RBP16.2■□□□□ 0.18
ABCF2-201ENST00000222388 IPO8O15397 1037 aaKnown RBP16.2■□□□□ 0.18
ABCF2-201ENST00000222388 ALDH1L2Q3SY69 923 aa16.2■□□□□ 0.18
ABCF2-201ENST00000222388 TMEM57Q8N5G2 664 aa16.2■□□□□ 0.18
ABCF2-201ENST00000222388 CRYBG1Q9Y4K1 1723 aa16.2■□□□□ 0.18
ABCF2-201ENST00000222388 PHLPP1O60346 1717 aa16.19■□□□□ 0.18
ABCF2-201ENST00000222388 GSE1Q14687 1217 aa16.19■□□□□ 0.18
ABCF2-201ENST00000222388 TBC1D32Q96NH3 1257 aa16.19■□□□□ 0.18
ABCF2-201ENST00000222388 ZC3H6P61129 1189 aaKnown RBP16.18■□□□□ 0.18
ABCF2-201ENST00000222388 HOXC9P31274 260 aa16.17■□□□□ 0.18
ABCF2-201ENST00000222388 ZNF428Q96B54 188 aa16.17■□□□□ 0.18
ABCF2-201ENST00000222388 ZBTB40Q9NUA8 1239 aa16.17■□□□□ 0.18
ABCF2-201ENST00000222388 FRAT2O75474 233 aaPredicted RBP16.17■□□□□ 0.18
ABCF2-201ENST00000222388 HMOX1P09601 288 aa16.17■□□□□ 0.18
ABCF2-201ENST00000222388 IL13P35225 146 aa16.17■□□□□ 0.18
ABCF2-201ENST00000222388 EIF4A2Q14240 407 aaKnown RBP16.17■□□□□ 0.18
ABCF2-201ENST00000222388 NFE2L2Q16236 605 aa16.17■□□□□ 0.18
ABCF2-201ENST00000222388 DLG5Q8TDM6 1919 aa16.17■□□□□ 0.18
ABCF2-201ENST00000222388 HAP1P54257 671 aaPredicted RBP16.16■□□□□ 0.18
ABCF2-201ENST00000222388 PHACTR3Q96KR7 559 aa16.16■□□□□ 0.18
ABCF2-201ENST00000222388 RTL1A6NKG5 1358 aa16.16■□□□□ 0.18
ABCF2-201ENST00000222388 KIF24Q5T7B8 1368 aa16.16■□□□□ 0.18
ABCF2-201ENST00000222388 ABCA3Q99758 1704 aa16.16■□□□□ 0.18
ABCF2-201ENST00000222388 ARHGEF25Q86VW2 580 aa16.16■□□□□ 0.18
ABCF2-201ENST00000222388 SMC5Q8IY18 1101 aa16.16■□□□□ 0.18
ABCF2-201ENST00000222388 LRRC59Q96AG4 307 aaKnown RBP16.16■□□□□ 0.18
ABCF2-201ENST00000222388 BRPF1P55201 1214 aaPredicted RBP16.15■□□□□ 0.18
ABCF2-201ENST00000222388 CALD1Q05682 793 aaKnown RBP16.15■□□□□ 0.18
ABCF2-201ENST00000222388 COL16A1Q07092 1604 aaPredicted RBP16.14■□□□□ 0.17
ABCF2-201ENST00000222388 LTV1Q96GA3 475 aaPredicted RBP16.14■□□□□ 0.17
ABCF2-201ENST00000222388 RGPD5Q99666 1765 aa16.14■□□□□ 0.17
ABCF2-201ENST00000222388 PRKCSHP14314 528 aaPredicted RBP16.14■□□□□ 0.17
ABCF2-201ENST00000222388 IP6K1Q92551 441 aa16.14■□□□□ 0.17
ABCF2-201ENST00000222388 GNAI1P63096 354 aa16.12■□□□□ 0.17
ABCF2-201ENST00000222388 IFT57Q9NWB7 429 aa16.12■□□□□ 0.17
ABCF2-201ENST00000222388 RGPD1P0DJD0 1748 aa16.12■□□□□ 0.17
ABCF2-201ENST00000222388 KIAA0232Q92628 1395 aa16.12■□□□□ 0.17
ABCF2-201ENST00000222388 VAMP4O75379 141 aa16.11■□□□□ 0.17
ABCF2-201ENST00000222388 THUMPD2Q9BTF0 503 aaKnown RBP16.11■□□□□ 0.17
ABCF2-201ENST00000222388 CHRNA2Q15822 529 aa16.11■□□□□ 0.17
ABCF2-201ENST00000222388 SLKQ9H2G2 1235 aaPredicted RBP16.1■□□□□ 0.17
ABCF2-201ENST00000222388 RGPD2P0DJD1 1756 aa16.1■□□□□ 0.17
ABCF2-201ENST00000222388 MRPL50Q8N5N7 158 aaKnown RBP16.1■□□□□ 0.17
ABCF2-201ENST00000222388 ARHGAP45Q92619 1136 aa16.1■□□□□ 0.17
ABCF2-201ENST00000222388 TBC1D2Q9BYX2 928 aa16.1■□□□□ 0.17
ABCF2-201ENST00000222388 ZNF853P0CG23 659 aa16.09■□□□□ 0.17
ABCF2-201ENST00000222388 NUCB1Q02818 461 aa16.09■□□□□ 0.17
ABCF2-201ENST00000222388 LMOD3Q0VAK6 560 aa16.09■□□□□ 0.17
ABCF2-201ENST00000222388 SULT6B1Q6IMI4 303 aa16.09■□□□□ 0.17
ABCF2-201ENST00000222388 AEBP1Q8IUX7 1158 aa16.09■□□□□ 0.17
ABCF2-201ENST00000222388 CHMP4BQ9H444 224 aaKnown RBP16.09■□□□□ 0.17
ABCF2-201ENST00000222388 PRDM11Q9NQV5 511 aa16.09■□□□□ 0.17
ABCF2-201ENST00000222388 AXIN2Q9Y2T1 843 aa16.09■□□□□ 0.17
ABCF2-201ENST00000222388 COL22A1Q8NFW1 1626 aaPredicted RBP16.09■□□□□ 0.17
ABCF2-201ENST00000222388 TSPYL6Q8N831 410 aa16.09■□□□□ 0.17
ABCF2-201ENST00000222388 C22orf23Q9BZE7 217 aa16.09■□□□□ 0.17
ABCF2-201ENST00000222388 MBIPQ9NS73 344 aa16.09■□□□□ 0.17
ABCF2-201ENST00000222388 CPDO75976 1380 aa16.08■□□□□ 0.17
ABCF2-201ENST00000222388 COL18A1P39060 1754 aa16.08■□□□□ 0.16
ABCF2-201ENST00000222388 MFAP1P55081 439 aaKnown RBP16.08■□□□□ 0.16
ABCF2-201ENST00000222388 EYA1Q99502 592 aa16.08■□□□□ 0.16
ABCF2-201ENST00000222388 ANTXR1Q9H6X2 564 aa16.08■□□□□ 0.16
ABCF2-201ENST00000222388 ZBTB7BO15156 539 aaPredicted RBP16.07■□□□□ 0.16
ABCF2-201ENST00000222388 ANKRD24Q8TF21 1146 aa16.07■□□□□ 0.16
ABCF2-201ENST00000222388 CFAP44Q96MT7 982 aa16.07■□□□□ 0.16
ABCF2-201ENST00000222388 IGSF1Q8N6C5 1336 aa16.07■□□□□ 0.16
ABCF2-201ENST00000222388 CHD1LQ86WJ1 897 aa16.06■□□□□ 0.16
ABCF2-201ENST00000222388 ELL2O00472 640 aaPredicted RBP16.06■□□□□ 0.16
ABCF2-201ENST00000222388 TWISTNBQ3B726 338 aaPredicted RBP16.06■□□□□ 0.16
ABCF2-201ENST00000222388 USHBP1Q8N6Y0 703 aa16.06■□□□□ 0.16
ABCF2-201ENST00000222388 LNPKQ9C0E8 428 aa16.06■□□□□ 0.16
ABCF2-201ENST00000222388 ERBB3P21860 1342 aa16.05■□□□□ 0.16
ABCF2-201ENST00000222388 ABCC6O95255 1503 aa16.05■□□□□ 0.16
ABCF2-201ENST00000222388 IL27Q8NEV9 243 aa16.04■□□□□ 0.16
ABCF2-201ENST00000222388 ABCC4O15439 1325 aa16.04■□□□□ 0.16
ABCF2-201ENST00000222388 NBPF6Q5VWK0 638 aa16.04■□□□□ 0.16
ABCF2-201ENST00000222388 GCC1Q96CN9 775 aa16.04■□□□□ 0.16
ABCF2-201ENST00000222388 NBPF4Q96M43 638 aa16.04■□□□□ 0.16
ABCF2-201ENST00000222388 KDRP35968 1356 aa16.03■□□□□ 0.16
ABCF2-201ENST00000222388 LMO7Q8WWI1 1683 aa16.03■□□□□ 0.16
ABCF2-201ENST00000222388 FAM83GA6ND36 823 aa16.03■□□□□ 0.16
ABCF2-201ENST00000222388 CSB-PGBD3P0DP91 1061 aa16.03■□□□□ 0.16
ABCF2-201ENST00000222388 C8orf58Q8NAV2 365 aa16.03■□□□□ 0.16
ABCF2-201ENST00000222388 NUTM2BA6NNL0 878 aaPredicted RBP16.02■□□□□ 0.16
ABCF2-201ENST00000222388 NUTM2EB1AL46 878 aaPredicted RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms