RNA–Protein interactions for RNA: ENST00000222266.2

PSENEN-201, Transcript of presenilin enhancer, gamma-secretase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSENEN, Length 603 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSENEN-201ENST00000222266 DDX54Q8TDD1 881 aaKnown RBP13.54□□□□□ -0.24
PSENEN-201ENST00000222266 OVOS2A0A0G2JMS6 1433 aa13.54□□□□□ -0.24
PSENEN-201ENST00000222266 RGS12O14924 1447 aa13.54□□□□□ -0.24
PSENEN-201ENST00000222266 GLI3P10071 1580 aa13.54□□□□□ -0.24
PSENEN-201ENST00000222266 HMGB2P26583 209 aaKnown RBP13.53□□□□□ -0.24
PSENEN-201ENST00000222266 PEAK1Q9H792 1746 aa13.53□□□□□ -0.24
PSENEN-201ENST00000222266 HMOX1P09601 288 aa13.52□□□□□ -0.25
PSENEN-201ENST00000222266 IFNL2Q8IZJ0 200 aa13.52□□□□□ -0.25
PSENEN-201ENST00000222266 MRS2Q9HD23 443 aa13.52□□□□□ -0.25
PSENEN-201ENST00000222266 MAPK8IP3Q9UPT6 1336 aa13.52□□□□□ -0.25
PSENEN-201ENST00000222266 RGPD5Q99666 1765 aa13.52□□□□□ -0.25
PSENEN-201ENST00000222266 TNS2Q63HR2 1409 aa13.51□□□□□ -0.25
PSENEN-201ENST00000222266 GAS2L2Q8NHY3 880 aa13.51□□□□□ -0.25
PSENEN-201ENST00000222266 DISP2A7MBM2 1401 aa13.5□□□□□ -0.25
PSENEN-201ENST00000222266 KDRP35968 1356 aa13.5□□□□□ -0.25
PSENEN-201ENST00000222266 ZNF530Q6P9A1 599 aaPredicted RBP13.49□□□□□ -0.25
PSENEN-201ENST00000222266 NCAPD2Q15021 1401 aa13.48□□□□□ -0.25
PSENEN-201ENST00000222266 PRKAR2BP31323 418 aa13.48□□□□□ -0.25
PSENEN-201ENST00000222266 RTF1Q92541 710 aaKnown RBP13.48□□□□□ -0.25
PSENEN-201ENST00000222266 AKAP4Q5JQC9 854 aa13.47□□□□□ -0.25
PSENEN-201ENST00000222266 ILDR2Q71H61 639 aa13.47□□□□□ -0.25
PSENEN-201ENST00000222266 AEBP1Q8IUX7 1158 aa13.47□□□□□ -0.25
PSENEN-201ENST00000222266 MARCH10Q8NA82 808 aaPredicted RBP13.47□□□□□ -0.25
PSENEN-201ENST00000222266 DCAF5Q96JK2 942 aa13.47□□□□□ -0.25
PSENEN-201ENST00000222266 THSD7AQ9UPZ6 1657 aa13.47□□□□□ -0.25
PSENEN-201ENST00000222266 CCER2I3L3R5 266 aa13.46□□□□□ -0.25
PSENEN-201ENST00000222266 LMOD3Q0VAK6 560 aa13.46□□□□□ -0.25
PSENEN-201ENST00000222266 SYTL4Q96C24 671 aaPredicted RBP13.46□□□□□ -0.25
PSENEN-201ENST00000222266 RSPH6AQ9H0K4 717 aa13.46□□□□□ -0.25
PSENEN-201ENST00000222266 PARP4Q9UKK3 1724 aaKnown RBP13.46□□□□□ -0.25
PSENEN-201ENST00000222266 COL3A1P02461 1466 aaPredicted RBP13.46□□□□□ -0.25
PSENEN-201ENST00000222266 MEGF6O75095 1541 aa13.45□□□□□ -0.26
PSENEN-201ENST00000222266 PHKG2P15735 406 aa13.45□□□□□ -0.26
PSENEN-201ENST00000222266 BAG6P46379 1132 aa13.45□□□□□ -0.26
PSENEN-201ENST00000222266 BCL11BQ9C0K0 894 aaPredicted RBP13.45□□□□□ -0.26
PSENEN-201ENST00000222266 BCL9O00512 1426 aa13.45□□□□□ -0.26
PSENEN-201ENST00000222266 GNAT3A8MTJ3 354 aa13.44□□□□□ -0.26
PSENEN-201ENST00000222266 SOCS7O14512 581 aa13.44□□□□□ -0.26
PSENEN-201ENST00000222266 RUNDC1Q96C34 613 aa13.44□□□□□ -0.26
PSENEN-201ENST00000222266 ERVV-2B6SEH9 535 aa13.43□□□□□ -0.26
PSENEN-201ENST00000222266 HTATSF1O43719 755 aaKnown RBP13.43□□□□□ -0.26
PSENEN-201ENST00000222266 TRIM37O94972 964 aa13.43□□□□□ -0.26
PSENEN-201ENST00000222266 NKX1-1Q15270 411 aaPredicted RBP13.43□□□□□ -0.26
PSENEN-201ENST00000222266 FAM182BQ5T319 152 aa13.43□□□□□ -0.26
PSENEN-201ENST00000222266 CYP27B1O15528 508 aa13.42□□□□□ -0.26
PSENEN-201ENST00000222266 APBA3O96018 575 aa13.42□□□□□ -0.26
PSENEN-201ENST00000222266 CABP4P57796 275 aa13.42□□□□□ -0.26
PSENEN-201ENST00000222266 TEFQ10587 303 aa13.42□□□□□ -0.26
PSENEN-201ENST00000222266 MTHFSDQ2M296 383 aaKnown RBP13.42□□□□□ -0.26
PSENEN-201ENST00000222266 TMOD3Q9NYL9 352 aa13.42□□□□□ -0.26
PSENEN-201ENST00000222266 ADAMTS8Q9UP79 889 aa13.42□□□□□ -0.26
PSENEN-201ENST00000222266 CALD1Q05682 793 aaKnown RBP13.41□□□□□ -0.26
PSENEN-201ENST00000222266 SMARCC1Q92922 1105 aaPredicted RBP13.41□□□□□ -0.26
PSENEN-201ENST00000222266 ACSBG1Q96GR2 724 aa13.41□□□□□ -0.26
PSENEN-201ENST00000222266 LRRC37A3O60309 1634 aa13.41□□□□□ -0.26
PSENEN-201ENST00000222266 PRIM1P49642 420 aaKnown RBP13.4□□□□□ -0.26
PSENEN-201ENST00000222266 NFE2L2Q16236 605 aa13.4□□□□□ -0.26
PSENEN-201ENST00000222266 NGEFQ8N5V2 710 aa13.4□□□□□ -0.26
PSENEN-201ENST00000222266 PNISRQ8TF01 805 aaKnown RBP13.4□□□□□ -0.26
PSENEN-201ENST00000222266 UPF1Q92900 1129 aaKnown RBP eCLIP13.4□□□□□ -0.26
PSENEN-201ENST00000222266 MAP3K5Q99683 1374 aa13.4□□□□□ -0.26
PSENEN-201ENST00000222266 RGPD1P0DJD0 1748 aa13.39□□□□□ -0.27
PSENEN-201ENST00000222266 WNK3Q9BYP7 1800 aa13.39□□□□□ -0.27
PSENEN-201ENST00000222266 MPRIPQ6WCQ1 1025 aa13.39□□□□□ -0.27
PSENEN-201ENST00000222266 FAM9BQ8IZU0 186 aa13.39□□□□□ -0.27
PSENEN-201ENST00000222266 RGPD2P0DJD1 1756 aa13.39□□□□□ -0.27
PSENEN-201ENST00000222266 RIPK4P57078 832 aa13.38□□□□□ -0.27
PSENEN-201ENST00000222266 PHACTR3Q96KR7 559 aa13.38□□□□□ -0.27
PSENEN-201ENST00000222266 PLEKHF1Q96S99 279 aa13.38□□□□□ -0.27
PSENEN-201ENST00000222266 PLSCR1O15162 318 aa13.37□□□□□ -0.27
PSENEN-201ENST00000222266 RNMTO43148 476 aaKnown RBP13.37□□□□□ -0.27
PSENEN-201ENST00000222266 NBPF14Q5TI25 921 aa13.36□□□□□ -0.27
PSENEN-201ENST00000222266 CCDC146Q8IYE0 955 aa13.36□□□□□ -0.27
PSENEN-201ENST00000222266 TTC5Q8N0Z6 440 aa13.36□□□□□ -0.27
PSENEN-201ENST00000222266 BRWD3Q6RI45 1802 aa13.36□□□□□ -0.27
PSENEN-201ENST00000222266 PKD1L3Q7Z443 1732 aa13.36□□□□□ -0.27
PSENEN-201ENST00000222266 TMPOP42166 694 aaKnown RBP13.35□□□□□ -0.27
PSENEN-201ENST00000222266 NEUROD2Q15784 382 aa13.35□□□□□ -0.27
PSENEN-201ENST00000222266 SLC27A3Q5K4L6 730 aa13.35□□□□□ -0.27
PSENEN-201ENST00000222266 MIER1Q8N108 512 aa13.35□□□□□ -0.27
PSENEN-201ENST00000222266 SLC52A2Q9HAB3 445 aa13.35□□□□□ -0.27
PSENEN-201ENST00000222266 KCNQ2O43526 872 aa13.34□□□□□ -0.27
PSENEN-201ENST00000222266 NCBP3Q53F19 620 aaKnown RBP13.34□□□□□ -0.27
PSENEN-201ENST00000222266 NFATC2IPQ8NCF5 419 aa13.34□□□□□ -0.27
PSENEN-201ENST00000222266 APAF1O14727 1248 aa13.33□□□□□ -0.28
PSENEN-201ENST00000222266 PIGBQ92521 554 aa13.33□□□□□ -0.28
PSENEN-201ENST00000222266 BTBD11A6QL63 1104 aa13.32□□□□□ -0.28
PSENEN-201ENST00000222266 TAF7Q15545 349 aaPredicted RBP13.32□□□□□ -0.28
PSENEN-201ENST00000222266 CCDC184Q52MB2 194 aa13.32□□□□□ -0.28
PSENEN-201ENST00000222266 CHMP4AQ9BY43 222 aa13.32□□□□□ -0.28
PSENEN-201ENST00000222266 LGR6Q9HBX8 967 aa13.32□□□□□ -0.28
PSENEN-201ENST00000222266 BABAM1Q9NWV8 329 aa13.32□□□□□ -0.28
PSENEN-201ENST00000222266 EN1Q05925 392 aaPredicted RBP13.31□□□□□ -0.28
PSENEN-201ENST00000222266 MCM10Q7L590 875 aa13.31□□□□□ -0.28
PSENEN-201ENST00000222266 IL17REQ8NFR9 667 aa13.3□□□□□ -0.28
PSENEN-201ENST00000222266 RBM42Q9BTD8 480 aaKnown RBP13.3□□□□□ -0.28
PSENEN-201ENST00000222266 TEX13AQ9BXU3 409 aaPredicted RBP13.3□□□□□ -0.28
PSENEN-201ENST00000222266 CCNL1Q9UK58 526 aaPredicted RBP13.3□□□□□ -0.28
PSENEN-201ENST00000222266 PALLDQ8WX93 1383 aa13.3□□□□□ -0.28
PSENEN-201ENST00000222266 TXNRD1Q16881 649 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms