RNA–Protein interactions for RNA: ENST00000221996.11

CRX-201, Transcript of cone-rod homeobox, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CRX, Length 4,470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-201ENST00000221996 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.91□□□□□ -0.5
CRX-201ENST00000221996 EDC4Q6P2E9 1401 aaKnown RBP11.91□□□□□ -0.5
CRX-201ENST00000221996 PTPRCP08575 1304 aa11.91□□□□□ -0.5
CRX-201ENST00000221996 BTBD11A6QL63 1104 aa11.91□□□□□ -0.5
CRX-201ENST00000221996 SRGAP3O43295 1099 aa11.91□□□□□ -0.5
CRX-201ENST00000221996 TBC1D9Q6ZT07 1266 aa11.91□□□□□ -0.5
CRX-201ENST00000221996 FLIIQ13045 1269 aa11.9□□□□□ -0.5
CRX-201ENST00000221996 MEIS3Q99687 375 aa11.9□□□□□ -0.5
CRX-201ENST00000221996 POLR1AO95602 1720 aaPredicted RBP11.9□□□□□ -0.5
CRX-201ENST00000221996 TTC21AQ8NDW8 1320 aa11.9□□□□□ -0.5
CRX-201ENST00000221996 NCBP3Q53F19 620 aaKnown RBP11.9□□□□□ -0.5
CRX-201ENST00000221996 KCNH5Q8NCM2 988 aa11.9□□□□□ -0.5
CRX-201ENST00000221996 MAP4K4O95819 1239 aaPredicted RBP11.9□□□□□ -0.51
CRX-201ENST00000221996 HSP90B1P14625 803 aaKnown RBP11.9□□□□□ -0.51
CRX-201ENST00000221996 ZKSCAN1P17029 563 aaPredicted RBP11.9□□□□□ -0.51
CRX-201ENST00000221996 EVA1CP58658 441 aa11.9□□□□□ -0.51
CRX-201ENST00000221996 PLEKHF1Q96S99 279 aa11.9□□□□□ -0.51
CRX-201ENST00000221996 MTHFSDQ2M296 383 aaKnown RBP11.89□□□□□ -0.51
CRX-201ENST00000221996 CNTROBQ8N137 903 aa11.89□□□□□ -0.51
CRX-201ENST00000221996 ABCA9Q8IUA7 1624 aa11.89□□□□□ -0.51
CRX-201ENST00000221996 MAP3K19Q56UN5 1328 aa11.89□□□□□ -0.51
CRX-201ENST00000221996 MPRIPQ6WCQ1 1025 aa11.88□□□□□ -0.51
CRX-201ENST00000221996 ZBTB7BO15156 539 aaPredicted RBP11.88□□□□□ -0.51
CRX-201ENST00000221996 TATP17735 454 aaPredicted RBP11.88□□□□□ -0.51
CRX-201ENST00000221996 LRRFIP2Q9Y608 721 aaKnown RBP11.88□□□□□ -0.51
CRX-201ENST00000221996 EYA1Q99502 592 aa11.87□□□□□ -0.51
CRX-201ENST00000221996 METP08581 1390 aa11.87□□□□□ -0.51
CRX-201ENST00000221996 NUTM1Q86Y26 1132 aa11.87□□□□□ -0.51
CRX-201ENST00000221996 CIZ1Q9ULV3 898 aaPredicted RBP11.87□□□□□ -0.51
CRX-201ENST00000221996 LAMC1P11047 1609 aa11.87□□□□□ -0.51
CRX-201ENST00000221996 ABCA6Q8N139 1617 aa11.87□□□□□ -0.51
CRX-201ENST00000221996 KCNA6P17658 529 aa11.86□□□□□ -0.51
CRX-201ENST00000221996 MX1P20591 662 aa11.86□□□□□ -0.51
CRX-201ENST00000221996 ANKRD44Q8N8A2 993 aa11.86□□□□□ -0.51
CRX-201ENST00000221996 MYL6BP14649 208 aa11.86□□□□□ -0.51
CRX-201ENST00000221996 C16orf71Q8IYS4 520 aaPredicted RBP11.86□□□□□ -0.51
CRX-201ENST00000221996 LTKP29376 864 aa11.86□□□□□ -0.51
CRX-201ENST00000221996 MRE11P49959 708 aa11.86□□□□□ -0.51
CRX-201ENST00000221996 FLT4P35916 1363 aa11.86□□□□□ -0.51
CRX-201ENST00000221996 TBX22Q9Y458 520 aa11.86□□□□□ -0.51
CRX-201ENST00000221996 TSHZ3Q63HK5 1081 aa11.85□□□□□ -0.51
CRX-201ENST00000221996 SIL1Q9H173 461 aa11.85□□□□□ -0.51
CRX-201ENST00000221996 TTC22Q5TAA0 569 aa11.85□□□□□ -0.51
CRX-201ENST00000221996 SMC3Q9UQE7 1217 aa11.85□□□□□ -0.51
CRX-201ENST00000221996 TMEM2Q9UHN6 1383 aa11.85□□□□□ -0.51
CRX-201ENST00000221996 NPHP1O15259 732 aa11.84□□□□□ -0.51
CRX-201ENST00000221996 MCM2P49736 904 aa11.84□□□□□ -0.51
CRX-201ENST00000221996 ATP6V1DQ9Y5K8 247 aa11.84□□□□□ -0.51
CRX-201ENST00000221996 ARHGAP31Q2M1Z3 1444 aa11.84□□□□□ -0.51
CRX-201ENST00000221996 INO80Q9ULG1 1556 aaPredicted RBP11.84□□□□□ -0.51
CRX-201ENST00000221996 PRPF40AO75400 957 aaKnown RBP11.84□□□□□ -0.51
CRX-201ENST00000221996 ANXA1P04083 346 aa11.84□□□□□ -0.51
CRX-201ENST00000221996 CSPP1Q1MSJ5 1256 aa11.84□□□□□ -0.51
CRX-201ENST00000221996 CAVIN1Q6NZI2 390 aaKnown RBP11.84□□□□□ -0.51
CRX-201ENST00000221996 ADGRB3O60242 1522 aa11.84□□□□□ -0.51
CRX-201ENST00000221996 PHF14O94880 888 aa11.84□□□□□ -0.51
CRX-201ENST00000221996 FSD1Q9BTV5 496 aa11.84□□□□□ -0.51
CRX-201ENST00000221996 NEUROD6Q96NK8 337 aa11.84□□□□□ -0.51
CRX-201ENST00000221996 CEP152O94986 1710 aa11.83□□□□□ -0.52
CRX-201ENST00000221996 VPS37CA5D8V6 355 aaPredicted RBP11.83□□□□□ -0.52
CRX-201ENST00000221996 RNF20Q5VTR2 975 aa11.83□□□□□ -0.52
CRX-201ENST00000221996 DCTPP1Q9H773 170 aa11.83□□□□□ -0.52
CRX-201ENST00000221996 ERC1Q8IUD2 1116 aa11.83□□□□□ -0.52
CRX-201ENST00000221996 DNAAF4Q8WXU2 420 aa11.83□□□□□ -0.52
CRX-201ENST00000221996 PPRC1Q5VV67 1664 aaKnown RBP11.82□□□□□ -0.52
CRX-201ENST00000221996 SDSP20132 328 aa11.82□□□□□ -0.52
CRX-201ENST00000221996 GLIPR1L2Q4G1C9 344 aa11.82□□□□□ -0.52
CRX-201ENST00000221996 AMOTQ4VCS5 1084 aa11.82□□□□□ -0.52
CRX-201ENST00000221996 CEP85Q6P2H3 762 aa11.82□□□□□ -0.52
CRX-201ENST00000221996 CWC22Q9HCG8 908 aaKnown RBP11.82□□□□□ -0.52
CRX-201ENST00000221996 SPG7Q9UQ90 795 aa11.82□□□□□ -0.52
CRX-201ENST00000221996 CHL1O00533 1208 aa11.82□□□□□ -0.52
CRX-201ENST00000221996 KIF1BPQ96EK5 621 aa11.82□□□□□ -0.52
CRX-201ENST00000221996 RBM42Q9BTD8 480 aaKnown RBP11.82□□□□□ -0.52
CRX-201ENST00000221996 UPF3BQ9BZI7 483 aaKnown RBP11.82□□□□□ -0.52
CRX-201ENST00000221996 PLEKHG3A1L390 1219 aa11.82□□□□□ -0.52
CRX-201ENST00000221996 PI4KAP2A4QPH2 592 aa11.82□□□□□ -0.52
CRX-201ENST00000221996 CWC27Q6UX04 472 aaKnown RBP11.82□□□□□ -0.52
CRX-201ENST00000221996 DRC7Q8IY82 874 aa11.82□□□□□ -0.52
CRX-201ENST00000221996 PI4KAP1Q8N8J0 262 aa11.82□□□□□ -0.52
CRX-201ENST00000221996 G2E3Q7L622 706 aa11.82□□□□□ -0.52
CRX-201ENST00000221996 LMTK2Q8IWU2 1503 aa11.81□□□□□ -0.52
CRX-201ENST00000221996 HTATSF1O43719 755 aaKnown RBP11.81□□□□□ -0.52
CRX-201ENST00000221996 AACSQ86V21 672 aa11.81□□□□□ -0.52
CRX-201ENST00000221996 TNPO1Q92973 898 aaKnown RBP11.81□□□□□ -0.52
CRX-201ENST00000221996 SYTL4Q96C24 671 aaPredicted RBP11.81□□□□□ -0.52
CRX-201ENST00000221996 CABP4P57796 275 aa11.81□□□□□ -0.52
CRX-201ENST00000221996 SIRT1Q96EB6 747 aa11.81□□□□□ -0.52
CRX-201ENST00000221996 GLI2P10070 1586 aa11.81□□□□□ -0.52
CRX-201ENST00000221996 H3BQV1 296 aa11.8□□□□□ -0.52
CRX-201ENST00000221996 SSFA2P28290 1259 aa11.8□□□□□ -0.52
CRX-201ENST00000221996 HOXC9P31274 260 aa11.8□□□□□ -0.52
CRX-201ENST00000221996 IFFO2Q5TF58 517 aa11.8□□□□□ -0.52
CRX-201ENST00000221996 FAM184AQ8NB25 1140 aa11.8□□□□□ -0.52
CRX-201ENST00000221996 DBF4Q9UBU7 674 aaPredicted RBP11.8□□□□□ -0.52
CRX-201ENST00000221996 NASPP49321 788 aaPredicted RBP11.8□□□□□ -0.52
CRX-201ENST00000221996 KRT28Q7Z3Y7 464 aa11.8□□□□□ -0.52
CRX-201ENST00000221996 PPP1R42Q7Z4L9 355 aa11.8□□□□□ -0.52
CRX-201ENST00000221996 PLEKHM2Q8IWE5 1019 aa11.8□□□□□ -0.52
CRX-201ENST00000221996 STRN4Q9NRL3 753 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms