RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 TRHP20396 242 aaPredicted RBP19.08■□□□□ 0.65
TGFB1-201ENST00000221930 EIF4A2Q14240 407 aaKnown RBP19.08■□□□□ 0.65
TGFB1-201ENST00000221930 RBM25P49756 843 aaKnown RBP19.08■□□□□ 0.64
TGFB1-201ENST00000221930 MCM10Q7L590 875 aa19.08■□□□□ 0.64
TGFB1-201ENST00000221930 CHMP4BQ9H444 224 aaKnown RBP19.08■□□□□ 0.64
TGFB1-201ENST00000221930 MCM4P33991 863 aa19.07■□□□□ 0.64
TGFB1-201ENST00000221930 PDE4CQ08493 712 aa19.07■□□□□ 0.64
TGFB1-201ENST00000221930 GZF1Q9H116 711 aaPredicted RBP19.07■□□□□ 0.64
TGFB1-201ENST00000221930 CHMP5Q9NZZ3 219 aa19.07■□□□□ 0.64
TGFB1-201ENST00000221930 API5Q9BZZ5 524 aaKnown RBP19.06■□□□□ 0.64
TGFB1-201ENST00000221930 SSH2Q76I76 1423 aa19.05■□□□□ 0.64
TGFB1-201ENST00000221930 HSP90AB2PQ58FF8 381 aa19.05■□□□□ 0.64
TGFB1-201ENST00000221930 TBC1D9Q6ZT07 1266 aa19.05■□□□□ 0.64
TGFB1-201ENST00000221930 CEBPAP49715 358 aaPredicted RBP19.05■□□□□ 0.64
TGFB1-201ENST00000221930 ACEP12821 1306 aa19.05■□□□□ 0.64
TGFB1-201ENST00000221930 TTC21BQ7Z4L5 1316 aa19.04■□□□□ 0.64
TGFB1-201ENST00000221930 OVOS2A0A0J9YW53 1432 aa19.04■□□□□ 0.64
TGFB1-201ENST00000221930 USP6P35125 1406 aa19.04■□□□□ 0.64
TGFB1-201ENST00000221930 OVOS2Q6IE36 1432 aa19.04■□□□□ 0.64
TGFB1-201ENST00000221930 A0A0U1RQG5 324 aaPredicted RBP19.04■□□□□ 0.64
TGFB1-201ENST00000221930 TTC21AQ8NDW8 1320 aa19.03■□□□□ 0.64
TGFB1-201ENST00000221930 KIF2CQ99661 725 aa19.03■□□□□ 0.64
TGFB1-201ENST00000221930 USP31Q70CQ4 1352 aa19.02■□□□□ 0.64
TGFB1-201ENST00000221930 CD2BP2O95400 341 aaKnown RBP19.02■□□□□ 0.63
TGFB1-201ENST00000221930 RBM42Q9BTD8 480 aaKnown RBP19.02■□□□□ 0.63
TGFB1-201ENST00000221930 MIS18AQ9NYP9 233 aa19.02■□□□□ 0.63
TGFB1-201ENST00000221930 FOXD4L1Q9NU39 408 aa19.01■□□□□ 0.63
TGFB1-201ENST00000221930 AMOTL2Q9Y2J4 779 aa19.01■□□□□ 0.63
TGFB1-201ENST00000221930 C16orf71Q8IYS4 520 aaPredicted RBP19.01■□□□□ 0.63
TGFB1-201ENST00000221930 SLC26A8Q96RN1 970 aa19.01■□□□□ 0.63
TGFB1-201ENST00000221930 HSP90AB1P08238 724 aaKnown RBP19■□□□□ 0.63
TGFB1-201ENST00000221930 APBB1O00213 710 aa18.99■□□□□ 0.63
TGFB1-201ENST00000221930 GSPT1P15170 499 aaKnown RBP18.99■□□□□ 0.63
TGFB1-201ENST00000221930 SNX21Q969T3 373 aa18.99■□□□□ 0.63
TGFB1-201ENST00000221930 NWD1Q149M9 1564 aa18.99■□□□□ 0.63
TGFB1-201ENST00000221930 CHL1O00533 1208 aa18.99■□□□□ 0.63
TGFB1-201ENST00000221930 TRAK2O60296 914 aa18.98■□□□□ 0.63
TGFB1-201ENST00000221930 RGPD1P0DJD0 1748 aa18.98■□□□□ 0.63
TGFB1-201ENST00000221930 FOXO3O43524 673 aa18.98■□□□□ 0.63
TGFB1-201ENST00000221930 PLEKHM2Q8IWE5 1019 aa18.98■□□□□ 0.63
TGFB1-201ENST00000221930 INTS3Q68E01 1043 aaKnown RBP18.98■□□□□ 0.63
TGFB1-201ENST00000221930 OTUD7AQ8TE49 926 aaPredicted RBP18.97■□□□□ 0.63
TGFB1-201ENST00000221930 DCTPP1Q9H773 170 aa18.97■□□□□ 0.63
TGFB1-201ENST00000221930 KIF24Q5T7B8 1368 aa18.97■□□□□ 0.63
TGFB1-201ENST00000221930 HSP90AA1P07900 732 aaKnown RBP18.97■□□□□ 0.63
TGFB1-201ENST00000221930 DDIT3P35638 169 aa18.97■□□□□ 0.63
TGFB1-201ENST00000221930 NCOA3Q9Y6Q9 1424 aa18.96■□□□□ 0.63
TGFB1-201ENST00000221930 CDC45O75419 566 aa18.95■□□□□ 0.62
TGFB1-201ENST00000221930 ANKLE2Q86XL3 938 aa18.95■□□□□ 0.62
TGFB1-201ENST00000221930 RGPD8O14715 1765 aaPredicted RBP18.95■□□□□ 0.62
TGFB1-201ENST00000221930 SLC4A2P04920 1241 aa18.95■□□□□ 0.62
TGFB1-201ENST00000221930 TNPO1Q92973 898 aaKnown RBP18.95■□□□□ 0.62
TGFB1-201ENST00000221930 MEIS3Q99687 375 aa18.95■□□□□ 0.62
TGFB1-201ENST00000221930 RGS12O14924 1447 aa18.95■□□□□ 0.62
TGFB1-201ENST00000221930 SMARCA5O60264 1052 aaPredicted RBP18.94■□□□□ 0.62
TGFB1-201ENST00000221930 L1TD1Q5T7N2 865 aaKnown RBP18.94■□□□□ 0.62
TGFB1-201ENST00000221930 MSH6P52701 1360 aa18.94■□□□□ 0.62
TGFB1-201ENST00000221930 ANKRD44Q8N8A2 993 aa18.94■□□□□ 0.62
TGFB1-201ENST00000221930 GOLGA6L3A6NEY3 463 aa18.93■□□□□ 0.62
TGFB1-201ENST00000221930 CEP85Q6P2H3 762 aa18.93■□□□□ 0.62
TGFB1-201ENST00000221930 MAP3K19Q56UN5 1328 aa18.93■□□□□ 0.62
TGFB1-201ENST00000221930 XRCC6P12956 609 aaKnown RBP eCLIP18.93■□□□□ 0.62
TGFB1-201ENST00000221930 ATP10DQ9P241 1426 aa18.92■□□□□ 0.62
TGFB1-201ENST00000221930 PIK3C2AO00443 1686 aa18.92■□□□□ 0.62
TGFB1-201ENST00000221930 PDIA4P13667 645 aaKnown RBP18.92■□□□□ 0.62
TGFB1-201ENST00000221930 MTHFSDQ2M296 383 aaKnown RBP18.92■□□□□ 0.62
TGFB1-201ENST00000221930 SLC4A10Q6U841 1118 aa18.92■□□□□ 0.62
TGFB1-201ENST00000221930 F6X3S4 739 aa18.92■□□□□ 0.62
TGFB1-201ENST00000221930 TTC22Q5TAA0 569 aa18.92■□□□□ 0.62
TGFB1-201ENST00000221930 PANK2Q9BZ23 570 aa18.92■□□□□ 0.62
TGFB1-201ENST00000221930 PEAK1Q9H792 1746 aa18.91■□□□□ 0.62
TGFB1-201ENST00000221930 K7ELQ4 463 aaPredicted RBP18.91■□□□□ 0.62
TGFB1-201ENST00000221930 HAP1P54257 671 aaPredicted RBP18.91■□□□□ 0.62
TGFB1-201ENST00000221930 G2E3Q7L622 706 aa18.91■□□□□ 0.62
TGFB1-201ENST00000221930 MARF1Q9Y4F3 1742 aaKnown RBP18.91■□□□□ 0.62
TGFB1-201ENST00000221930 RTL1A6NKG5 1358 aa18.9■□□□□ 0.62
TGFB1-201ENST00000221930 DDX11L8A8MPP1 907 aa18.9■□□□□ 0.62
TGFB1-201ENST00000221930 RPAP2Q8IXW5 612 aaPredicted RBP18.9■□□□□ 0.62
TGFB1-201ENST00000221930 TSPYL4Q9UJ04 414 aa18.9■□□□□ 0.62
TGFB1-201ENST00000221930 KIAA0232Q92628 1395 aa18.9■□□□□ 0.62
TGFB1-201ENST00000221930 FSD2A1L4K1 749 aa18.89■□□□□ 0.62
TGFB1-201ENST00000221930 GAS2L2Q8NHY3 880 aa18.89■□□□□ 0.62
TGFB1-201ENST00000221930 RTF1Q92541 710 aaKnown RBP18.89■□□□□ 0.62
TGFB1-201ENST00000221930 CRB1P82279 1406 aa18.89■□□□□ 0.61
TGFB1-201ENST00000221930 ADGRL3Q9HAR2 1447 aa18.89■□□□□ 0.61
TGFB1-201ENST00000221930 NGDNQ8NEJ9 315 aaKnown RBP18.88■□□□□ 0.61
TGFB1-201ENST00000221930 PTPRCP08575 1304 aa18.88■□□□□ 0.61
TGFB1-201ENST00000221930 NPHP4O75161 1426 aaPredicted RBP18.88■□□□□ 0.61
TGFB1-201ENST00000221930 RAB3GAP1Q15042 981 aa18.88■□□□□ 0.61
TGFB1-201ENST00000221930 RRAGDQ9NQL2 400 aaPredicted RBP18.88■□□□□ 0.61
TGFB1-201ENST00000221930 PHRF1Q9P1Y6 1649 aaKnown RBP18.88■□□□□ 0.61
TGFB1-201ENST00000221930 SDSP20132 328 aa18.87■□□□□ 0.61
TGFB1-201ENST00000221930 AMPHP49418 695 aa18.87■□□□□ 0.61
TGFB1-201ENST00000221930 NUTM2GQ5VZR2 741 aa18.87■□□□□ 0.61
TGFB1-201ENST00000221930 EYA1Q99502 592 aa18.87■□□□□ 0.61
TGFB1-201ENST00000221930 CIZ1Q9ULV3 898 aaPredicted RBP18.87■□□□□ 0.61
TGFB1-201ENST00000221930 NECTIN2Q92692 538 aa18.86■□□□□ 0.61
TGFB1-201ENST00000221930 ARHGEF10O15013 1369 aa18.86■□□□□ 0.61
TGFB1-201ENST00000221930 SBNO1A3KN83 1393 aa18.85■□□□□ 0.61
TGFB1-201ENST00000221930 GBP4Q96PP9 640 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms